Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0817 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.0e-227 793.1 407 100.0
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 6.6e-147 524.6 413 66.6
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 4.3e-146 521.9 385 70.1
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 1.8e-139 500.0 395 66.8
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.5e-138 496.9 406 66.0
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 2.5e-138 496.1 405 65.4
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 2.1e-137 493.0 409 64.1
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 3.7e-137 492.3 416 63.9
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.1e-136 490.7 405 65.7
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 2.4e-136 489.6 415 64.1
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 6.9e-136 488.0 407 64.1
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 9.0e-136 487.6 407 64.6
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.2e-134 483.0 400 64.0
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 3.5e-132 475.7 400 64.2
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 4.6e-132 475.3 372 66.1
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 6.0e-132 474.9 395 64.8
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 7.9e-132 474.6 405 63.2
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 7.9e-132 474.6 414 62.8
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 8.7e-131 471.1 389 64.5
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 3.3e-130 469.2 399 63.2
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 3.3e-130 469.2 418 61.5
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 9.6e-130 467.6 412 62.1
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 1.3e-129 467.2 409 62.6
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 1.3e-129 467.2 398 62.1
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 3.7e-129 465.7 408 63.2
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 4.8e-129 465.3 415 61.0
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 8.2e-129 464.5 413 59.8
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.1e-128 464.2 408 63.5
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.1e-128 464.2 392 62.8
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 1.8e-128 463.4 403 61.5
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 2.4e-128 463.0 396 61.6
Eucgr.J02835 Eucalyptus grandis HOM05D002270 ORTHO05D002866 2.4e-128 463.0 307 75.6
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 5.3e-128 461.8 409 60.6
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 9.0e-128 461.1 409 60.6
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 1.2e-127 460.7 396 62.9
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 2.6e-127 459.5 402 60.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 5.8e-127 458.4 402 60.7
Sed0006033 Sechium edule HOM05D002270 ORTHO05D002866 5.8e-127 458.4 336 68.5
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.0e-126 457.6 381 63.8
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.0e-126 457.6 404 61.4
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.3e-126 457.2 388 63.4
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.3e-126 457.2 403 60.8
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.7e-126 456.8 385 63.4
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.2e-126 456.4 410 60.7
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 2.9e-126 456.1 404 61.1
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 2.9e-126 456.1 404 61.1
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.4e-125 453.8 418 58.6
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 1.4e-125 453.8 408 61.3
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 3.2e-125 452.6 405 60.0
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 5.5e-125 451.8 417 59.5
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 9.3e-125 451.1 416 60.1
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.6e-124 448.7 403 60.0
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.6e-124 448.7 410 58.3
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.8e-123 446.8 410 58.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.3e-123 446.4 410 58.0
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 3.0e-123 446.0 406 58.4
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 5.1e-123 445.3 401 59.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 4.3e-122 442.2 408 59.1
COL.COLO4_12564 Corchorus olitorius HOM05D002270 ORTHO05D002866 7.4e-122 441.4 382 61.8
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 7.4e-122 441.4 403 60.0
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.6e-121 440.3 408 58.1
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 6.3e-121 438.3 414 58.7
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 8.2e-121 438.0 399 58.1
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.1e-120 437.6 269 80.7
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 3.1e-120 436.0 398 60.6
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 5.3e-120 435.3 412 59.2
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 6.9e-120 434.9 409 58.2
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.0e-119 433.3 392 58.9
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.7e-119 431.4 399 57.9
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 7.7e-119 431.4 424 58.0
TAR636G2258 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.0e-118 431.0 263 78.7
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.7e-118 430.3 416 57.0
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 5.0e-118 428.7 393 58.8
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.9e-117 426.8 389 59.6
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 7.2e-117 424.9 407 57.2
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 3.6e-116 422.5 400 57.2
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 3.6e-116 422.5 439 52.6
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 4.6e-116 422.2 415 58.3
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.3e-115 419.9 415 56.4
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 5.1e-115 418.7 406 58.6
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 3.7e-113 412.5 381 58.3
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 6.3e-113 411.8 410 55.4
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 4.1e-112 409.1 421 54.6
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 2.6e-111 406.4 417 53.2
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 3.4e-111 406.0 416 54.3
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.4e-111 406.0 413 54.7
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 1.7e-110 403.7 284 67.6
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.9e-110 402.9 409 53.3
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 5.0e-110 402.1 374 57.5
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 3.2e-109 399.4 410 52.7
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 3.2e-109 399.4 418 53.1
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 9.4e-109 397.9 393 55.0
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.6e-108 397.1 408 52.7
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 2.1e-108 396.7 410 52.4
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 2.1e-108 396.7 412 54.1
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 2.1e-108 396.7 447 52.8
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 4.7e-108 395.6 405 51.9
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 6.1e-108 395.2 408 52.5
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.4e-107 394.0 408 52.5
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.4e-107 394.0 408 52.5
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 1.4e-107 394.0 409 53.1
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 1.8e-107 393.7 299 64.9
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 2.6e-106 389.8 415 52.8
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 3.3e-106 389.4 417 51.8
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 8.2e-105 384.8 408 51.5
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 2.6e-103 379.8 421 49.4
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 1.1e-96 357.8 349 57.0
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.0e-88 328.6 320 57.5
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.4e-80 304.3 338 52.7
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 1.6e-79 300.8 284 55.3
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 5.9e-79 298.9 344 51.5
MCO14G006 Micromonas commoda HOM05D002270 ORTHO05D002866 8.6e-78 295.0 286 51.4
VMungo1080G1592 Vigna mungo HOM05D002270 ORTHO05D002866 2.6e-74 283.5 220 66.4
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 3.2e-72 276.6 340 46.2
BcaC07g41079 Brassica carinata HOM05D002270 ORTHO05D002866 7.8e-63 245.4 236 55.5
Aqoxy6G02932 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 4.7e-60 236.1 161 74.5
TPR.G51 Trifolium pratense HOM05D002270 ORTHO05D002866 1.1e-56 224.9 149 73.8
BcaB03g13736 Brassica carinata HOM05D002270 ORTHO05D002866 2.4e-48 197.2 167 58.1
SMO141G0258 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 9.0e-35 152.1 93 76.3
ECA067G0003 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.8e-28 130.6 205 43.9
TPR.G9785 Trifolium pratense HOM05D002270 ORTHO05D002866 2.9e-25 120.6 78 70.5
Medtr8g019250 Medicago truncatula HOM05D002270 ORTHO05D002866 2.4e-24 117.5 81 70.4
SMO141G0084 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 4.2e-24 116.7 81 64.2
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 3.5e-23 113.6 182 43.4
TPR.G582 Trifolium pratense HOM05D002270 ORTHO05D002866 6.0e-23 112.8 162 45.7
SEGI_22737 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.1e-20 104.4 76 61.8
QL05p008973 Quercus lobata HOM05D002270 ORTHO05D001155 9.3e-16 89.0 66 63.6
BolC8t51649H Brassica oleracea HOM05D002270 ORTHO05D002866 7.6e-10 69.3 78 46.2
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 1.4e-08 65.1 39 71.8
QL05p008929 Quercus lobata HOM05D002270 ORTHO05D338108 1.2e-07 62.0 144 33.3
SMO141G0121 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 2.7e-07 60.8 44 59.1


User provided reference genes

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