Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1179 Ceratophyllum demersum HOM05D002325 ORTHO05D000336 4.6e-100 367.9 182 100.0
CDE05G0476 Ceratophyllum demersum HOM05D002325 ORTHO05D000336 4.7e-52 208.4 127 84.3
MBI03_g05986_MAGBIO Magnolia biondii HOM05D002325 ORTHO05D000336 3.9e-22 109.0 165 38.8
Os04g0448700 Oryza sativa ssp. japonica HOM05D002325 ORTHO05D000336 1.1e-19 100.9 158 39.2
TAR628G1557 Trochodendron aralioides HOM05D002325 ORTHO05D000336 1.8e-19 100.1 178 37.1
MBI06_g44271_MAGBIO Magnolia biondii HOM05D002325 ORTHO05D000336 2.4e-19 99.8 178 39.9
CSS0041796 Camellia sinensis var. sinensis HOM05D002325 ORTHO05D000336 4.0e-19 99.0 177 39.0
GSVIVG01022415001 Vitis vinifera HOM05D002325 ORTHO05D000336 4.5e-18 95.5 157 38.9
QL01p016384 Quercus lobata HOM05D002325 ORTHO05D000336 7.6e-18 94.7 179 35.2
Aqoxy4G01475 Aquilegia oxysepala HOM05D002325 ORTHO05D000336 9.9e-18 94.4 132 42.4
PSO170G3082 Papaver somniferum HOM05D002325 ORTHO05D000336 1.3e-17 94.0 124 41.9
Aqoxy6G00165 Aquilegia oxysepala HOM05D002325 ORTHO05D000336 8.4e-17 91.3 154 38.3
COL.COLO4_14381 Corchorus olitorius HOM05D002325 ORTHO05D000336 8.4e-17 91.3 174 33.9
Dinv05030 Davidia involucrata HOM05D002325 ORTHO05D000336 8.4e-17 91.3 178 35.4
PSO782G1953 Papaver somniferum HOM05D002325 ORTHO05D000336 8.4e-17 91.3 119 43.7
Lj9C645T7 Lonicera japonica HOM05D002325 ORTHO05D000336 3.2e-16 89.4 115 44.3
Gohir.D12G246650 Gossypium hirsutum HOM05D002325 ORTHO05D000336 4.2e-16 89.0 160 36.9
Lsat_1_v5_gn_1_100920 Lactuca sativa HOM05D002325 ORTHO05D000336 5.4e-16 88.6 167 34.1
QL01p020530 Quercus lobata HOM05D002325 ORTHO05D000336 1.2e-15 87.4 172 33.7
Rhsim06G0197800 Rhododendron simsii HOM05D002325 ORTHO05D000336 1.2e-15 87.4 172 33.7
Gohir.A12G246000 Gossypium hirsutum HOM05D002325 ORTHO05D000336 1.6e-15 87.0 176 33.5
Gorai.008G264500 Gossypium raimondii HOM05D002325 ORTHO05D000336 4.6e-15 85.5 160 33.8
DCAR_031818 Daucus carota HOM05D002325 ORTHO05D000336 3.0e-14 82.8 94 42.6
vmacro22869 Vaccinium macrocarpon HOM05D002325 ORTHO05D000336 5.1e-14 82.0 177 33.3
Nitab4.5_0001775g0010 Nicotiana tabacum HOM05D002325 ORTHO05D000336 1.1e-13 80.9 183 33.9
ECA240G3278 Erigeron canadensis HOM05D002325 ORTHO05D000336 1.5e-13 80.5 168 33.9
CAN.G410.27 Capsicum annuum HOM05D002325 ORTHO05D000336 2.5e-13 79.7 183 33.3
Nn8g38650 Nelumbo nucifera HOM05D002325 ORTHO05D000336 2.1e-12 76.6 79 53.2
Peaxi162Scf83466g00002 Petunia axillaris HOM05D002325 ORTHO05D000336 4.8e-12 75.5 154 31.2
ECA248G2216 Erigeron canadensis HOM05D002325 ORTHO05D000336 6.2e-12 75.1 172 32.6
HanXRQChr11g0346731 Helianthus annuus HOM05D002325 ORTHO05D000336 6.2e-12 75.1 163 33.7
Hma1.2p1_0579F.1_g182680 Hydrangea macrophylla HOM05D002325 ORTHO05D000336 8.1e-12 74.7 94 42.6
Nitab4.5_0000316g0290 Nicotiana tabacum HOM05D002325 ORTHO05D000336 8.1e-12 74.7 126 39.7
HPP92_020648 Vanilla planifolia HOM05D002325 ORTHO05D000336 8.1e-12 74.7 175 33.7
HanXRQChr11g0341141 Helianthus annuus HOM05D002325 ORTHO05D000336 1.1e-11 74.3 166 33.1
PGSC0003DMG400006825 Solanum tuberosum HOM05D002325 ORTHO05D000336 2.4e-11 73.2 180 30.6
Cc02_g30110 Coffea canephora HOM05D002325 ORTHO05D000336 3.1e-11 72.8 162 31.5
Sopen01g035070 Solanum pennellii HOM05D002325 ORTHO05D000336 3.1e-11 72.8 180 32.2
Lsat_1_v5_gn_1_100881 Lactuca sativa HOM05D002325 ORTHO05D000336 6.9e-11 71.6 68 50.0
Lsat_1_v5_gn_4_30280 Lactuca sativa HOM05D002325 ORTHO05D000336 1.5e-10 70.5 167 30.5
Lsat_1_v5_gn_3_25721 Lactuca sativa HOM05D002325 ORTHO05D000336 2.6e-10 69.7 77 44.2
Solyc01g088240.4 Solanum lycopersicum HOM05D002325 ORTHO05D000336 4.5e-10 68.9 180 31.1
Aa31LG9G8940 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.2e-09 66.6 81 40.7
Aa31LG9G9120 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.1e-08 64.3 110 33.6
SEGI_24003 Sequoiadendron giganteum HOM05D002325 ORTHO05D000336 3.2e-08 62.8 71 39.4
Mapoly0058s0120 Marchantia polymorpha HOM05D000710 ORTHO05D000336 4.2e-08 62.4 67 43.3
Aa31LG9G8920 Aethionema arabicum HOM05D000710 ORTHO05D000336 9.3e-08 61.2 109 33.9
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 9.3e-08 61.2 72 40.3
BcaB01g01966 Brassica carinata HOM05D000710 ORTHO05D000336 1.2e-07 60.8 113 34.5
Mapoly0058s0118 Marchantia polymorpha HOM05D000710 ORTHO05D000336 1.2e-07 60.8 97 40.2
Aa31sc2735G10 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.6e-07 60.5 60 41.7
AL8G22800 Arabidopsis lyrata HOM05D000710 ORTHO05D000336 1.6e-07 60.5 77 44.2
Aa31LG9G9090 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.7e-07 59.7 76 38.2
A09p02910 Brassica napus HOM05D000710 ORTHO05D000336 3.5e-07 59.3 105 36.2
CARHR252070 Cardamine hirsuta HOM05D000710 ORTHO05D000336 3.5e-07 59.3 101 37.6
Thhalv10028911m.g Eutrema salsugineum HOM05D000710 ORTHO05D000336 3.5e-07 59.3 77 39.0
Thhalv10029272m.g Eutrema salsugineum HOM05D000710 ORTHO05D000336 3.5e-07 59.3 114 32.5
BcaC07g42483 Brassica carinata HOM05D000710 ORTHO05D000336 4.6e-07 58.9 125 32.0
Aa31LG9G8900 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.0e-06 57.8 60 40.0
Carub.0002s1203 Capsella rubella HOM05D000710 ORTHO05D000336 1.0e-06 57.8 105 34.3
Aa31LG9G9080 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.3e-06 57.4 91 34.1
