Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0460 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 7.6e-129 463.8 223 100.0
TAR624G1207 Trochodendron aralioides HOM05D004731 ORTHO05D005577 4.1e-106 388.3 225 82.7
Manes.12G076000 Manihot esculenta HOM05D004731 ORTHO05D005577 9.1e-106 387.1 235 78.7
vmacro12222 Vaccinium macrocarpon HOM05D004731 ORTHO05D005577 1.5e-105 386.3 224 81.7
Gorai.013G099800 Gossypium raimondii HOM05D004731 ORTHO05D005577 5.0e-104 381.3 235 77.9
Gohir.A13G093600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 6.5e-104 380.9 235 77.9
Eucgr.K00802 Eucalyptus grandis HOM05D004731 ORTHO05D005577 1.6e-102 376.3 234 79.1
CiPaw.03G162000 Carya illinoinensis HOM05D004731 ORTHO05D005577 2.1e-102 375.9 234 77.4
Actinidia09705 Actinidia chinensis HOM05D004731 ORTHO05D005577 2.7e-102 375.6 235 76.2
Potri.017G036900 Populus trichocarpa HOM05D004731 ORTHO05D005577 2.7e-102 375.6 234 78.6
Gohir.A03G109600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 3.6e-102 375.2 235 78.3
Potri.007G122900 Populus trichocarpa HOM05D004731 ORTHO05D005577 6.1e-102 374.4 235 78.3
Cfa014429 Carpinus fangiana HOM05D004731 ORTHO05D005577 1.8e-101 372.9 235 76.2
MBI02_g10107_MAGBIO Magnolia biondii HOM05D004731 ORTHO05D005577 2.3e-101 372.5 221 81.0
Cpa.g.sc8.225 Carica papaya HOM05D004731 ORTHO05D005577 3.9e-101 371.7 233 76.8
CSS0044333 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 6.7e-101 370.9 234 76.5
Ciclev10014655m.g Citrus clementina HOM05D004731 ORTHO05D005577 6.7e-101 370.9 234 76.1
CsaV3_2G035120 Cucumis sativus L. HOM05D004731 ORTHO05D005577 6.7e-101 370.9 235 76.2
QL08p033580 Quercus lobata HOM05D004731 ORTHO05D005577 6.7e-101 370.9 232 75.9
Sabra07G0099600 Salix brachista HOM05D004731 ORTHO05D005577 8.8e-101 370.5 235 77.0
Thecc.02G312600 Theobroma cacao HOM05D004731 ORTHO05D005577 8.8e-101 370.5 235 75.7
CAN.G921.14 Capsicum annuum HOM05D004731 ORTHO05D005577 1.1e-100 370.2 234 76.5
ClCG02G008490 Citrullus lanatus HOM05D004731 ORTHO05D005577 1.5e-100 369.8 242 74.8
Gorai.005G150300 Gossypium raimondii HOM05D004731 ORTHO05D005577 1.5e-100 369.8 234 76.5
QL08p033547 Quercus lobata HOM05D004731 ORTHO05D005577 1.5e-100 369.8 232 75.4
Aqoxy4G01979 Aquilegia oxysepala HOM05D004731 ORTHO05D005577 2.0e-100 369.4 234 76.9
PGR142G3606 Punica granatum HOM05D004731 ORTHO05D005577 2.6e-100 369.0 234 77.4
Sed0023583 Sechium edule HOM05D004731 ORTHO05D005577 2.6e-100 369.0 235 76.2
CSS0029719 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 3.3e-100 368.6 234 75.6
Gohir.D02G134400 Gossypium hirsutum HOM05D004731 ORTHO05D005577 4.4e-100 368.2 235 76.6
Prupe.3G219100 Prunus persica HOM05D004731 ORTHO05D005577 4.4e-100 368.2 234 76.1
DCAR_012950 Daucus carota HOM05D004731 ORTHO05D005577 5.7e-100 367.9 233 75.5
Peaxi162Scf00007g01115 Petunia axillaris HOM05D004731 ORTHO05D005577 5.7e-100 367.9 234 76.5
PSO675G8406 Papaver somniferum HOM05D004731 ORTHO05D005577 9.7e-100 367.1 235 77.4
Manes.13G072200 Manihot esculenta HOM05D004731 ORTHO05D005577 1.7e-99 366.3 235 75.3
Nn1g07047 Nelumbo nucifera HOM05D004731 ORTHO05D005577 1.7e-99 366.3 235 76.2
CANSAT64G0826 Cannabis sativa HOM05D004731 ORTHO05D005577 2.2e-99 365.9 234 76.1
Atru.chr6.3161 Acer truncatum HOM05D004731 ORTHO05D005577 3.7e-99 365.2 234 75.6
EL10Ac8g18891 Beta vulgaris HOM05D004731 ORTHO05D005577 3.7e-99 365.2 225 75.6
PSO541G0248 Papaver somniferum HOM05D004731 ORTHO05D005577 3.7e-99 365.2 235 77.0
DCAR_021183 Daucus carota HOM05D004731 ORTHO05D005577 6.3e-99 364.4 235 74.0
Rhsim06G0159200 Rhododendron simsii HOM05D004731 ORTHO05D005577 6.3e-99 364.4 195 85.6
RcHm_v2.0_Chr2g0159821 Rosa chinensis HOM05D004731 ORTHO05D005577 6.3e-99 364.4 233 76.0
TWI75G0012 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 1.4e-98 363.2 233 76.0
TWI36G0780 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 1.8e-98 362.8 235 75.3
MELO3C019243.2 Cucumis melo HOM05D004731 ORTHO05D005577 2.4e-98 362.5 195 84.1
FvH4_6g43440 Fragaria vesca HOM05D004731 ORTHO05D005577 3.1e-98 362.1 233 75.1
Nitab4.5_0001176g0080 Nicotiana tabacum HOM05D004731 ORTHO05D005577 4.1e-98 361.7 234 75.2
Sopen07g026110 Solanum pennellii HOM05D004731 ORTHO05D005577 5.3e-98 361.3 234 73.5
MD09G1106500 Malus domestica HOM05D004731 ORTHO05D005577 9.1e-98 360.5 234 74.8
Hund24408 Selenicereus undatus HOM05D004731 ORTHO05D005577 1.2e-97 360.1 235 73.6
PGSC0003DMG400025487 Solanum tuberosum HOM05D004731 ORTHO05D005577 1.2e-97 360.1 234 73.5
Nitab4.5_0010201g0030 Nicotiana tabacum HOM05D004731 ORTHO05D005577 1.6e-97 359.8 234 74.8
Nn1g03615 Nelumbo nucifera HOM05D004731 ORTHO05D005577 2.0e-97 359.4 235 73.6
Oeu011087.1 Olea europaea HOM05D004731 ORTHO05D005577 2.0e-97 359.4 234 73.9
Aa31LG8G8350 Aethionema arabicum HOM05D004731 ORTHO05D005577 2.6e-97 359.0 235 74.0
Nitab4.5_0003509g0010 Nicotiana tabacum HOM05D004731 ORTHO05D005577 4.5e-97 358.2 234 74.4
Lsat_1_v5_gn_8_128420 Lactuca sativa HOM05D004731 ORTHO05D005577 5.9e-97 357.8 233 74.2
ECA233G0706 Erigeron canadensis HOM05D004731 ORTHO05D005577 1.0e-96 357.1 234 74.4
ATR0697G164 Amborella trichopoda HOM05D004731 ORTHO05D005577 1.7e-96 356.3 218 77.1
AUR62028388 Chenopodium quinoa HOM05D004731 ORTHO05D005577 2.2e-96 355.9 234 73.1
Migut.M00410 Erythranthe guttata HOM05D004731 ORTHO05D005577 2.9e-96 355.5 235 72.3
ATR0697G058 Amborella trichopoda HOM05D004731 ORTHO05D005577 3.8e-96 355.1 215 78.6
FAN09G0477 Fragaria x ananassa HOM05D004731 ORTHO05D005577 5.0e-96 354.8 194 83.0
Ah.09g228590 Amaranthus hybridus HOM05D004731 ORTHO05D005577 8.5e-96 354.0 226 75.7
ATR0697G137 Amborella trichopoda HOM05D004731 ORTHO05D005577 8.5e-96 354.0 192 84.4
FAN02G3012 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.1e-95 353.6 194 82.5
FAN05G5305 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.1e-95 353.6 194 82.5
Lj1P757T15 Lonicera japonica HOM05D004731 ORTHO05D005577 1.1e-95 353.6 235 74.5
