Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 2.0e-150 535.8 279 100.0
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 6.4e-117 424.5 273 80.2
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 1.9e-116 422.9 268 80.2
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 5.4e-116 421.4 265 81.9
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 7.8e-115 417.5 266 81.2
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.7e-114 416.4 266 80.1
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.9e-114 415.2 276 77.9
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 5.1e-114 414.8 277 76.2
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 8.7e-114 414.1 266 80.1
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 2.5e-113 412.5 269 78.8
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 3.3e-113 412.1 269 78.4
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 4.3e-113 411.8 279 77.1
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 7.3e-113 411.0 266 80.8
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.3e-112 410.2 266 79.3
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 1.6e-112 409.8 266 79.3
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 2.1e-112 409.5 277 77.6
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 2.8e-112 409.1 279 75.6
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 3.6e-112 408.7 276 76.8
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 4.8e-112 408.3 266 78.6
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 6.2e-112 407.9 266 80.5
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 1.4e-111 406.8 279 75.6
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 1.4e-111 406.8 266 77.4
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 2.4e-111 406.0 269 77.0
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 3.1e-111 405.6 266 78.2
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 4.0e-111 405.2 266 77.8
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 6.9e-111 404.4 266 78.2
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 9.0e-111 404.1 265 79.2
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 1.2e-110 403.7 266 77.1
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 1.5e-110 403.3 272 76.8
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 2.6e-110 402.5 266 78.9
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 7.6e-110 401.0 265 78.5
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 4.9e-109 398.3 266 77.1
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 4.9e-109 398.3 268 77.6
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 4.9e-109 398.3 265 77.7
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 3.2e-108 395.6 265 77.4
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 3.2e-108 395.6 266 76.7
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 3.2e-108 395.6 279 74.2
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 5.4e-108 394.8 271 74.9
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 4.6e-107 391.7 266 72.9
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 4.6e-107 391.7 274 75.5
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 6.0e-107 391.3 265 76.2
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 3.9e-106 388.7 265 75.8
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 3.9e-106 388.7 268 74.3
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 5.1e-106 388.3 265 75.8
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 2.5e-105 386.0 266 74.8
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 3.3e-105 385.6 265 75.1
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 3.3e-105 385.6 265 75.1
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 3.3e-105 385.6 265 74.7
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 7.4e-105 384.4 273 75.1
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 7.4e-105 384.4 265 75.1
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 9.6e-105 384.0 266 74.1
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.3e-104 383.6 265 74.7
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 1.6e-104 383.3 268 73.9
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 2.8e-104 382.5 265 74.3
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 3.6e-104 382.1 265 74.7
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 3.6e-104 382.1 273 73.6
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 4.8e-104 381.7 264 74.6
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 6.2e-104 381.3 266 73.3
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 8.1e-104 380.9 266 75.2
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 1.4e-103 380.2 265 74.3
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 1.4e-103 380.2 267 74.2
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 3.1e-103 379.0 266 74.4
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 5.3e-103 378.3 266 73.7
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 5.3e-103 378.3 266 74.4
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 6.9e-103 377.9 267 74.2
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 6.9e-103 377.9 267 74.2
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 9.0e-103 377.5 268 73.5
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.2e-102 377.1 268 73.5
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 2.0e-102 376.3 266 74.4
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 2.6e-102 375.9 267 73.8
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.4e-102 375.6 266 74.1
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 4.5e-102 375.2 266 74.1
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 7.6e-102 374.4 266 73.7
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 1.7e-101 373.2 265 73.6
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.2e-101 372.9 248 77.4
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 2.2e-101 372.9 277 73.3
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 1.1e-100 370.5 271 73.1
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 1.9e-100 369.8 271 72.7
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 2.4e-100 369.4 265 74.3
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 4.2e-100 368.6 252 77.0
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.2e-100 368.6 266 72.9
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 1.2e-99 367.1 247 76.5
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 4.6e-99 365.2 295 68.1
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 1.3e-98 363.6 263 71.1
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 5.1e-98 361.7 296 67.2
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 5.1e-98 361.7 295 68.5
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 8.7e-98 360.9 290 67.9
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 1.9e-97 359.8 294 67.3
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 3.3e-97 359.0 261 70.5
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 5.6e-97 358.2 241 73.0
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 1.6e-96 356.7 246 74.8
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 2.8e-96 355.9 301 65.1
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 3.1e-95 352.4 269 67.7
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 6.9e-95 351.3 243 74.9
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 2.0e-94 349.7 245 74.3
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 2.6e-94 349.4 278 68.7
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 4.5e-94 348.6 348 59.5
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 7.1e-92 341.3 267 68.9
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 1.3e-90 337.0 264 66.3
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 3.0e-90 335.9 298 63.1
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 5.7e-89 331.6 268 69.0
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 3.7e-88 328.9 265 64.9
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 4.8e-88 328.6 237 76.4
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.4e-84 317.0 209 78.5
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 1.9e-84 316.6 231 72.3
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 9.3e-84 314.3 213 74.2
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 4.6e-83 312.0 266 66.5
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 2.3e-82 309.7 263 60.5
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 1.9e-81 306.6 269 59.1
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 8.2e-80 301.2 266 57.5
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.1e-79 300.8 206 74.8
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 2.3e-74 283.1 176 83.0
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 6.5e-69 265.0 159 83.6
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 1.4e-68 263.8 160 83.8
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.4e-66 257.3 168 79.2
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 2.0e-49 200.3 134 76.1
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.7e-48 197.2 270 41.5
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 1.3e-45 187.6 134 73.9
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 5.4e-31 139.0 103 68.0
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 3.5e-30 136.3 241 39.0
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.0e-29 134.8 246 41.1
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.7e-27 125.9 78 83.3
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 8.9e-26 121.7 142 51.4
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.7e-24 117.5 78 74.4
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 2.0e-22 110.5 87 66.7
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 4.6e-22 109.4 79 70.9
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 4.6e-22 109.4 118 56.8
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 8.1e-19 98.6 88 59.1
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-16 91.3 61 77.0
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-15 87.8 62 74.2
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-15 87.8 62 77.4
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.4e-15 87.0 62 75.8
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 6.0e-14 82.4 99 44.4
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 6.0e-14 82.4 81 49.4
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 6.6e-13 79.0 58 75.9
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.3e-12 76.6 55 76.4
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 4.7e-11 72.8 57 64.9
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 2.0e-09 67.4 42 73.8
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 4.4e-09 66.2 124 39.5
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 1.3e-08 64.7 41 73.2
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 2.9e-08 63.5 35 82.9
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 2.9e-08 63.5 35 82.9
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 6.4e-08 62.4 39 79.5
SMO302G0029 Selaginella moellendorffii HOM05D000457 ORTHO05D375819 2.1e-06 57.4 52 59.6
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.7e-06 57.0 31 80.6


User provided reference genes

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