Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0295 Ceratophyllum demersum HOM05D004661 ORTHO05D005827 1.8e-53 212.2 101 100.0
MBI06_g18796_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 3.7e-38 161.4 101 68.3
Solyc04g076020.3 Solanum lycopersicum HOM05D004661 ORTHO05D005827 5.3e-37 157.5 101 70.3
COL.COLO4_35194 Corchorus olitorius HOM05D004661 ORTHO05D005827 6.9e-37 157.1 101 71.3
Aqoxy5G01331 Aquilegia oxysepala HOM05D004661 ORTHO05D005827 2.6e-36 155.2 101 70.3
Potri.005G158300 Populus trichocarpa HOM05D004661 ORTHO05D005827 2.6e-36 155.2 101 68.3
Gohir.A06G032640 Gossypium hirsutum HOM05D004661 ORTHO05D005827 5.9e-36 154.1 101 70.3
GSVIVG01009135001 Vitis vinifera HOM05D004661 ORTHO05D005827 7.6e-36 153.7 101 68.3
Sopen04g029970 Solanum pennellii HOM05D004661 ORTHO05D005827 1.3e-35 152.9 101 69.3
ATR0022G033 Amborella trichopoda HOM05D004661 ORTHO05D005827 1.7e-35 152.5 101 69.3
Gohir.D06G032700 Gossypium hirsutum HOM05D004661 ORTHO05D005827 2.2e-35 152.1 101 69.3
Gorai.010G036000 Gossypium raimondii HOM05D004661 ORTHO05D005827 2.2e-35 152.1 101 69.3
Lj4A732G49 Lonicera japonica HOM05D004661 ORTHO05D005827 2.9e-35 151.8 101 66.3
TWI12G0736 Tripterygium wilfordii HOM05D004661 ORTHO05D005827 2.9e-35 151.8 101 68.3
TAR376G0508 Trochodendron aralioides HOM05D004661 ORTHO05D005827 2.9e-35 151.8 101 68.3
Ciclev10000370m.g Citrus clementina HOM05D004661 ORTHO05D005827 3.8e-35 151.4 101 69.3
MD08G1192800 Malus domestica HOM05D004661 ORTHO05D005827 5.0e-35 151.0 101 68.3
Prupe.1G527400 Prunus persica HOM05D004661 ORTHO05D005827 6.5e-35 150.6 103 68.9
Thecc.08G067600 Theobroma cacao HOM05D004661 ORTHO05D005827 6.5e-35 150.6 101 67.3
Migut.N02866 Erythranthe guttata HOM05D004661 ORTHO05D005827 8.4e-35 150.2 101 66.3
Oeu016837.1 Olea europaea HOM05D004661 ORTHO05D005827 8.4e-35 150.2 101 67.3
Cc10_g15560 Coffea canephora HOM05D004661 ORTHO05D005827 1.1e-34 149.8 101 66.3
Cfa013702 Carpinus fangiana HOM05D004661 ORTHO05D005827 1.4e-34 149.4 101 68.3
DCAR_012867 Daucus carota HOM05D004661 ORTHO05D005827 1.4e-34 149.4 101 65.3
Nn5g29943 Nelumbo nucifera HOM05D004661 ORTHO05D005827 1.4e-34 149.4 101 68.3
Sed0012148 Sechium edule HOM05D004661 ORTHO05D005827 2.5e-34 148.7 101 65.3
Potri.002G103066 Populus trichocarpa HOM05D004661 ORTHO05D005827 3.2e-34 148.3 101 66.3
Sp6g32550 Schrenkiella parvula HOM05D004661 ORTHO05D005827 5.5e-34 147.5 101 67.3
A10p26740 Brassica napus HOM05D004661 ORTHO05D005827 7.2e-34 147.1 101 67.3
C09p65890 Brassica napus HOM05D004661 ORTHO05D005827 7.2e-34 147.1 101 67.3
BolC9t59411H Brassica oleracea HOM05D004661 ORTHO05D005827 7.2e-34 147.1 101 67.3
BraA10t44730Z Brassica rapa HOM05D004661 ORTHO05D005827 7.2e-34 147.1 101 67.3
CsaV3_3G047860 Cucumis sativus L. HOM05D004661 ORTHO05D005827 9.3e-34 146.7 101 64.4
QL09p017125 Quercus lobata HOM05D004661 ORTHO05D005827 9.3e-34 146.7 100 67.0
Sc26g0000230 Simmondsia chinensis HOM05D004661 ORTHO05D005827 9.3e-34 146.7 101 66.3
CSS0032958 Camellia sinensis var. sinensis HOM05D004661 ORTHO05D005827 1.6e-33 146.0 101 65.3
THA.LOC104799016 Tarenaya hassleriana HOM05D004661 ORTHO05D005827 1.6e-33 146.0 101 67.3
Atru.chr13.1050 Acer truncatum HOM05D004661 ORTHO05D005827 2.1e-33 145.6 101 67.3
PSO210G1320 Papaver somniferum HOM05D004661 ORTHO05D005827 2.7e-33 145.2 101 68.3
Manes.02G147000 Manihot esculenta HOM05D004661 ORTHO05D005827 3.5e-33 144.8 103 68.0
THA.LOC104814992 Tarenaya hassleriana HOM05D004661 ORTHO05D005827 3.5e-33 144.8 101 67.3
Gohir.A05G221400 Gossypium hirsutum HOM05D004661 ORTHO05D005827 4.6e-33 144.4 101 65.3
Aa31LG3G16190 Aethionema arabicum HOM05D004661 ORTHO05D005827 1.3e-32 142.9 101 64.4
RcHm_v2.0_Chr7g0237521 Rosa chinensis HOM05D004661 ORTHO05D005827 1.8e-32 142.5 103 65.0
Duzib093G2117 Durio zibethinus HOM05D004661 ORTHO05D005827 2.3e-32 142.1 101 67.3
AL6G21500 Arabidopsis lyrata HOM05D004661 ORTHO05D005827 3.0e-32 141.7 101 63.4
Hund27004 Selenicereus undatus HOM05D004661 ORTHO05D005827 3.0e-32 141.7 101 63.4
Ah.05g170630 Amaranthus hybridus HOM05D004661 ORTHO05D005827 3.9e-32 141.4 101 64.4
FvH4_5g35830 Fragaria vesca HOM05D004661 ORTHO05D005827 3.9e-32 141.4 103 66.0
FAN18G2343 Fragaria x ananassa HOM05D004661 ORTHO05D005827 3.9e-32 141.4 103 66.0
AT5G10940 Arabidopsis thaliana HOM05D004661 ORTHO05D005827 5.1e-32 141.0 101 62.4
TWI56G1288 Tripterygium wilfordii HOM05D004661 ORTHO05D005827 5.1e-32 141.0 101 64.4
Thhalv10012761m.g Eutrema salsugineum HOM05D004661 ORTHO05D005827 6.7e-32 140.6 101 64.4
MSTRG.22174 Avicennia marina HOM05D004661 ORTHO05D005827 8.7e-32 140.2 101 66.3
CANSAT25G3216 Cannabis sativa HOM05D004661 ORTHO05D005827 8.7e-32 140.2 101 63.4
FAN04G0711 Fragaria x ananassa HOM05D004661 ORTHO05D005827 8.7e-32 140.2 103 65.0
Gohir.D05G224100 Gossypium hirsutum HOM05D004661 ORTHO05D005827 8.7e-32 140.2 101 64.4
Gorai.009G231600 Gossypium raimondii HOM05D004661 ORTHO05D005827 1.1e-31 139.8 101 64.4
vmacro21311 Vaccinium macrocarpon HOM05D004661 ORTHO05D005827 1.1e-31 139.8 101 60.4
Carub.0006s0943 Capsella rubella HOM05D004661 ORTHO05D005827 1.5e-31 139.4 101 63.4
Sed0023876 Sechium edule HOM05D004661 ORTHO05D005827 1.9e-31 139.0 101 61.4
EL10Ac1g01103 Beta vulgaris HOM05D004661 ORTHO05D005827 2.5e-31 138.7 101 61.4
ECA247G4144 Erigeron canadensis HOM05D004661 ORTHO05D005827 5.7e-31 137.5 101 64.4
Nitab4.5_0005723g0010 Nicotiana tabacum HOM05D004661 ORTHO05D005827 5.7e-31 137.5 101 64.4
Medtr3g100690 Medicago truncatula HOM05D004661 ORTHO05D005827 9.7e-31 136.7 103 65.0
Ca_15986_v3 Cicer arietinum L. HOM05D004661 ORTHO05D005827 2.2e-30 135.6 103 64.1
PGR042G3759 Punica granatum HOM05D004661 ORTHO05D005827 2.8e-30 135.2 101 64.4
TPR.G26024 Trifolium pratense HOM05D004661 ORTHO05D005827 2.8e-30 135.2 103 65.0
Psat5g045560 Pisum sativum HOM05D004661 ORTHO05D005827 6.3e-30 134.0 103 63.1
Actinidia10366 Actinidia chinensis HOM05D004661 ORTHO05D005827 1.1e-29 133.3 101 63.4
Cpa.g.sc608.2 Carica papaya HOM05D004661 ORTHO05D005827 1.1e-29 133.3 111 58.6
Lj1g0004448 Lotus japonicus HOM05D004661 ORTHO05D005827 9.0e-29 130.2 103 63.1
