Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_00575 Corchorus olitorius HOM05D000080 ORTHO05D157584 0.0e+00 1908.6 958 100.0
CiPaw.13G069400 Carya illinoinensis HOM05D000080 ORTHO05D000053 4.7e-10 71.2 399 24.3
Prupe.8G048100 Prunus persica HOM05D000080 ORTHO05D000053 3.1e-09 68.6 354 25.4
Zm00001eb166100 Zea mays HOM05D000080 ORTHO05D000053 5.2e-09 67.8 419 24.8
Gorai.004G234200 Gossypium raimondii HOM05D000080 ORTHO05D000053 1.2e-08 66.6 351 24.5
SEGI_36471 Sequoiadendron giganteum HOM05D000080 ORTHO05D001194 1.5e-08 66.2 341 24.3
Gohir.D03G143000 Gossypium hirsutum HOM05D000080 ORTHO05D000053 2.0e-08 65.9 396 23.5
Gorai.003G150200 Gossypium raimondii HOM05D000080 ORTHO05D000053 2.0e-08 65.9 396 23.5
SEGI_30224 Sequoiadendron giganteum HOM05D000080 ORTHO05D001194 2.0e-08 65.9 340 24.1
Gohir.A08G203200 Gossypium hirsutum HOM05D000080 ORTHO05D000053 2.6e-08 65.5 351 24.2
Sc21g0005280 Simmondsia chinensis HOM05D000080 ORTHO05D000053 2.6e-08 65.5 344 25.0
Gohir.A03G025500 Gossypium hirsutum HOM05D000080 ORTHO05D000053 3.4e-08 65.1 396 24.0
Hund18975 Selenicereus undatus HOM05D000080 ORTHO05D000053 3.4e-08 65.1 399 25.8
Eucgr.B04003 Eucalyptus grandis HOM05D000080 ORTHO05D000053 4.4e-08 64.7 472 22.5
CANSAT54G0696 Cannabis sativa HOM05D000080 ORTHO05D000053 5.8e-08 64.3 346 24.0
TWI79G1081 Tripterygium wilfordii HOM05D000080 ORTHO05D000053 5.8e-08 64.3 376 23.1
Gohir.D08G220300 Gossypium hirsutum HOM05D000080 ORTHO05D000053 7.6e-08 63.9 349 23.8
MSTRG.190 Avicennia marina HOM05D000080 ORTHO05D000053 9.9e-08 63.5 336 25.3
CARHR006690 Cardamine hirsuta HOM05D000080 ORTHO05D000053 9.9e-08 63.5 396 22.5
Duzib168G1507 Durio zibethinus HOM05D000080 ORTHO05D000053 1.3e-07 63.2 396 22.2
COL.COLO4_11153 Corchorus olitorius HOM05D000080 ORTHO05D000053 2.2e-07 62.4 353 24.4
THA.LOC104817377 Tarenaya hassleriana HOM05D000080 ORTHO05D009458 2.2e-07 62.4 370 21.6
THA.LOC104815814 Tarenaya hassleriana HOM05D000080 ORTHO05D000053 2.9e-07 62.0 394 23.1
arahy.Tifrunner.gnm1.ann1.QC7R0Y Arachis hypogaea HOM05D000080 ORTHO05D000053 3.7e-07 61.6 350 25.4
MELO3C020517.2 Cucumis melo HOM05D000080 ORTHO05D000053 4.9e-07 61.2 343 24.2
Thecc.09G357700 Theobroma cacao HOM05D000080 ORTHO05D000053 4.9e-07 61.2 395 23.3
Carub.0001s0629 Capsella rubella HOM05D000080 ORTHO05D000053 6.4e-07 60.8 392 21.2
Sabra07G0072800 Salix brachista HOM05D000080 ORTHO05D001194 6.4e-07 60.8 351 23.1
THA.LOC104800769 Tarenaya hassleriana HOM05D000080 ORTHO05D000053 8.4e-07 60.5 392 22.7
TWI77G0525 Tripterygium wilfordii HOM05D000080 ORTHO05D001194 8.4e-07 60.5 348 22.4
Glyma.12G121700 Glycine max HOM05D000080 ORTHO05D000053 1.1e-06 60.1 368 23.4
MD03G1056400 Malus domestica HOM05D000080 ORTHO05D000053 1.1e-06 60.1 351 24.2
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 1.1e-06 60.1 354 24.6
SpUn0354_0010 Schrenkiella parvula HOM05D000080 ORTHO05D000053 1.1e-06 60.1 413 24.2
SEGI_00699 Sequoiadendron giganteum HOM05D000080 ORTHO05D001194 1.1e-06 60.1 347 23.6
Sc23g0002010 Simmondsia chinensis HOM05D000080 ORTHO05D009458 1.1e-06 60.1 355 22.5
THA.LOC104810694 Tarenaya hassleriana HOM05D000080 ORTHO05D000053 1.1e-06 60.1 398 22.9
arahy.Tifrunner.gnm1.ann1.VWV3IQ Arachis hypogaea HOM05D000080 ORTHO05D000053 1.4e-06 59.7 358 25.1
arahy.Tifrunner.gnm1.ann1.WW5JWV Arachis hypogaea HOM05D000080 ORTHO05D000053 1.4e-06 59.7 358 25.1
SalBow7G2596 Salvia bowleyana HOM05D000080 ORTHO05D000053 1.4e-06 59.7 347 23.3
AL6G17310 Arabidopsis lyrata HOM05D000080 ORTHO05D000053 1.9e-06 59.3 412 23.5
EL10Ac7g15918 Beta vulgaris HOM05D000080 ORTHO05D000053 1.9e-06 59.3 351 25.6
Carub.0004s1137 Capsella rubella HOM05D000080 ORTHO05D000053 1.9e-06 59.3 402 23.6
Carub.0006s0605 Capsella rubella HOM05D000080 ORTHO05D000053 2.4e-06 58.9 412 23.5
Lalb_Chr04g0251961 Lupinus albus HOM05D000080 ORTHO05D000053 2.4e-06 58.9 133 30.1
SEGI_19680 Sequoiadendron giganteum HOM05D000080 ORTHO05D001194 2.4e-06 58.9 347 23.6
HPP92_003689 Vanilla planifolia HOM05D000080 ORTHO05D000053 2.4e-06 58.9 410 23.2
Ah.15g096050 Amaranthus hybridus HOM05D000080 ORTHO05D000053 3.2e-06 58.5 350 24.9
Aqoxy5G04297 Aquilegia oxysepala HOM05D000080 ORTHO05D009458 3.2e-06 58.5 370 21.6
CSS0017559 Camellia sinensis var. sinensis HOM05D000080 ORTHO05D000053 3.2e-06 58.5 362 24.0
Potri.007G088358 Populus trichocarpa HOM05D000080 ORTHO05D001194 3.2e-06 58.5 350 22.9
Sabra19G0122700 Salix brachista HOM05D000080 ORTHO05D000053 3.2e-06 58.5 133 29.3
EL10Ac2g04904 Beta vulgaris HOM05D000080 ORTHO05D000053 4.1e-06 58.2 348 23.6
Cfa026483 Carpinus fangiana HOM05D000080 ORTHO05D001194 4.1e-06 58.2 486 23.3
Thhalv10013732m.g Eutrema salsugineum HOM05D000080 ORTHO05D000053 4.1e-06 58.2 388 23.7
Thhalv10016445m.g Eutrema salsugineum HOM05D000080 ORTHO05D000053 4.1e-06 58.2 400 23.0
LjContig00141g0026824 Lotus japonicus HOM05D000080 ORTHO05D000053 4.1e-06 58.2 352 24.1
SGA_v2.0_scaffold60G20957 Striga asiatica HOM05D000080 ORTHO05D000053 4.1e-06 58.2 348 22.7
CARHR206010 Cardamine hirsuta HOM05D000080 ORTHO05D000053 5.4e-06 57.8 412 24.8
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 5.4e-06 57.8 349 24.6
Potri.001G248700 Populus trichocarpa HOM05D000080 ORTHO05D000053 5.4e-06 57.8 361 22.2
SEGI_36477 Sequoiadendron giganteum HOM05D000080 ORTHO05D001194 5.4e-06 57.8 357 22.7
TWI60G0627 Tripterygium wilfordii HOM05D000080 ORTHO05D000053 5.4e-06 57.8 351 24.2
Actinidia15625 Actinidia chinensis HOM05D000080 ORTHO05D000053 7.1e-06 57.4 381 23.4
FvH4_3g39750 Fragaria vesca HOM05D000080 ORTHO05D000053 7.1e-06 57.4 349 24.6
FAN11G2088 Fragaria x ananassa HOM05D000080 ORTHO05D000053 7.1e-06 57.4 349 24.6
Potri.007G088222 Populus trichocarpa HOM05D000080 ORTHO05D001194 7.1e-06 57.4 350 22.6
QL08p045841 Quercus lobata HOM05D000080 ORTHO05D009458 7.1e-06 57.4 349 22.1
SEGI_33444 Sequoiadendron giganteum HOM05D000080 ORTHO05D001194 7.1e-06 57.4 344 23.5
GSVIVG01012343001 Vitis vinifera HOM05D000080 ORTHO05D000053 7.1e-06 57.4 395 23.5
EL10Ac7g15920 Beta vulgaris HOM05D000080 ORTHO05D000053 9.2e-06 57.0 384 22.9
Cfa018242 Carpinus fangiana HOM05D000080 ORTHO05D000053 9.2e-06 57.0 371 23.2
CDE05G2478 Ceratophyllum demersum HOM05D000080 ORTHO05D001194 9.2e-06 57.0 357 23.0
Eucgr.I00385 Eucalyptus grandis HOM05D000080 ORTHO05D001194 9.2e-06 57.0 337 24.0
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 9.2e-06 57.0 349 24.6
Lalb_Chr15g0082701 Lupinus albus HOM05D000080 ORTHO05D000053 9.2e-06 57.0 366 22.4
Potri.005G079400 Populus trichocarpa HOM05D000080 ORTHO05D001194 9.2e-06 57.0 334 26.0
Rhsim13G0064300 Rhododendron simsii HOM05D000080 ORTHO05D000053 9.2e-06 57.0 123 28.5


User provided reference genes

Program Settings