Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 5.3e-118 427.6 197 100.0
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 1.5e-80 303.1 185 70.8
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 1.7e-79 299.7 185 67.6
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 6.4e-79 297.7 185 66.5
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 1.1e-78 297.0 185 67.6
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 1.9e-78 296.2 185 66.5
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 5.4e-78 294.7 184 67.9
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 9.2e-78 293.9 185 67.6
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 9.2e-78 293.9 185 65.9
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 9.2e-78 293.9 185 65.4
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 2.7e-77 292.4 185 69.7
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 3.5e-77 292.0 185 65.9
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 1.0e-76 290.4 185 67.6
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 1.0e-76 290.4 185 65.4
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 1.0e-76 290.4 186 66.7
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 1.3e-76 290.0 185 64.9
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 1.3e-76 290.0 185 66.5
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 1.7e-76 289.7 186 67.7
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 1.7e-76 289.7 185 64.3
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 2.3e-76 289.3 189 65.6
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 2.3e-76 289.3 185 66.5
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 3.0e-76 288.9 187 66.3
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 3.9e-76 288.5 185 65.4
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 3.9e-76 288.5 186 67.2
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 3.9e-76 288.5 186 67.2
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 1.1e-75 287.0 185 65.9
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 1.5e-75 286.6 185 65.4
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.5e-75 286.6 185 67.6
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 1.9e-75 286.2 185 66.5
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 2.5e-75 285.8 189 67.7
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 3.3e-75 285.4 185 65.9
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 3.3e-75 285.4 185 63.2
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 4.3e-75 285.0 185 66.5
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 9.6e-75 283.9 185 62.7
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 1.2e-74 283.5 185 64.3
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 2.1e-74 282.7 186 66.1
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 2.8e-74 282.3 185 61.6
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 6.2e-74 281.2 185 63.8
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 6.2e-74 281.2 185 61.1
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 6.2e-74 281.2 185 65.4
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 6.2e-74 281.2 183 62.8
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 8.1e-74 280.8 185 65.4
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.8e-73 279.6 185 60.5
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 2.4e-73 279.3 185 63.2
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 3.1e-73 278.9 184 66.3
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 3.1e-73 278.9 185 64.3
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 3.1e-73 278.9 185 65.9
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 4.0e-73 278.5 185 61.6
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 5.2e-73 278.1 185 60.5
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 8.9e-73 277.3 191 63.9
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 8.9e-73 277.3 185 61.6
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 1.2e-72 276.9 187 61.5
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 2.0e-72 276.2 185 61.1
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 3.4e-72 275.4 185 59.5
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 3.4e-72 275.4 184 65.8
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 3.4e-72 275.4 191 64.4
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 4.4e-72 275.0 185 60.5
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 5.8e-72 274.6 215 57.7
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 5.8e-72 274.6 185 61.6
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 5.8e-72 274.6 201 60.7
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 5.8e-72 274.6 187 64.7
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 7.6e-72 274.2 185 63.2
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 7.6e-72 274.2 191 64.4
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 1.3e-71 273.5 192 63.5
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 1.3e-71 273.5 188 64.4
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.3e-71 273.5 185 61.1
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.3e-71 273.5 185 63.8
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 1.7e-71 273.1 184 63.6
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 2.2e-71 272.7 185 58.9
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.2e-71 272.7 185 61.1
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 2.2e-71 272.7 184 61.4
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 2.9e-71 272.3 185 58.9
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 4.9e-71 271.6 191 63.9
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 1.1e-70 270.4 191 62.8
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.9e-70 269.6 197 60.9
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 4.2e-70 268.5 186 64.5
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 4.2e-70 268.5 185 62.2
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 5.4e-70 268.1 192 63.0
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 7.1e-70 267.7 184 62.0
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 9.3e-70 267.3 185 61.6
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 2.7e-69 265.8 194 62.9
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 2.7e-69 265.8 194 62.4
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 3.5e-69 265.4 185 60.0
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 3.5e-69 265.4 185 59.5
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 4.6e-69 265.0 185 60.5
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 6.0e-69 264.6 185 60.5
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 1.3e-68 263.5 188 60.6
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 1.7e-68 263.1 194 62.4
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 1.7e-68 263.1 194 62.4
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 1.7e-68 263.1 184 58.7
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 3.0e-68 262.3 189 57.1
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 3.3e-67 258.8 184 60.3
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.3e-66 256.9 174 60.9
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.6e-66 256.5 173 61.8
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 2.1e-66 256.1 186 59.7
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 2.6e-64 249.2 189 60.3
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.6e-64 249.2 191 59.2
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 1.3e-63 246.9 160 66.2
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 1.7e-63 246.5 172 59.3
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 2.4e-62 242.7 184 58.7
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 1.2e-61 240.4 195 56.9
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 1.6e-58 229.9 185 54.6
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 1.8e-57 226.5 187 56.7
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 3.2e-54 215.7 132 68.9
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 7.9e-53 211.1 133 68.4
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.1e-51 207.2 199 48.7
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 4.3e-51 205.3 196 50.0
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 5.3e-49 198.4 129 63.6
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.4e-46 190.3 197 43.1
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 8.7e-44 181.0 185 42.7
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 1.5e-43 180.3 185 47.6
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.9e-39 166.0 205 39.5
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 1.4e-38 163.7 96 72.9
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 2.7e-37 159.5 95 70.5
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 2.2e-34 149.8 96 64.6
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 8.5e-31 137.9 96 61.5
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 5.2e-12 75.5 182 30.8
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 9.1e-09 64.7 233 24.5
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 2.0e-08 63.5 47 57.4
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 1.0e-07 61.2 211 25.1
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 1.3e-07 60.8 40 62.5


User provided reference genes

Program Settings