Gene: Carub.0001s0629
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s0629
- Transcript Identifier Carub.0001s0629.1
- Gene Type Coding gene
- Location scaffold_1 : 2213822-2215912 : positive
Gene Family Information
- ID HOM05D000080
- #Genes/#Species 3730/98
- Phylogenetic origin
- ID ORTHO05D000053
- #Genes/#Species 2731/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s0629.v1.1
- pacid 39228563
- synonym Carubv10011512m.g
Descriptions
- Description PTHR11709:SF68 - LACCASE-13-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046274 | IEA | InterPro | lignin catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IEA | InterPro | copper ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0052716 | IEA | InterPro | hydroquinone:oxygen oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | IEA | InterPro | apoplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001117 | Multicopper oxidase, type 1 |
| IPR011707 | Multicopper oxidase, N-termianl |
| IPR034285 | Laccase, second cupredoxin domain |
| IPR008972 | Cupredoxin |
| IPR034289 | Laccase, third cupredoxin domain |
| IPR011706 | Multicopper oxidase, C-terminal |
| IPR017761 | Laccase |
| IPR045087 | Multicopper oxidase |
| IPR034288 | Laccase, first cupredoxin domain |
| Mapman id | Description |
|---|---|
| 50.1.10 | Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor |