Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0397 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 6.6e-140 500.7 262 100.0
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 6.5e-63 245.0 400 40.2
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 8.8e-60 234.6 401 39.9
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 1.7e-58 230.3 398 38.7
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 5.4e-57 225.3 399 37.6
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 3.5e-56 222.6 399 37.6
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 1.7e-55 220.3 398 37.2
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 5.0e-55 218.8 397 37.0
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 1.5e-54 217.2 399 36.1
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 1.5e-54 217.2 396 36.9
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 1.9e-54 216.9 400 36.2
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 1.9e-54 216.9 400 36.5
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 1.9e-54 216.9 399 36.6
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 2.5e-54 216.5 400 36.5
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 1.2e-53 214.2 400 37.0
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 1.2e-53 214.2 400 37.0
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 1.2e-53 214.2 396 35.9
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 1.0e-52 211.1 396 36.1
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 5.2e-52 208.8 399 35.8
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 6.8e-52 208.4 396 35.4
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 6.8e-52 208.4 399 36.3
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 1.2e-51 207.6 399 34.6
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 1.2e-51 207.6 399 35.8
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 1.2e-51 207.6 400 36.2
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 1.5e-51 207.2 399 34.1
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 2.0e-51 206.8 393 36.4
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 2.6e-51 206.5 398 34.9
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 3.4e-51 206.1 401 36.2
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 4.4e-51 205.7 399 34.6
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 7.5e-51 204.9 399 35.1
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 7.5e-51 204.9 399 35.1
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 9.8e-51 204.5 400 36.5
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 1.3e-50 204.1 399 36.3
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.3e-50 204.1 378 36.2
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 1.3e-50 204.1 399 35.8
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 1.3e-50 204.1 400 35.0
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 1.7e-50 203.8 400 35.5
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 4.9e-50 202.2 401 35.9
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 3.2e-49 199.5 399 34.6
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 4.1e-49 199.1 398 34.9
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 4.1e-49 199.1 398 34.9
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 4.1e-49 199.1 401 35.2
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 4.1e-49 199.1 400 34.0
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 5.4e-49 198.7 397 34.5
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 5.4e-49 198.7 403 36.0
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 7.0e-49 198.4 395 35.2
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 9.2e-49 198.0 398 34.7
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 1.2e-48 197.6 398 35.4
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.2e-48 197.6 411 34.1
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 1.6e-48 197.2 397 34.8
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 1.6e-48 197.2 397 34.5
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 1.6e-48 197.2 397 34.5
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 5.9e-48 195.3 398 34.2
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 5.9e-48 195.3 401 34.4
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 5.9e-48 195.3 397 34.5
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 1.0e-47 194.5 136 70.6
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 2.3e-47 193.4 397 33.8
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 2.9e-47 193.0 399 33.6
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 5.0e-47 192.2 402 35.1
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 5.0e-47 192.2 402 35.1
