Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 6.2e-263 910.2 452 100.0
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 8.8e-132 474.6 461 53.1
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 8.2e-122 441.4 474 51.1
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 1.7e-119 433.7 454 53.1
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 2.5e-118 429.9 456 51.1
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 5.5e-118 428.7 457 49.7
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 2.7e-117 426.4 460 50.4
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 4.7e-117 425.6 465 49.0
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 3.9e-116 422.5 455 51.4
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 6.7e-116 421.8 457 49.2
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 2.0e-115 420.2 453 51.2
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 4.4e-115 419.1 457 48.8
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 6.3e-114 415.2 457 49.5
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 8.2e-114 414.8 457 49.9
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 4.1e-113 412.5 457 48.4
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 5.0e-111 405.6 459 47.9
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 5.0e-111 405.6 457 51.6
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 6.5e-111 405.2 459 47.7
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 1.1e-110 404.4 475 46.7
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 2.5e-110 403.3 463 49.7
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 1.6e-109 400.6 458 48.0
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 2.1e-109 400.2 459 48.8
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 4.7e-109 399.1 466 46.6
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 3.0e-108 396.4 462 47.4
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 5.7e-107 392.1 463 46.0
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 7.5e-107 391.7 479 47.0
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 9.7e-107 391.3 472 44.9
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 9.7e-107 391.3 467 46.5
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 2.2e-106 390.2 462 47.0
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 2.2e-106 390.2 459 45.1
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 2.2e-106 390.2 470 46.4
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 2.8e-106 389.8 461 49.0
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 8.2e-106 388.3 473 46.1
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 4.1e-105 386.0 468 45.9
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 9.1e-105 384.8 466 44.8
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 1.0e-103 381.3 474 45.4
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 1.6e-101 374.0 456 46.1
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 1.6e-101 374.0 468 46.8
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 2.1e-101 373.6 471 45.4
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 3.0e-100 369.8 479 43.2
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 3.0e-100 369.8 464 43.8
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 4.0e-100 369.4 472 44.7
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 5.2e-100 369.0 471 44.8
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 6.8e-100 368.6 488 44.3
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 1.2e-99 367.9 474 43.2
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 1.2e-99 367.9 460 45.4
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.6e-99 366.7 458 43.7
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 1.3e-98 364.4 460 43.5
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 2.4e-97 360.1 465 44.7
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 4.5e-96 355.9 430 46.5
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 3.8e-95 352.8 426 50.7
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 1.5e-94 350.9 556 39.6
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 3.5e-88 329.7 450 42.0
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 2.5e-86 323.6 345 47.8
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 5.6e-86 322.4 461 42.3
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.6e-85 320.9 381 46.5
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 2.1e-85 320.5 454 42.1
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 4.0e-84 316.2 495 37.8
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 6.8e-84 315.5 453 45.9
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 1.5e-83 314.3 478 41.8
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 9.8e-83 311.6 429 42.2
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 2.2e-82 310.5 412 44.2
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 3.7e-82 309.7 456 39.0
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 1.1e-81 308.1 317 53.9
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 1.9e-81 307.4 424 40.3
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 4.1e-81 306.2 292 56.2
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 1.6e-80 304.3 453 40.2
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 3.0e-79 300.1 520 39.6
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 1.2e-75 288.1 489 39.9
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 5.1e-71 272.7 499 33.3
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 3.3e-70 270.0 473 36.6
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 6.0e-64 249.2 333 43.5
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 3.0e-63 246.9 537 33.9
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 5.8e-59 232.6 354 35.3
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 2.1e-53 214.2 349 41.8
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.1e-48 197.6 211 54.5
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 1.6e-45 188.0 348 35.9
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 4.5e-43 179.9 301 41.5
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.2e-41 173.7 333 37.2
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 4.3e-38 163.3 346 33.8
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 4.5e-35 153.3 104 65.4
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 5.5e-33 146.4 317 36.6
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 8.2e-29 132.5 370 31.6
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 4.8e-21 106.7 244 36.1
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 3.9e-15 87.0 105 47.6
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 6.9e-12 76.3 190 35.3
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 2.0e-11 74.7 36 83.3
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 7.7e-11 72.8 49 61.2
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 1.3e-10 72.0 63 46.0
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 1.7e-10 71.6 72 47.2
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 1.7e-10 71.6 51 58.8
