Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0170 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 3.3e-237 824.7 434 100.0
CDE10G1291 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 2.7e-178 629.0 434 77.0
Nn7g36099 Nelumbo nucifera HOM05D004785 ORTHO05D005704 1.3e-145 520.4 444 66.7
MBI04_g14260_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 2.3e-145 519.6 437 64.8
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 1.5e-141 506.9 434 64.3
TAR633G2005 Trochodendron aralioides HOM05D004785 ORTHO05D005704 8.4e-140 501.1 445 64.3
Nn2g15504 Nelumbo nucifera HOM05D004785 ORTHO05D005704 3.2e-139 499.2 441 62.4
Aqoxy1G00294 Aquilegia oxysepala HOM05D004785 ORTHO05D005704 3.0e-137 492.7 437 62.7
GSVIVG01032056001 Vitis vinifera HOM05D004785 ORTHO05D005704 4.3e-136 488.8 445 63.1
Dinv43463 Davidia involucrata HOM05D004785 ORTHO05D005704 2.1e-135 486.5 463 59.8
Cc02_g27530 Coffea canephora HOM05D004785 ORTHO05D005704 2.8e-135 486.1 446 60.5
CiPaw.13G002800 Carya illinoinensis HOM05D004785 ORTHO05D005704 6.9e-134 481.5 449 59.9
Prupe.2G009600 Prunus persica HOM05D004785 ORTHO05D005704 6.9e-134 481.5 444 59.7
MBI01_g36433_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 9.0e-134 481.1 443 61.4
arahy.Tifrunner.gnm1.ann1.59DMFX Arachis hypogaea HOM05D004785 ORTHO05D005704 2.6e-133 479.6 448 60.5
QL04p005208 Quercus lobata HOM05D004785 ORTHO05D005704 9.9e-133 477.6 452 59.1
Thecc.01G414000 Theobroma cacao HOM05D004785 ORTHO05D005704 4.9e-132 475.3 447 58.8
RcHm_v2.0_Chr1g0314901 Rosa chinensis HOM05D004785 ORTHO05D005704 1.1e-131 474.2 444 58.8
arahy.Tifrunner.gnm1.ann1.M8XEBR Arachis hypogaea HOM05D004785 ORTHO05D005704 4.2e-131 472.2 448 60.3
Gohir.D08G037900 Gossypium hirsutum HOM05D004785 ORTHO05D005704 5.4e-131 471.9 443 59.8
Dinv09378 Davidia involucrata HOM05D004785 ORTHO05D005704 7.1e-131 471.5 490 55.7
Duzib138G0206 Durio zibethinus HOM05D004785 ORTHO05D005704 2.1e-130 469.9 451 60.1
Gorai.004G035900 Gossypium raimondii HOM05D004785 ORTHO05D005704 3.5e-130 469.2 448 59.2
FAN03G2451 Fragaria x ananassa HOM05D004785 ORTHO05D005704 1.8e-129 466.8 443 57.6
SalBow4G2313 Salvia bowleyana HOM05D004785 ORTHO05D005704 1.8e-129 466.8 438 58.9
Cpa.g.sc234.14 Carica papaya HOM05D004785 ORTHO05D005704 1.5e-128 463.8 474 56.3
FvH4_7g00680 Fragaria vesca HOM05D004785 ORTHO05D005704 1.5e-128 463.8 444 57.9
FAN06G5068 Fragaria x ananassa HOM05D004785 ORTHO05D005704 1.5e-128 463.8 444 57.9
CAN.G170.130 Capsicum annuum HOM05D004785 ORTHO05D005704 1.9e-128 463.4 447 57.7
CSS0030425 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 3.3e-128 462.6 444 61.7
