Gene: AT1G49920
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G49920
- Transcript Identifier AT1G49920.1
- Gene Type Coding gene
- Location Chr1 : 18481798-18484233 : negative
Gene Family Information
- ID HOM05D000017
- #Genes/#Species 7105/86
- Phylogenetic origin
- ID ORTHO05D000013
- #Genes/#Species 5181/83
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G49920.1
- uniprot Q9C702
Descriptions
- Description MuDR family transposase
- Computational description MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005575 | ND | Gene Ontology | cellular_component |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |