Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 1.9e-248 862.1 437 100.0
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 1.2e-114 417.5 536 48.7
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 3.6e-98 362.8 536 44.2
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 4.0e-97 359.4 536 44.0
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 8.0e-82 308.5 540 39.4
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 2.4e-78 297.0 548 37.8
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 7.0e-78 295.4 548 39.8
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 1.7e-76 290.8 546 37.4
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 1.1e-73 281.6 575 36.7
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 2.3e-73 280.4 536 37.5
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 5.2e-73 279.3 544 37.9
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 8.3e-71 271.9 566 35.2
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 2.4e-70 270.4 560 37.7
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 5.4e-70 269.2 518 37.1
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 9.2e-70 268.5 594 35.4
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 3.5e-69 266.5 553 34.5
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 3.5e-69 266.5 559 33.5
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 2.3e-68 263.8 548 35.6
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 5.1e-68 262.7 542 35.4
Gohir.D01G092700 Gossypium hirsutum HOM05D005833 ORTHO05D008135 8.6e-68 261.9 325 49.2
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.9e-67 260.8 552 34.2
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.5e-67 260.4 516 36.8
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 4.3e-67 259.6 537 36.7
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 2.3e-65 253.8 583 34.1
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 4.0e-65 253.1 551 32.8
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 5.2e-65 252.7 546 33.2
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 6.8e-65 252.3 535 35.7
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 8.9e-65 251.9 468 37.6
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 8.9e-65 251.9 545 33.4
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 1.5e-64 251.1 551 32.8
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 1.3e-63 248.1 546 32.4
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 1.7e-63 247.7 546 35.2
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 8.4e-63 245.4 539 35.1
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 1.2e-61 241.5 564 34.0
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 1.3e-60 238.0 587 31.0
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 1.3e-60 238.0 587 31.0
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 2.3e-60 237.3 564 34.0
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 5.1e-60 236.1 548 33.8
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 1.5e-59 234.6 547 32.7
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 1.5e-59 234.6 547 32.7
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 1.9e-59 234.2 546 32.2
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 5.6e-59 232.6 542 32.3
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 1.2e-58 231.5 551 33.6
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 1.6e-58 231.1 550 32.5
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 2.8e-58 230.3 562 33.8
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 6.2e-58 229.2 638 31.7
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 8.1e-58 228.8 390 38.2
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 1.4e-57 228.0 337 43.6
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 4.4e-56 223.0 554 32.1
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 5.8e-56 222.6 566 34.3
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 5.8e-56 222.6 550 31.6
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 2.2e-55 220.7 548 31.0
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 3.8e-55 219.9 551 31.6
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 3.8e-55 219.9 550 31.3
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 1.1e-54 218.4 549 30.8
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 1.9e-54 217.6 539 32.1
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 3.2e-54 216.9 544 31.2
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 4.2e-54 216.5 543 31.7
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 7.1e-54 215.7 550 30.2
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 9.3e-54 215.3 550 30.7
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 9.3e-54 215.3 536 31.5
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 7.8e-53 212.2 372 37.6
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 3.9e-52 209.9 372 37.9
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 3.9e-52 209.9 335 39.7
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 6.6e-52 209.1 540 31.3
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 8.7e-52 208.8 373 38.6
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 1.9e-51 207.6 385 38.2
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 1.9e-51 207.6 531 32.0
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 3.3e-51 206.8 536 30.4
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 6.2e-50 202.6 550 29.3
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 1.1e-49 201.8 541 31.1
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 1.1e-49 201.8 553 30.6
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 1.8e-49 201.1 337 38.0
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 3.1e-49 200.3 438 33.8
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 2.0e-48 197.6 354 37.3
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 1.3e-47 194.9 368 35.1
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 2.2e-47 194.1 529 30.8
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 2.2e-47 194.1 524 30.2
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 2.9e-47 193.7 563 31.1
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 2.9e-47 193.7 435 33.3
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 6.4e-47 192.6 354 35.6
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 1.4e-46 191.4 575 31.3
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 2.4e-46 190.7 348 36.2
Hma1.2p1_1100F.1_g257040 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 7.1e-46 189.1 361 39.1
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 1.7e-44 184.5 539 29.5
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 6.6e-44 182.6 336 37.2
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.1e-43 181.8 371 35.8
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 1.9e-43 181.0 367 33.2
Sed0015348 Sechium edule HOM05D005833 ORTHO05D008135 8.1e-42 175.6 361 37.1
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 3.4e-40 170.2 371 34.8
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 4.9e-39 166.4 328 33.5
AT1G76280 Arabidopsis thaliana HOM05D005833 ORTHO05D008135 3.2e-38 163.7 350 35.4
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 3.2e-38 163.7 361 31.6
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 1.1e-35 155.2 420 32.1
BcaC08g47270 Brassica carinata HOM05D005833 ORTHO05D008135 1.1e-35 155.2 336 35.7
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 6.9e-33 146.0 362 31.2
SalBow6G3625 Salvia bowleyana HOM05D005833 ORTHO05D008135 1.9e-30 137.9 345 32.5
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 5.1e-28 129.8 247 32.8
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 5.9e-24 116.3 122 50.8
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 1.0e-23 115.5 411 28.0
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 4.2e-22 110.2 376 27.1
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 5.5e-22 109.8 105 51.4
Lj8P589T22 Lonicera japonica HOM05D005833 ORTHO05D008135 1.6e-21 108.2 132 47.0
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 3.5e-21 107.1 122 50.8
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 3.5e-21 107.1 122 50.8
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 7.9e-21 105.9 140 46.4
AUR62036881 Chenopodium quinoa HOM05D005833 ORTHO05D008135 5.7e-19 99.8 117 48.7
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 5.3e-17 93.2 121 43.0
Glyma.14G222150 Glycine max HOM05D005833 ORTHO05D008135 2.1e-13 81.3 76 56.6
SMO230G0024 Selaginella moellendorffii HOM05D005833 ORTHO05D008135 7.9e-13 79.3 153 32.0
BcaC08g47127 Brassica carinata HOM05D005833 ORTHO05D008135 2.3e-12 77.8 177 33.3
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 6.7e-12 76.3 151 31.1
Mapoly0009s0070 Marchantia polymorpha HOM05D005833 ORTHO05D008135 3.7e-10 70.5 149 32.2
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 2.4e-09 67.8 66 53.0
BcaB05g24986 Brassica carinata HOM05D005833 ORTHO05D008135 2.0e-08 64.7 68 55.9
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 3.4e-08 63.9 153 28.1
Medtr1g026340 Medicago truncatula HOM05D005833 ORTHO05D008135 3.2e-06 57.4 72 47.2
Medtr1g026460 Medicago truncatula HOM05D005833 ORTHO05D008135 3.2e-06 57.4 72 47.2


User provided reference genes

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