CSS0016942 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 4.3e-128 462.2 444 61.7
Lalb_Chr01g0008111 Lupinus albus HOM05D004785 ORTHO05D005704 4.3e-128 462.2 446 58.3
FAN01G2822 Fragaria x ananassa HOM05D004785 ORTHO05D005704 5.6e-128 461.8 444 57.7
Lalb_Chr19g0132061 Lupinus albus HOM05D004785 ORTHO05D005704 5.6e-128 461.8 444 58.8
FAN10G3515 Fragaria x ananassa HOM05D004785 ORTHO05D005704 7.4e-128 461.5 444 57.7
MSTRG.20603 Avicennia marina HOM05D004785 ORTHO05D005704 9.6e-128 461.1 442 57.5
FAN01G2446 Fragaria x ananassa HOM05D004785 ORTHO05D005704 1.6e-127 460.3 444 57.4
THA.LOC104801982 Tarenaya hassleriana HOM05D004785 ORTHO05D005704 1.6e-127 460.3 455 58.5
Sed0027076 Sechium edule HOM05D004785 ORTHO05D005704 2.8e-127 459.5 451 57.6
Potri.001G269900 Populus trichocarpa HOM05D004785 ORTHO05D005704 6.2e-127 458.4 449 58.1
Sp5g10160 Schrenkiella parvula HOM05D004785 ORTHO05D005704 3.1e-126 456.1 455 56.7
Thhalv10010376m.g Eutrema salsugineum HOM05D004785 ORTHO05D005704 4.0e-126 455.7 452 57.1
Rhsim01G0130900 Rhododendron simsii HOM05D004785 ORTHO05D005704 5.3e-126 455.3 442 57.9
CANSAT11G0943 Cannabis sativa HOM05D004785 ORTHO05D005704 6.9e-126 454.9 444 59.5
Potri.009G064600 Populus trichocarpa HOM05D004785 ORTHO05D005704 2.6e-125 453.0 450 58.2
Hund03669 Selenicereus undatus HOM05D004785 ORTHO05D005704 4.5e-125 452.2 440 59.8
Migut.N01482 Erythranthe guttata HOM05D004785 ORTHO05D005704 5.8e-125 451.8 444 58.1
Glyma.08G152600 Glycine max HOM05D004785 ORTHO05D005704 5.8e-125 451.8 446 57.4
MELO3C023531.2 Cucumis melo HOM05D004785 ORTHO05D005704 2.2e-124 449.9 449 58.1
Psat4g149360 Pisum sativum HOM05D004785 ORTHO05D005704 2.2e-124 449.9 448 56.5
Manes.10G146300 Manihot esculenta HOM05D004785 ORTHO05D005704 4.9e-124 448.7 448 60.0
Solyc01g086890.3 Solanum lycopersicum HOM05D004785 ORTHO05D005704 8.4e-124 448.0 449 56.1
AT3G52120 Arabidopsis thaliana HOM05D004785 ORTHO05D005704 1.1e-123 447.6 449 56.6
Sopen01g033900 Solanum pennellii HOM05D004785 ORTHO05D005704 1.1e-123 447.6 449 56.6
CsaV3_7G031250 Cucumis sativus L. HOM05D004785 ORTHO05D005704 1.4e-123 447.2 451 58.3
TPR.G21739 Trifolium pratense HOM05D004785 ORTHO05D005704 1.9e-123 446.8 451 56.1
Eucgr.G03395 Eucalyptus grandis HOM05D004785 ORTHO05D005704 3.2e-123 446.0 441 59.9
PGSC0003DMG400025264 Solanum tuberosum HOM05D004785 ORTHO05D005704 3.2e-123 446.0 444 56.8
Glyma.15G272000 Glycine max HOM05D004785 ORTHO05D005704 4.2e-123 445.7 440 57.3
VMungo1080G1418 Vigna mungo HOM05D004785 ORTHO05D005704 5.5e-123 445.3 443 55.8
Phvul.005G036800 Phaseolus vulgaris HOM05D004785 ORTHO05D005704 9.3e-123 444.5 443 56.2
