Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.8e-87 325.9 164 100.0
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 6.5e-77 290.8 165 91.5
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 5.4e-55 218.0 166 69.9
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 1.6e-54 216.5 163 69.3
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.6e-54 216.5 166 69.3
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 2.0e-54 216.1 166 69.3
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 2.7e-54 215.7 165 68.5
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 1.7e-53 213.0 165 68.5
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 5.0e-53 211.5 166 68.7
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 5.0e-53 211.5 166 68.7
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 5.0e-53 211.5 164 68.3
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 5.0e-53 211.5 164 70.7
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 8.6e-53 210.7 163 66.9
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 3.3e-52 208.8 168 67.3
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 5.5e-52 208.0 165 66.7
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 7.2e-52 207.6 165 67.3
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.2e-51 206.8 165 67.3
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 1.2e-51 206.8 165 66.7
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 3.6e-51 205.3 165 65.5
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 3.6e-51 205.3 167 66.5
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 6.1e-51 204.5 165 65.5
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 8.0e-51 204.1 164 67.1
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.0e-50 203.8 164 66.5
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.4e-50 203.4 166 65.1
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 2.3e-50 202.6 165 65.5
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 3.0e-50 202.2 164 65.9
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 5.2e-50 201.4 164 65.9
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 6.8e-50 201.1 164 64.6
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 6.8e-50 201.1 164 64.6
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 8.9e-50 200.7 166 65.1
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 8.9e-50 200.7 166 65.1
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 8.9e-50 200.7 164 65.9
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.5e-49 199.9 164 63.4
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 1.5e-49 199.9 163 63.2
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 2.0e-49 199.5 166 66.3
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 2.0e-49 199.5 164 64.0
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.4e-49 198.7 165 61.2
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 3.4e-49 198.7 165 62.4
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.4e-49 198.4 164 64.0
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 4.4e-49 198.4 165 63.6
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 4.4e-49 198.4 166 66.3
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 7.5e-49 197.6 175 62.3
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 9.8e-49 197.2 168 64.9
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 1.7e-48 196.4 164 63.4
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.7e-48 196.4 132 77.3
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 1.7e-48 196.4 166 62.7
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 2.2e-48 196.1 166 64.5
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.2e-48 196.1 162 64.2
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 2.8e-48 195.7 166 63.9
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 8.3e-48 194.1 165 61.8
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 8.3e-48 194.1 166 63.3
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.8e-47 193.0 162 63.6
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.1e-47 191.8 164 62.2
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 4.1e-47 191.8 164 62.2
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 5.4e-47 191.4 166 60.2
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 7.0e-47 191.0 164 62.2
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 7.0e-47 191.0 166 62.7
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 7.0e-47 191.0 163 62.0
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 7.0e-47 191.0 160 60.0
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 9.2e-47 190.7 164 64.0
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 1.2e-46 190.3 166 65.7
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 2.7e-46 189.1 164 62.8
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 5.9e-46 188.0 162 61.7
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 5.9e-46 188.0 164 62.2
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 7.8e-46 187.6 168 62.5
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 3.8e-45 185.3 155 64.5
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 3.8e-45 185.3 167 59.9
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 5.0e-45 184.9 163 62.6
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 1.5e-44 183.3 163 62.6
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 1.5e-44 183.3 167 62.3
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 3.3e-44 182.2 162 60.5
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.3e-44 182.2 162 60.5
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 5.6e-44 181.4 166 61.4
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 1.2e-43 180.3 162 59.9
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 3.6e-43 178.7 164 59.8
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.4e-42 176.8 151 62.3
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.4e-42 176.8 163 58.3
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 1.8e-42 176.4 163 56.4
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 1.8e-42 176.4 164 57.3
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 2.3e-42 176.0 121 75.2
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 4.0e-42 175.3 124 73.4
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 6.8e-42 174.5 163 55.8
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 8.9e-42 174.1 163 56.4
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 1.2e-41 173.7 124 72.6
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 2.0e-41 172.9 195 52.8
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 3.4e-41 172.2 165 60.6
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 5.8e-41 171.4 165 57.6
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 1.7e-40 169.9 165 55.8
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 2.2e-40 169.5 125 71.2
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 2.9e-40 169.1 163 57.7
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.9e-40 169.1 149 61.7
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 4.9e-40 168.3 164 55.5
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 8.3e-40 167.5 125 70.4
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 3.2e-39 165.6 123 68.3
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 5.4e-39 164.9 135 64.4
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 7.0e-39 164.5 119 68.9
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.2e-38 163.7 222 47.7
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.3e-37 160.2 125 64.8
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 1.3e-37 160.2 127 63.8
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 1.7e-37 159.8 125 64.0
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.7e-37 159.8 125 64.0
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 1.7e-37 159.8 125 64.0
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 6.6e-37 157.9 161 56.5
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 8.6e-37 157.5 105 76.2
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 4.7e-35 151.8 147 55.8
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.4e-34 150.2 125 63.2
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 5.2e-34 148.3 125 61.6
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 5.2e-34 148.3 168 50.0
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 5.2e-34 148.3 165 55.2
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 6.8e-34 147.9 165 51.5
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 9.8e-33 144.1 114 63.2
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 5.4e-31 138.3 162 50.6
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.6e-30 136.7 170 48.8
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 8.6e-29 131.0 163 48.5
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 2.8e-27 125.9 124 53.2
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 5.2e-26 121.7 165 45.5
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 2.0e-25 119.8 129 54.3
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.2e-24 116.3 112 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 4.9e-24 115.2 102 56.9
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 4.1e-23 112.1 99 57.6
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 9.2e-23 110.9 165 44.2
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 5.1e-21 105.1 104 51.9
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 4.7e-19 98.6 110 51.8
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 4.7e-19 98.6 107 51.4
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-15 85.5 137 38.7
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 4.2e-15 85.5 87 52.9
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 3.5e-14 82.4 84 57.1
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 6.0e-14 81.6 99 44.4
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 2.5e-12 76.3 50 66.0
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.8e-10 70.1 58 67.2
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.9e-07 60.1 61 59.0
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 7.8e-06 54.7 115 34.8


User provided reference genes

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