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 8.5e-10 69.3 69 52.2
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 1.1e-09 68.9 98 42.9
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 1.1e-09 68.9 51 58.8
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 1.1e-09 68.9 47 61.7
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.1e-09 68.9 47 61.7
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.1e-09 68.9 47 61.7
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.1e-09 68.9 47 61.7
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.1e-09 68.9 47 61.7
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 1.1e-09 68.9 47 61.7
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 1.4e-09 68.6 47 63.8
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.9e-09 68.2 106 40.6
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 1.9e-09 68.2 46 63.0
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 2.5e-09 67.8 50 56.0
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 2.5e-09 67.8 58 51.7
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 2.5e-09 67.8 50 60.0
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 3.2e-09 67.4 42 61.9
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 3.2e-09 67.4 48 56.2
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 3.2e-09 67.4 68 47.1
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 3.2e-09 67.4 53 52.8
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 4.2e-09 67.0 50 60.0
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 4.2e-09 67.0 75 42.7
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 4.2e-09 67.0 59 54.2
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 4.2e-09 67.0 43 60.5
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 4.2e-09 67.0 53 52.8
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 4.2e-09 67.0 51 56.9
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 4.2e-09 67.0 48 54.2
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 5.5e-09 66.6 63 50.8
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 5.5e-09 66.6 75 46.7
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 5.5e-09 66.6 51 54.9
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 7.2e-09 66.2 49 55.1
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 7.2e-09 66.2 49 55.1
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 7.2e-09 66.2 48 54.2
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 7.2e-09 66.2 43 65.1
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 7.2e-09 66.2 42 61.9
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 9.4e-09 65.9 50 54.0
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 9.4e-09 65.9 55 52.7
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 9.4e-09 65.9 47 61.7
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 9.4e-09 65.9 55 52.7
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 1.2e-08 65.5 55 56.4
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 1.2e-08 65.5 50 54.0
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 1.2e-08 65.5 70 50.0
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 1.2e-08 65.5 70 50.0
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 1.6e-08 65.1 50 56.0
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.6e-08 65.1 70 44.3
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 1.6e-08 65.1 66 47.0
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 1.6e-08 65.1 48 52.1
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 1.6e-08 65.1 65 44.6
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 1.6e-08 65.1 55 52.7
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 2.1e-08 64.7 44 61.4
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 2.1e-08 64.7 49 55.1
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 2.1e-08 64.7 51 54.9
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 2.1e-08 64.7 46 58.7
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 2.1e-08 64.7 47 55.3
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 2.1e-08 64.7 45 57.8
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 2.7e-08 64.3 49 53.1
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 2.7e-08 64.3 41 63.4
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 3.6e-08 63.9 47 59.6
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 3.6e-08 63.9 47 55.3
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 3.6e-08 63.9 40 65.0
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 3.6e-08 63.9 47 57.4
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 4.7e-08 63.5 59 50.8
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 4.7e-08 63.5 49 55.1
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 4.7e-08 63.5 42 61.9
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 4.7e-08 63.5 41 63.4
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 4.7e-08 63.5 45 57.8
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 4.7e-08 63.5 51 54.9
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 6.1e-08 63.2 45 57.8
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 6.1e-08 63.2 39 64.1
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 6.1e-08 63.2 40 60.0
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 7.9e-08 62.8 47 57.4
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 7.9e-08 62.8 61 47.5
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 7.9e-08 62.8 80 41.2
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 7.9e-08 62.8 63 44.4
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 7.9e-08 62.8 49 53.1
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 7.9e-08 62.8 47 53.2
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 1.0e-07 62.4 52 50.0
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 1.8e-07 61.6 47 53.2
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 2.3e-07 61.2 51 49.0
SMO201G0222 Selaginella moellendorffii HOM05D000032 ORTHO05D009383 2.3e-07 61.2 106 34.0
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 3.0e-07 60.8 39 61.5
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 3.0e-07 60.8 53 54.7
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 3.0e-07 60.8 70 41.4
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 5.1e-07 60.1 49 49.0
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 5.1e-07 60.1 51 49.0
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 5.1e-07 60.1 39 64.1
CSS0012229 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 6.7e-07 59.7 69 49.3
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 6.7e-07 59.7 51 51.0
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 6.7e-07 59.7 36 63.9
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 8.8e-07 59.3 158 27.8
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 1.1e-06 58.9 82 36.6
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 1.5e-06 58.5 39 56.4
SEGI_30518 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 4.4e-06 57.0 94 37.2


User provided reference genes

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