Pp3c15_6410 Physcomitrium patens HOM05D004661 ORTHO05D005827 9.0e-29 130.2 101 57.4
Lalb_Chr23g0270111 Lupinus albus HOM05D004661 ORTHO05D005827 1.2e-28 129.8 103 61.2
BcaC04g19274 Brassica carinata HOM05D004661 ORTHO05D005827 1.5e-28 129.4 92 65.2
AUR62027850 Chenopodium quinoa HOM05D004661 ORTHO05D005827 3.4e-28 128.3 119 56.3
VMungo1309G0150 Vigna mungo HOM05D004661 ORTHO05D005827 4.5e-28 127.9 103 60.2
Glyma.06G094900 Glycine max HOM05D004661 ORTHO05D005827 2.2e-27 125.6 103 63.1
Duzib041G0224 Durio zibethinus HOM05D004661 ORTHO05D005827 6.5e-27 124.0 106 61.3
Glyma.04G093100 Glycine max HOM05D004661 ORTHO05D005827 1.4e-26 122.9 103 62.1
AUR62019009 Chenopodium quinoa HOM05D004661 ORTHO05D005827 2.5e-26 122.1 129 51.2
Eucgr.F02126 Eucalyptus grandis HOM05D004661 ORTHO05D005827 2.5e-26 122.1 101 60.4
FAN13G1835 Fragaria x ananassa HOM05D004661 ORTHO05D005827 5.5e-26 120.9 93 61.3
Phvul.009G038100 Phaseolus vulgaris HOM05D004661 ORTHO05D005827 2.7e-25 118.6 103 58.3
SEGI_24481 Sequoiadendron giganteum HOM05D004661 ORTHO05D005827 3.6e-25 118.2 101 52.5
Zm00001eb401530 Zea mays HOM05D004661 ORTHO05D005827 3.6e-25 118.2 101 62.4
CiPaw.08G054000 Carya illinoinensis HOM05D004661 ORTHO05D005827 1.4e-24 116.3 72 72.2
SEGI_03893 Sequoiadendron giganteum HOM05D004661 ORTHO05D005827 1.4e-24 116.3 97 52.6
Lsat_1_v5_gn_1_2220 Lactuca sativa HOM05D004661 ORTHO05D005827 5.1e-24 114.4 101 54.5
Nitab4.5_0006922g0020 Nicotiana tabacum HOM05D004661 ORTHO05D005827 8.8e-24 113.6 68 70.6
Haze_22346 Corylus avellana HOM05D004661 ORTHO05D005827 1.1e-23 113.2 74 68.9
Rhsim06G0074200 Rhododendron simsii HOM05D004661 ORTHO05D005827 3.3e-23 111.7 71 67.6
Peaxi162Scf00281g00711 Petunia axillaris HOM05D004661 ORTHO05D005827 4.3e-23 111.3 70 68.6
arahy.Tifrunner.gnm1.ann1.438KDZ Arachis hypogaea HOM05D004661 ORTHO05D005827 9.7e-23 110.2 97 53.6
MD15G1381500 Malus domestica HOM05D004661 ORTHO05D005827 9.7e-23 110.2 74 64.9
Zm00001eb006570 Zea mays HOM05D004661 ORTHO05D005827 1.3e-22 109.8 101 58.4
HPP92_009251 Vanilla planifolia HOM05D004661 ORTHO05D005827 2.8e-22 108.6 95 57.9
TAR628G0590 Trochodendron aralioides HOM05D004661 ORTHO05D005827 1.8e-21 105.9 78 65.4
HanXRQChr02g0047021 Helianthus annuus HOM05D004661 ORTHO05D005827 3.1e-21 105.1 72 62.5
Mapoly0005s0266 Marchantia polymorpha HOM05D004661 ORTHO05D005827 9.1e-21 103.6 105 53.3
SMO361G0338 Selaginella moellendorffii HOM05D004661 ORTHO05D005827 1.1e-18 96.7 101 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1068 Anthoceros agrestis HOM05D004661 ORTHO05D005827 5.5e-18 94.4 71 54.9
HPP92_009332 Vanilla planifolia HOM05D004661 ORTHO05D005827 1.8e-16 89.4 75 60.0
Cre10.g425050 Chlamydomonas reinhardtii HOM05D004661 ORTHO05D005827 1.1e-07 60.1 90 37.8
MELO3C003537.2 Cucumis melo HOM05D004661 ORTHO05D005827 4.4e-07 58.2 32 78.1
Zm00001eb013140 Zea mays HOM05D002236 ORTHO05D002341 2.8e-06 55.5 38 55.3


User provided reference genes

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