AUR62039771 Chenopodium quinoa HOM05D004731 ORTHO05D005577 1.5e-95 353.2 234 73.5
Thhalv10022122m.g Eutrema salsugineum HOM05D004731 ORTHO05D005577 1.5e-95 353.2 235 73.6
FAN14G3935 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.5e-95 353.2 194 82.5
SalBow7G1245 Salvia bowleyana HOM05D004731 ORTHO05D005577 1.5e-95 353.2 195 82.6
BcaB06g26278 Brassica carinata HOM05D004731 ORTHO05D005577 2.5e-95 352.4 235 73.6
BcaC05g28137 Brassica carinata HOM05D004731 ORTHO05D005577 2.5e-95 352.4 235 73.6
A05p27010 Brassica napus HOM05D004731 ORTHO05D005577 2.5e-95 352.4 235 73.6
C05p41690 Brassica napus HOM05D004731 ORTHO05D005577 2.5e-95 352.4 235 73.6
BolC5t32904H Brassica oleracea HOM05D004731 ORTHO05D005577 2.5e-95 352.4 235 73.6
CARHR097670 Cardamine hirsuta HOM05D004731 ORTHO05D005577 3.2e-95 352.1 235 73.6
DCAR_019287 Daucus carota HOM05D004731 ORTHO05D005577 3.2e-95 352.1 235 73.2
Sp3g19730 Schrenkiella parvula HOM05D004731 ORTHO05D005577 3.2e-95 352.1 235 74.0
BraA05t21584Z Brassica rapa HOM05D004731 ORTHO05D005577 5.5e-95 351.3 235 73.2
SGA_v2.0_scaffold34G13870 Striga asiatica HOM05D004731 ORTHO05D005577 5.5e-95 351.3 192 81.8
BcaB04g20569 Brassica carinata HOM05D004731 ORTHO05D005577 9.4e-95 350.5 234 73.5
A03p42440 Brassica napus HOM05D004731 ORTHO05D005577 9.4e-95 350.5 235 73.2
BraA03t13397Z Brassica rapa HOM05D004731 ORTHO05D005577 9.4e-95 350.5 235 73.2
THA.LOC104808494 Tarenaya hassleriana HOM05D004731 ORTHO05D005577 9.4e-95 350.5 236 73.3
HanXRQChr04g0110581 Helianthus annuus HOM05D004731 ORTHO05D005577 1.2e-94 350.1 234 72.6
BcaB04g20567 Brassica carinata HOM05D004731 ORTHO05D005577 1.6e-94 349.7 235 73.2
BcaC01g03487 Brassica carinata HOM05D004731 ORTHO05D005577 2.1e-94 349.4 235 72.8
C03p51920 Brassica napus HOM05D004731 ORTHO05D005577 2.1e-94 349.4 235 72.8
BolC3t17478H Brassica oleracea HOM05D004731 ORTHO05D005577 2.1e-94 349.4 235 72.8
GSVIVG01030608001 Vitis vinifera HOM05D004731 ORTHO05D005577 2.1e-94 349.4 219 77.2
Carub.0003s2177 Capsella rubella HOM05D004731 ORTHO05D005577 8.0e-94 347.4 235 72.8
Phvul.011G105500 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 1.0e-93 347.1 234 71.4
Phvul.011G106801 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 1.0e-93 347.1 234 71.4
AL3G35840 Arabidopsis lyrata HOM05D004731 ORTHO05D005577 1.8e-93 346.3 230 73.5
Glyma.12G100500 Glycine max HOM05D004731 ORTHO05D005577 1.8e-93 346.3 234 70.5
Psat7g179960 Pisum sativum HOM05D004731 ORTHO05D005577 3.0e-93 345.5 233 72.1
AT3G21720 Arabidopsis thaliana HOM05D004731 ORTHO05D005577 5.2e-93 344.7 230 73.5
Lalb_Chr19g0135731 Lupinus albus HOM05D004731 ORTHO05D005577 8.8e-93 344.0 234 70.9
HPP92_012326 Vanilla planifolia HOM05D004731 ORTHO05D005577 8.8e-93 344.0 233 71.7
MD17G1094300 Malus domestica HOM05D004731 ORTHO05D005577 2.0e-92 342.8 189 83.1
VMungo1127G2299 Vigna mungo HOM05D004731 ORTHO05D005577 2.6e-92 342.4 231 71.0
SEGI_22707 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 1.3e-91 340.1 224 73.2
