Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 2.9e-79 298.5 154 100.0
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 5.8e-27 124.8 79 77.2
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 7.6e-27 124.4 80 77.5
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.2e-26 122.9 79 74.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 1.4e-25 120.2 80 76.2
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 2.2e-18 96.3 75 64.0
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 4.9e-18 95.1 58 72.4
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 1.4e-17 93.6 79 63.3
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 1.9e-17 93.2 96 58.3
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 9.3e-17 90.9 67 65.7
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 2.1e-16 89.7 58 72.4
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 3.5e-16 89.0 63 71.4
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 4.6e-16 88.6 58 74.1
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 4.6e-16 88.6 108 48.1
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 6.0e-16 88.2 58 70.7
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 6.0e-16 88.2 79 58.2
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.0e-16 88.2 90 52.2
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 6.0e-16 88.2 79 55.7
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 7.9e-16 87.8 58 74.1
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 7.9e-16 87.8 79 59.5
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.0e-15 87.4 58 74.1
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.0e-15 87.4 58 74.1
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.3e-15 87.0 58 70.7
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 1.3e-15 87.0 58 72.4
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 3.0e-15 85.9 74 56.8
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 3.0e-15 85.9 71 56.3
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.9e-15 85.5 58 74.1
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 5.1e-15 85.1 70 64.3
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 5.1e-15 85.1 70 64.3
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 5.1e-15 85.1 70 64.3
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 5.1e-15 85.1 63 69.8
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 6.6e-15 84.7 74 62.2
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 6.6e-15 84.7 58 72.4
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 8.7e-15 84.3 52 76.9
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 8.7e-15 84.3 58 70.7
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 8.7e-15 84.3 58 72.4
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 8.7e-15 84.3 74 59.5
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 8.7e-15 84.3 58 70.7
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.1e-14 84.0 70 65.7
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 1.1e-14 84.0 73 60.3
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.1e-14 84.0 52 76.9
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.1e-14 84.0 79 57.0
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 1.1e-14 84.0 58 72.4
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 1.1e-14 84.0 58 74.1
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 1.1e-14 84.0 58 74.1
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 1.1e-14 84.0 58 74.1
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 1.5e-14 83.6 75 58.7
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 2.5e-14 82.8 64 62.5
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.5e-14 82.8 58 72.4
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 3.3e-14 82.4 67 61.2
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.3e-14 82.0 58 72.4
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 5.6e-14 81.6 79 57.0
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 5.6e-14 81.6 58 69.0
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 5.6e-14 81.6 52 78.8
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 7.3e-14 81.3 50 78.0
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 7.3e-14 81.3 50 78.0
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 7.3e-14 81.3 63 65.1
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.3e-13 80.5 51 70.6
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.3e-13 80.5 56 69.6
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.6e-13 80.1 53 71.7
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 2.8e-13 79.3 68 54.4
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 2.8e-13 79.3 54 75.9
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.8e-13 78.6 84 53.6
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 4.8e-13 78.6 84 52.4
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 6.2e-13 78.2 46 82.6
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 6.2e-13 78.2 73 56.2
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 8.1e-13 77.8 74 56.8
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 8.1e-13 77.8 65 58.5
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 8.1e-13 77.8 48 72.9
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 1.4e-12 77.0 60 65.0
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.4e-12 77.0 58 65.5
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 1.4e-12 77.0 46 80.4
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 1.4e-12 77.0 56 66.1
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.8e-12 76.6 44 81.8
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.8e-12 76.6 48 70.8
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 2.4e-12 76.3 46 80.4
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 2.4e-12 76.3 51 74.5
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 2.4e-12 76.3 47 78.7
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 2.4e-12 76.3 47 78.7
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 2.4e-12 76.3 47 76.6
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 3.1e-12 75.9 59 64.4
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 4.0e-12 75.5 59 64.4
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 4.0e-12 75.5 58 63.8
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 5.3e-12 75.1 47 74.5
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 5.3e-12 75.1 80 52.5
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 5.3e-12 75.1 80 52.5
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.2e-11 73.9 79 46.8
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 3.4e-11 72.4 63 54.0
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 4.5e-11 72.0 48 68.8
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 4.5e-11 72.0 44 79.5
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.7e-10 70.1 46 73.9
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 3.8e-10 68.9 43 74.4
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 4.9e-10 68.6 47 68.1
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 7.1e-09 64.7 70 52.9
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 3.5e-08 62.4 39 76.9
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 6.0e-08 61.6 70 51.4
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 6.7e-07 58.2 71 50.7
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.3e-06 55.5 38 71.1
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 9.6e-06 54.3 38 68.4


User provided reference genes

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