Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_03387 Corchorus olitorius HOM05D000028 ORTHO05D010011 8.2e-85 317.0 158 100.0
COL.COLO4_20001 Corchorus olitorius HOM05D000028 ORTHO05D010011 1.7e-45 186.4 200 54.0
COL.COLO4_18130 Corchorus olitorius HOM05D000028 ORTHO05D010011 7.8e-27 124.4 136 53.7
Dinv09635 Davidia involucrata HOM05D008341 ORTHO05D009679 4.0e-23 112.1 114 43.0
Dinv32096 Davidia involucrata HOM05D008341 ORTHO05D009679 3.7e-21 105.5 110 41.8
Dinv06213 Davidia involucrata HOM05D001509 ORTHO05D001361 3.3e-17 92.4 149 34.9
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 7.3e-17 91.3 110 35.5
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 9.5e-17 90.9 112 34.8
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 1.2e-16 90.5 104 37.5
BolC6t38743H Brassica oleracea HOM05D018825 ORTHO05D017678 2.1e-16 89.7 136 35.3
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.1e-16 89.7 108 35.2
Dinv03545 Davidia involucrata HOM05D007975 ORTHO05D010011 2.1e-16 89.7 106 39.6
Dinv13148 Davidia involucrata HOM05D007975 ORTHO05D010011 3.6e-16 89.0 139 35.3
Dinv33501 Davidia involucrata HOM05D007975 ORTHO05D010011 3.6e-16 89.0 139 35.3
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 3.6e-16 89.0 108 36.1
Dinv30326 Davidia involucrata HOM05D007975 ORTHO05D010011 8.1e-16 87.8 139 36.0
Sp2g00480 Schrenkiella parvula HOM05D000017 ORTHO05D000013 1.4e-15 87.0 116 32.8
AL2G10700 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 1.5e-14 83.6 111 36.0
AL2G10720 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 2.0e-14 83.2 158 31.0
Dinv30694 Davidia involucrata HOM05D007975 ORTHO05D010011 2.0e-14 83.2 87 41.4
AL7G47630 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 2.6e-14 82.8 153 28.1
C09p17990 Brassica napus HOM05D000017 ORTHO05D000013 3.4e-14 82.4 110 35.5
AL1G57470 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 4.4e-14 82.0 115 31.3
C06p36220 Brassica napus HOM05D018825 ORTHO05D017678 5.8e-14 81.6 135 34.1
A09p14870 Brassica napus HOM05D000017 ORTHO05D000013 7.5e-14 81.3 112 34.8
AL2G10710 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 2.9e-13 79.3 111 36.0
Dinv44214 Davidia involucrata HOM05D007975 ORTHO05D010011 2.9e-13 79.3 95 40.0
Dinv05636 Davidia involucrata HOM05D007975 ORTHO05D010011 3.7e-13 79.0 95 40.0
BraA06t23535Z Brassica rapa HOM05D000017 ORTHO05D000013 4.9e-13 78.6 152 32.2
AT1G49920 Arabidopsis thaliana HOM05D000017 ORTHO05D000013 6.4e-13 78.2 115 29.6
AT1G64255 Arabidopsis thaliana HOM05D000017 ORTHO05D000013 8.3e-13 77.8 167 31.7
BraA09t37132Z Brassica rapa HOM05D000017 ORTHO05D000013 1.4e-12 77.0 112 33.9
Dinv11045 Davidia involucrata HOM05D007975 ORTHO05D010011 1.4e-12 77.0 92 40.2
Dinv03558 Davidia involucrata HOM05D007975 ORTHO05D010011 1.9e-12 76.6 134 34.3
AL7G47640 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 3.2e-12 75.9 115 28.7
Lj6A638G57 Lonicera japonica HOM05D007975 ORTHO05D010011 2.1e-11 73.2 110 30.0
Dinv36829 Davidia involucrata HOM05D007975 ORTHO05D010011 4.6e-11 72.0 134 32.8
Dinv33220 Davidia involucrata HOM05D007975 ORTHO05D010011 7.8e-11 71.2 129 34.1
A09p14860 Brassica napus HOM05D000017 ORTHO05D000013 1.0e-10 70.9 115 30.4
Thhalv10024064m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.0e-10 70.9 110 28.2
Haze_09988 Corylus avellana HOM05D000904 ORTHO05D006931 3.0e-10 69.3 138 26.1
AL7G47070 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 3.9e-10 68.9 120 26.7
Dinv01651 Davidia involucrata HOM05D007975 ORTHO05D010011 2.5e-09 66.2 134 29.9
BolC5t34106H Brassica oleracea HOM05D000033 ORTHO05D019988 4.3e-09 65.5 92 35.9
GSVIVG01037123001 Vitis vinifera HOM05D002273 ORTHO05D000818 4.3e-09 65.5 119 29.4
AT1G64260 Arabidopsis thaliana HOM05D000017 ORTHO05D000013 7.3e-09 64.7 113 28.3
Thhalv10007693m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.6e-08 63.5 107 29.0
Dinv23640 Davidia involucrata HOM05D008341 ORTHO05D009679 2.8e-08 62.8 63 46.0
Dinv11606 Davidia involucrata HOM05D008341 ORTHO05D009679 4.7e-08 62.0 63 44.4
Glyma.07G096500 Glycine max HOM05D000240 ORTHO05D002721 2.3e-07 59.7 117 25.6
Ca_14755_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 8.9e-07 57.8 109 31.2
Dinv23727 Davidia involucrata HOM05D007975 ORTHO05D010011 3.4e-06 55.8 110 34.5
Dinv38149 Davidia involucrata HOM05D008341 ORTHO05D009679 3.4e-06 55.8 63 42.9
Dinv01505 Davidia involucrata HOM05D007975 ORTHO05D010011 4.4e-06 55.5 110 33.6
Dinv13576 Davidia involucrata HOM05D007975 ORTHO05D010011 4.4e-06 55.5 110 33.6
Dinv28121 Davidia involucrata HOM05D007975 ORTHO05D010011 4.4e-06 55.5 110 33.6
Dinv35736 Davidia involucrata HOM05D007975 ORTHO05D010011 4.4e-06 55.5 110 33.6


User provided reference genes

Program Settings