A09p02530 Brassica napus HOM05D000710 ORTHO05D000336 1.3e-06 57.4 98 37.8
CARHR252050 Cardamine hirsuta HOM05D000710 ORTHO05D000336 1.3e-06 57.4 82 36.6
Aa31LG9G8950 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.8e-06 57.0 58 43.1
BcaC04g23947 Brassica carinata HOM05D000710 ORTHO05D000336 1.8e-06 57.0 71 39.4
BolC9t53229H Brassica oleracea HOM05D000710 ORTHO05D000336 1.8e-06 57.0 71 39.4
BraA09t41971Z Brassica rapa HOM05D000710 ORTHO05D000336 1.8e-06 57.0 96 37.5
Gohir.A03G217000 Gossypium hirsutum HOM05D000710 ORTHO05D000336 1.8e-06 57.0 110 37.3
Gohir.D02G238600 Gossypium hirsutum HOM05D000710 ORTHO05D000336 1.8e-06 57.0 110 37.3
Gorai.005G267100 Gossypium raimondii HOM05D000710 ORTHO05D000336 1.8e-06 57.0 110 37.3
Aa31LG9G8930 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.3e-06 56.6 70 35.7
BcaB01g02545 Brassica carinata HOM05D000710 ORTHO05D000336 2.3e-06 56.6 118 31.4
BcaC04g23989 Brassica carinata HOM05D000710 ORTHO05D000336 3.0e-06 56.2 93 39.8
Psat4g202320 Pisum sativum HOM05D000710 ORTHO05D000336 3.0e-06 56.2 82 41.5
Aa31LG9G8910 Aethionema arabicum HOM05D000710 ORTHO05D000336 3.9e-06 55.8 61 36.1
BcaC03g13903 Brassica carinata HOM05D000710 ORTHO05D000336 3.9e-06 55.8 76 35.5
CARHR252100 Cardamine hirsuta HOM05D000710 ORTHO05D000336 3.9e-06 55.8 61 41.0
Medtr3g065610 Medicago truncatula HOM05D000710 ORTHO05D000336 3.9e-06 55.8 84 39.3
AT4G05460 Arabidopsis thaliana HOM05D000710 ORTHO05D000336 5.1e-06 55.5 131 29.8
BcaB01g01970 Brassica carinata HOM05D000710 ORTHO05D000336 5.1e-06 55.5 83 33.7
A09p66340 Brassica napus HOM05D000710 ORTHO05D000336 5.1e-06 55.5 150 32.7
BolC3t15975H Brassica oleracea HOM05D000710 ORTHO05D000336 5.1e-06 55.5 76 36.8
Carub.0002s1205 Capsella rubella HOM05D000710 ORTHO05D000336 5.1e-06 55.5 58 39.7
Lalb_Chr07g0185011 Lupinus albus HOM05D000710 ORTHO05D000336 5.1e-06 55.5 71 31.0
AL6G49050 Arabidopsis lyrata HOM05D000710 ORTHO05D000336 6.7e-06 55.1 102 36.3
BcaB01g01916 Brassica carinata HOM05D000710 ORTHO05D000336 6.7e-06 55.1 81 33.3
BraA09t35936Z Brassica rapa HOM05D000710 ORTHO05D000336 6.7e-06 55.1 153 29.4
Aa31LG9G9000 Aethionema arabicum HOM05D000710 ORTHO05D000336 8.7e-06 54.7 69 34.8
A09p02890 Brassica napus HOM05D000710 ORTHO05D000336 8.7e-06 54.7 105 30.5
BNapus_Darmor_BZH_scaffold_38p00510 Brassica napus HOM05D000710 ORTHO05D000336 8.7e-06 54.7 76 34.2
BolC2t07180H Brassica oleracea HOM05D000710 ORTHO05D000336 8.7e-06 54.7 76 34.2
Carub.0006s3342 Capsella rubella HOM05D000710 ORTHO05D000336 8.7e-06 54.7 86 38.4
QL05p054202 Quercus lobata HOM05D000710 ORTHO05D000336 8.7e-06 54.7 91 35.2


User provided reference genes

Program Settings