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 1.5e-46 190.7 382 35.3
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 1.5e-46 190.7 398 33.4
Hma1.2p1_0840F.1_g226640 Hydrangea macrophylla HOM05D003893 ORTHO05D005167 1.5e-46 190.7 138 71.0
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 1.9e-46 190.3 396 35.4
BcaNung07386 Brassica carinata HOM05D003893 ORTHO05D005167 9.5e-46 188.0 141 68.1
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 9.5e-46 188.0 399 34.8
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 2.8e-45 186.4 400 33.5
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.6e-45 186.0 400 33.0
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 6.1e-45 185.3 400 33.2
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 8.0e-45 184.9 179 56.4
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 1.0e-44 184.5 393 32.8
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 1.0e-44 184.5 389 32.6
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.4e-44 184.1 138 66.7
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 2.3e-44 183.3 136 67.6
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 4.0e-44 182.6 409 33.0
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 6.8e-44 181.8 399 35.3
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 6.8e-44 181.8 400 33.0
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.2e-43 181.0 396 33.3
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 2.6e-43 179.9 399 34.8
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 7.5e-43 178.3 469 31.1
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.7e-42 177.2 400 32.8
SalBow1G1311 Salvia bowleyana HOM05D003893 ORTHO05D005167 2.2e-42 176.8 138 65.2
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 2.2e-42 176.8 138 65.2
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 2.9e-42 176.4 441 31.1
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 6.4e-42 175.3 400 32.0
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 1.6e-37 160.6 399 32.8
Haze_08368 Corylus avellana HOM05D003893 ORTHO05D005167 5.8e-35 152.1 167 51.5
arahy.Tifrunner.gnm1.ann1.LQQ75E Arachis hypogaea HOM05D003893 ORTHO05D005167 4.0e-28 129.4 93 65.6
arahy.Tifrunner.gnm1.ann1.MLK8WM Arachis hypogaea HOM05D003893 ORTHO05D005167 4.0e-28 129.4 93 66.7
SEGI_19363 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 5.2e-28 129.0 126 57.1
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 5.2e-28 129.0 434 27.2
VMungo0251G2570 Vigna mungo HOM05D003893 ORTHO05D005167 8.9e-28 128.3 83 74.7
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 7.6e-27 125.2 287 33.4
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 9.9e-27 124.8 365 29.0
arahy.Tifrunner.gnm1.ann1.NA56E9 Arachis hypogaea HOM05D003893 ORTHO05D005167 3.7e-26 122.9 88 67.0
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 1.0e-23 114.8 136 44.1
arahy.Tifrunner.gnm1.ann1.9S00H1 Arachis hypogaea HOM05D003893 ORTHO05D005167 1.2e-21 107.8 77 64.9
CBR_g21119 Chara braunii HOM05D000019 ORTHO05D005167 5.2e-20 102.4 141 38.3
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 2.0e-19 100.5 327 29.1
Haze_08367 Corylus avellana HOM05D003893 ORTHO05D005167 2.4e-17 93.6 147 40.1
arahy.Tifrunner.gnm1.ann1.T8TVPL Arachis hypogaea HOM05D000826 ORTHO05D006448 7.8e-16 88.6 71 62.0
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 1.7e-15 87.4 125 41.6
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.1e-14 84.7 130 36.2
arahy.Tifrunner.gnm1.ann1.QNR9EZ Arachis hypogaea HOM05D000826 ORTHO05D006448 1.5e-14 84.3 71 60.6
arahy.Tifrunner.gnm1.ann1.UB4SVV Arachis hypogaea HOM05D003893 ORTHO05D005167 1.6e-13 80.9 64 62.5
arahy.Tifrunner.gnm1.ann1.BV66IC Arachis hypogaea HOM05D000826 ORTHO05D006448 2.8e-13 80.1 53 71.7
arahy.Tifrunner.gnm1.ann1.T26UD0 Arachis hypogaea HOM05D000826 ORTHO05D006448 2.8e-13 80.1 52 73.1
arahy.Tifrunner.gnm1.ann1.V6RYFZ Arachis hypogaea HOM05D000826 ORTHO05D006448 2.8e-13 80.1 53 71.7
arahy.Tifrunner.gnm1.ann1.L0U5DT Arachis hypogaea HOM05D003893 ORTHO05D005167 3.1e-12 76.6 88 50.0
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 4.0e-12 76.3 130 35.4
arahy.Tifrunner.gnm1.ann1.AZ80GT Arachis hypogaea HOM05D000826 ORTHO05D006448 5.3e-12 75.9 49 71.4
arahy.Tifrunner.gnm1.ann1.FKEW18 Arachis hypogaea HOM05D003893 ORTHO05D005167 1.2e-11 74.7 47 74.5
SEGI_09425 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 5.4e-09 65.9 124 33.1
Psat7g156960 Pisum sativum HOM05D003893 ORTHO05D005167 3.0e-07 60.1 82 35.4
arahy.Tifrunner.gnm1.ann1.3X15P1 Arachis hypogaea HOM05D000826 ORTHO05D006448 3.3e-06 56.6 36 69.4


User provided reference genes

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