Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 0.0e+00 1234.6 612 100.0
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.0e-256 889.0 631 71.6
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.0e-252 876.7 630 69.5
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 2.2e-250 869.0 628 68.0
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 3.8e-247 858.2 627 67.3
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.7e-245 852.0 628 68.2
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.4e-244 849.7 627 67.3
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 3.0e-244 848.6 637 67.8
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 5.1e-244 847.8 630 67.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 2.0e-243 845.9 594 70.5
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 5.7e-243 844.3 626 67.3
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 7.4e-243 844.0 672 62.2
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 4.8e-242 841.3 627 66.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 6.3e-242 840.9 627 66.2
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.1e-241 840.1 628 66.9
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.1e-241 840.1 627 65.9
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.4e-241 839.7 628 67.7
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 4.5e-240 834.7 625 66.2
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 8.5e-239 830.5 628 64.5
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 4.2e-238 828.2 627 65.4
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 9.4e-238 827.0 636 64.8
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 8.8e-236 820.5 626 65.2
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 5.7e-235 817.8 632 64.1
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 2.2e-234 815.8 625 65.3
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 4.8e-234 814.7 610 67.2
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 4.8e-234 814.7 628 64.6
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 5.3e-233 811.2 571 68.5
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 5.3e-233 811.2 636 64.0
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.6e-232 809.7 628 63.5
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 3.5e-232 808.5 627 64.3
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.3e-231 806.6 627 63.8
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 2.2e-231 805.8 626 64.2
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 8.5e-231 803.9 629 64.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.5e-230 802.4 590 66.8
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 3.2e-230 802.0 631 64.3
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 5.5e-230 801.2 631 63.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.2e-229 800.0 630 64.3
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 3.6e-229 798.5 628 63.7
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 3.6e-229 798.5 652 62.3
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 6.1e-229 797.7 632 62.7
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.0e-228 797.0 629 64.4
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.8e-228 796.2 625 63.5
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.0e-228 795.0 629 63.6
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 8.8e-228 793.9 626 63.4
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.2e-227 793.5 626 64.2
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 1.2e-227 793.5 626 63.3
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.5e-227 793.1 597 66.2
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 2.0e-227 792.7 625 63.4
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.6e-227 792.3 625 63.5
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 2.8e-226 788.9 625 63.4
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.1e-225 786.9 626 62.8
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.4e-225 786.6 628 62.9
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 4.1e-225 785.0 626 61.7
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 7.0e-225 784.3 633 63.3
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.2e-224 783.5 628 63.5
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.0e-224 782.7 627 62.2
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 4.5e-224 781.6 628 63.1
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.0e-223 780.4 626 61.2
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.0e-223 780.4 595 64.5
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 5.0e-223 778.1 632 63.4
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.2e-222 775.4 627 62.7
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 4.2e-222 775.0 629 62.5
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 5.5e-222 774.6 630 62.9
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 7.2e-222 774.2 633 62.4
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.2e-221 773.5 647 61.8
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.4e-220 770.0 592 66.0
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.5e-219 766.5 590 64.1
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.3e-218 763.5 629 62.5
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 1.0e-215 753.8 621 62.5
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.7e-215 753.1 627 59.8
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 8.6e-215 750.7 631 59.4
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.9e-214 749.6 633 60.5
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 2.5e-214 749.2 623 61.6
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 5.6e-214 748.0 629 60.3
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 6.1e-213 744.6 633 59.6
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 5.2e-212 741.5 583 63.3
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.2e-211 740.3 588 63.6
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 8.3e-210 734.2 569 63.4
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.1e-209 733.8 619 60.7
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.4e-209 733.4 628 59.2
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 2.4e-209 732.6 629 58.7
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 9.2e-209 730.7 631 58.8
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 9.2e-209 730.7 631 58.8
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.2e-208 730.3 629 58.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 5.6e-206 721.5 627 60.3
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 6.4e-202 708.0 621 59.4
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 8.6e-199 697.6 629 56.8
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.1e-196 690.6 566 60.8
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 4.6e-192 675.2 624 54.5
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 9.9e-187 657.5 604 55.3
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 4.2e-177 625.5 443 69.3
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.6e-173 613.6 495 62.8
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 3.0e-167 592.8 453 66.4
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 2.5e-166 589.7 635 48.7
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.3e-165 587.4 417 69.1
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 4.3e-158 562.4 643 46.7
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 3.4e-155 552.7 451 63.0
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 2.5e-150 536.6 395 65.1
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 3.3e-142 509.6 598 45.8
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 7.4e-142 508.4 630 44.6
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.4e-140 504.2 400 64.0
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 7.7e-131 471.9 416 60.3
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.7e-114 417.5 587 43.4
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 3.7e-109 399.8 417 53.2
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 8.3e-93 345.5 769 31.1
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.5e-86 322.4 271 62.0
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.9e-45 187.6 173 54.3
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.4e-44 185.3 179 52.5
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 2.5e-41 174.5 210 41.9
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.6e-35 153.7 151 53.6
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 8.7e-34 149.4 128 57.8
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 5.9e-22 110.2 81 65.4
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.0e-18 99.4 77 66.2
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 6.5e-13 80.1 85 45.9
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 4.1e-07 60.8 47 63.8


User provided reference genes

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