Lj3g0018668 Lotus japonicus HOM05D004731 ORTHO05D005577 1.7e-91 339.7 234 70.5
Glyma.06G303200 Glycine max HOM05D004731 ORTHO05D005577 2.2e-91 339.3 234 69.2
unitig_899.g15245 Utricularia gibba HOM05D004731 ORTHO05D005577 2.2e-91 339.3 195 77.4
arahy.Tifrunner.gnm1.ann1.TKPZ56 Arachis hypogaea HOM05D004731 ORTHO05D005577 3.7e-91 338.6 232 71.1
Os07g0529000 Oryza sativa ssp. japonica HOM05D004731 ORTHO05D005577 4.8e-91 338.2 231 71.4
arahy.Tifrunner.gnm1.ann1.X0NGMJ Arachis hypogaea HOM05D004731 ORTHO05D005577 1.8e-90 336.3 232 70.7
Medtr4g046757 Medicago truncatula HOM05D004731 ORTHO05D005577 3.1e-90 335.5 236 68.2
Zm00001eb323090 Zea mays HOM05D004731 ORTHO05D005577 1.2e-89 333.6 228 71.1
SEGI_12486 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 4.5e-89 331.6 227 70.0
Ca_27733_v3 Cicer arietinum L. HOM05D004731 ORTHO05D005577 4.2e-87 325.1 245 65.7
Lalb_Chr03g0028811 Lupinus albus HOM05D004731 ORTHO05D005577 1.8e-85 319.7 193 74.1
Cc05_g04940 Coffea canephora HOM05D004731 ORTHO05D005577 7.5e-84 314.3 225 68.4
Haze_12887 Corylus avellana HOM05D004731 ORTHO05D005577 1.5e-79 300.1 245 63.7
AagrBONN_evm.TU.Sc2ySwM_344.2376 Anthoceros agrestis HOM05D004731 ORTHO05D005577 4.7e-78 295.0 186 68.8
CDE05G2280 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 1.5e-76 290.0 137 97.1
Gohir.D13G087500 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.5e-76 290.0 152 85.5
SMO196G0149 Selaginella moellendorffii HOM05D004731 ORTHO05D005577 3.4e-76 288.9 224 61.2
Mapoly0023s0108 Marchantia polymorpha HOM05D004731 ORTHO05D005577 2.0e-73 279.6 208 62.0
CBR_g8290 Chara braunii HOM05D004731 ORTHO05D005577 2.7e-73 279.3 209 61.7
Pp3c7_2440 Physcomitrium patens HOM05D004731 ORTHO05D005577 3.5e-73 278.9 225 60.4
Pp3c7_2470 Physcomitrium patens HOM05D004731 ORTHO05D005577 3.5e-73 278.9 225 60.4
Mapoly0115s0061 Marchantia polymorpha HOM05D004731 ORTHO05D005577 1.4e-69 266.9 202 60.9
COL.COLO4_27682 Corchorus olitorius HOM05D004731 ORTHO05D005577 3.0e-69 265.8 178 73.0
Dinv02740 Davidia involucrata HOM05D004731 ORTHO05D005577 4.1e-66 255.4 178 70.2
Cfa025720 Carpinus fangiana HOM05D004731 ORTHO05D005577 8.9e-53 211.1 207 50.7
Peaxi162Scf00932g00022 Petunia axillaris HOM05D004731 ORTHO05D005577 8.3e-51 204.5 113 82.3
Cfa027059 Carpinus fangiana HOM05D004731 ORTHO05D005577 2.9e-43 179.5 187 42.8
Dinv39693 Davidia involucrata HOM05D004731 ORTHO05D005577 3.1e-37 159.5 90 80.0
CDE05G2484 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 8.7e-32 141.4 71 95.8
Cre06.g282800 Chlamydomonas reinhardtii HOM05D004731 ORTHO05D005577 3.6e-30 136.0 163 41.1
BcaB04g20566 Brassica carinata HOM05D004731 ORTHO05D005577 5.3e-29 132.1 79 74.7
Haze_27171 Corylus avellana HOM05D004731 ORTHO05D005577 4.5e-28 129.0 170 39.4
HPP92_012390 Vanilla planifolia HOM05D004731 ORTHO05D005577 5.1e-16 89.0 83 65.1
HPP92_012389 Vanilla planifolia HOM05D004731 ORTHO05D005577 1.3e-14 84.3 48 75.0


User provided reference genes

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