Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 1.3e-254 882.5 436 100.0
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 1.8e-235 818.9 436 92.7
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 3.7e-111 406.0 432 50.9
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 3.8e-100 369.4 430 47.7
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 1.8e-97 360.5 423 46.8
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 2.3e-97 360.1 424 46.7
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 8.3e-95 351.7 433 44.8
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 8.3e-95 351.7 436 45.9
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 9.1e-94 348.2 427 47.8
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 4.5e-93 345.9 425 47.3
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 4.5e-93 345.9 462 44.2
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 1.7e-92 344.0 424 45.8
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 2.9e-92 343.2 425 45.9
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 2.9e-92 343.2 431 44.1
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 6.5e-92 342.0 425 45.6
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 8.5e-92 341.7 429 45.9
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 1.5e-91 340.9 491 41.1
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 2.5e-91 340.1 442 46.2
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 4.2e-91 339.3 469 42.2
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 5.5e-91 339.0 442 44.6
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 5.5e-91 339.0 420 44.8
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 1.2e-90 337.8 448 42.2
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 1.2e-90 337.8 423 44.4
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 1.2e-90 337.8 392 46.9
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 2.1e-90 337.0 430 44.0
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 3.6e-90 336.3 433 44.8
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 4.7e-90 335.9 448 42.0
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 6.1e-90 335.5 427 45.7
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 1.0e-89 334.7 425 46.8
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 1.8e-89 334.0 443 44.0
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.3e-89 333.6 447 44.5
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.3e-89 333.6 425 45.2
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.3e-89 333.6 427 45.2
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.0e-89 332.8 427 45.4
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 5.2e-89 332.4 424 45.5
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 5.2e-89 332.4 388 48.7
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 6.8e-89 332.0 425 44.7
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 1.2e-88 331.3 371 49.1
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.0e-88 330.5 428 45.3
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 3.4e-88 329.7 425 44.2
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 3.4e-88 329.7 429 44.5
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 4.4e-88 329.3 427 45.4
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 5.7e-88 328.9 457 42.2
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 7.5e-88 328.6 424 45.5
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 7.5e-88 328.6 429 44.5
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 1.7e-87 327.4 426 45.8
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.7e-87 327.4 443 44.2
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 4.9e-87 325.9 427 43.8
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 1.1e-86 324.7 443 44.0
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 1.4e-86 324.3 428 43.9
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 1.8e-86 323.9 359 50.4
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 3.1e-86 323.2 413 45.0
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 4.1e-86 322.8 427 44.5
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.4e-86 322.4 451 43.0
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 5.4e-86 322.4 423 43.5
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 7.0e-86 322.0 293 53.6
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 9.1e-86 321.6 427 43.3
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 1.2e-85 321.2 422 43.6
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 2.0e-85 320.5 446 43.7
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 2.7e-85 320.1 424 42.7
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 4.5e-85 319.3 287 55.7
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.5e-85 319.3 285 54.4
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 5.9e-85 318.9 284 56.0
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 7.7e-85 318.5 434 42.9
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 1.7e-84 317.4 427 43.1
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 2.3e-84 317.0 287 55.4
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 2.3e-84 317.0 440 42.3
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 5.0e-84 315.8 433 43.0
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 8.6e-84 315.1 446 44.8
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.5e-83 314.3 426 42.5
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 7.2e-83 312.0 431 41.8
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 1.2e-82 311.2 432 43.3
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 1.6e-82 310.8 423 42.8
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 2.1e-82 310.5 445 43.8
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 2.8e-82 310.1 438 40.0
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 2.8e-82 310.1 274 56.6
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 6.1e-82 308.9 436 42.7
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 2.3e-81 307.0 270 55.2
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 2.3e-81 307.0 437 43.0
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 3.0e-81 306.6 428 42.3
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 5.2e-81 305.8 426 41.8
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 6.8e-81 305.4 438 42.5
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.2e-80 304.7 439 43.3
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.2e-80 304.7 439 43.3
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 2.6e-80 303.5 436 42.4
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 3.4e-80 303.1 391 44.5
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 5.7e-80 302.4 436 43.8
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 7.5e-80 302.0 315 49.2
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 9.8e-80 301.6 425 43.1
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 9.8e-80 301.6 313 51.8
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 2.2e-79 300.4 435 43.0
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 2.2e-79 300.4 435 43.0
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 3.7e-79 299.7 449 41.0
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 1.1e-78 298.1 525 37.3
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 4.1e-78 296.2 435 41.8
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 5.4e-78 295.8 286 50.3
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 1.2e-77 294.7 429 42.4
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 7.8e-77 292.0 300 51.3
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 8.6e-76 288.5 431 39.9
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 2.8e-74 283.5 286 53.1
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 6.1e-74 282.3 286 52.4
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 1.0e-73 281.6 285 51.6
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 8.9e-73 278.5 420 39.5
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 1.2e-72 278.1 285 51.2
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 1.2e-72 278.1 285 51.2
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 2.6e-72 276.9 427 38.9
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 1.7e-71 274.2 426 39.2
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 3.5e-69 266.5 449 41.0
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 1.0e-68 265.0 298 47.7
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 5.6e-67 259.2 301 44.5
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 2.8e-66 256.9 384 39.6
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 6.2e-66 255.8 290 45.5
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 3.7e-63 246.5 447 36.9
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 4.7e-58 229.6 255 46.3
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 8.1e-58 228.8 283 43.5
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 1.9e-54 217.6 211 53.6
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.1e-53 214.2 316 41.8
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 3.6e-50 203.4 298 38.6
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.2e-48 198.4 310 40.6
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 4.4e-48 196.4 368 37.2
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 4.4e-48 196.4 300 38.3
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 3.0e-44 183.7 187 50.3
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 1.3e-42 178.3 283 37.8
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 6.2e-42 176.0 166 51.2
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 9.9e-40 168.7 369 35.5
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 1.4e-38 164.9 123 62.6
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 1.9e-38 164.5 278 37.4
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 3.5e-37 160.2 242 36.0
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 3.5e-37 160.2 136 54.4
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 3.0e-36 157.1 296 36.5
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 8.7e-36 155.6 158 53.2
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 1.9e-35 154.5 244 34.0
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.3e-35 153.3 126 57.1
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.4e-30 137.5 89 69.7
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 2.1e-29 134.4 183 39.3
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 3.5e-29 133.7 183 38.8
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.5e-27 127.5 99 62.6
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.6e-24 117.5 80 67.5
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 6.5e-23 112.8 109 52.3
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 1.1e-22 112.1 80 65.0
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 2.7e-21 107.5 137 43.1
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 2.5e-19 100.9 60 73.3
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 9.6e-19 99.0 266 27.8
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.1e-17 93.6 66 62.1
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 6.9e-17 92.8 68 63.2
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 9.0e-17 92.4 239 34.3
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 2.0e-16 91.3 135 40.7
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.0e-15 89.0 59 62.7
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 4.2e-14 83.6 55 65.5
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 2.7e-13 80.9 175 30.3
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.3e-10 72.0 166 34.9
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.2e-10 71.2 55 60.0
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.2e-10 71.2 55 60.0
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.7e-10 70.5 53 54.7
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.5e-08 65.1 53 49.1
GSVIVG01037069001 Vitis vinifera HOM05D004413 ORTHO05D005199 7.7e-08 62.8 54 53.7
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 1.3e-07 62.0 97 39.2
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 2.2e-07 61.2 231 26.0


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