Carub.0005s1846 Capsella rubella HOM05D004785 ORTHO05D005704 1.2e-122 444.1 456 55.5
ECA246G0971 Erigeron canadensis HOM05D004785 ORTHO05D005704 1.2e-122 444.1 441 57.6
Gohir.A08G027150 Gossypium hirsutum HOM05D004785 ORTHO05D005704 1.2e-122 444.1 444 57.9
Hma1.2p1_0845F.1_g227490 Hydrangea macrophylla HOM05D004785 ORTHO05D005704 2.7e-122 443.0 449 57.7
Duzib268G1355 Durio zibethinus HOM05D004785 ORTHO05D005704 3.5e-122 442.6 440 55.7
Actinidia20681 Actinidia chinensis HOM05D004785 ORTHO05D005704 4.6e-122 442.2 451 59.0
TWI73G0859 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 1.8e-121 440.3 458 58.5
SalBow5G0866 Salvia bowleyana HOM05D004785 ORTHO05D005704 2.3e-121 439.9 438 56.6
SalBow5G5194 Salvia bowleyana HOM05D004785 ORTHO05D005704 2.3e-121 439.9 438 56.6
Lj3g0000927 Lotus japonicus HOM05D004785 ORTHO05D005704 3.9e-121 439.1 446 55.6
Nitab4.5_0006850g0010 Nicotiana tabacum HOM05D004785 ORTHO05D005704 6.7e-121 438.3 439 57.4
HanXRQChr15g0479141 Helianthus annuus HOM05D004785 ORTHO05D005704 1.1e-120 437.6 440 58.2
Lj3g0006296 Lotus japonicus HOM05D004785 ORTHO05D005704 1.1e-120 437.6 446 56.1
Ciclev10031609m.g Citrus clementina HOM05D004785 ORTHO05D005704 1.9e-120 436.8 446 59.4
Medtr8g036890 Medicago truncatula HOM05D004785 ORTHO05D005704 2.5e-120 436.4 449 55.9
TWI09G1360 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 2.5e-120 436.4 462 58.0
vmacro21177 Vaccinium macrocarpon HOM05D004785 ORTHO05D005704 5.7e-120 435.3 441 57.8
BolC8t50356H Brassica oleracea HOM05D004785 ORTHO05D005704 7.4e-120 434.9 459 56.0
PSO339G6673 Papaver somniferum HOM05D004785 ORTHO05D005704 7.4e-120 434.9 448 57.6
C08p27390 Brassica napus HOM05D004785 ORTHO05D005704 1.3e-119 434.1 459 55.8
A09p45180 Brassica napus HOM05D004785 ORTHO05D005704 1.6e-119 433.7 451 55.4
Sabra16G0165300 Salix brachista HOM05D004785 ORTHO05D005704 1.6e-119 433.7 463 56.8
BraA09t39981Z Brassica rapa HOM05D004785 ORTHO05D005704 2.8e-119 433.0 451 55.4
PSO384G1867 Papaver somniferum HOM05D004785 ORTHO05D005704 2.8e-119 433.0 449 57.2
Sabra09G0047800 Salix brachista HOM05D004785 ORTHO05D005704 2.8e-119 433.0 447 57.3
Aa31LG10G7210 Aethionema arabicum HOM05D004785 ORTHO05D005704 3.7e-119 432.6 496 52.6
Manes.07G003900 Manihot esculenta HOM05D004785 ORTHO05D005704 4.8e-119 432.2 448 57.8
AL5G32690 Arabidopsis lyrata HOM05D004785 ORTHO05D005704 1.1e-118 431.0 471 54.1
MD07G1006500 Malus domestica HOM05D004785 ORTHO05D005704 1.4e-118 430.6 493 51.9
Atru.chr11.2638 Acer truncatum HOM05D004785 ORTHO05D005704 3.1e-118 429.5 445 59.1
ATR0733G146 Amborella trichopoda HOM05D004785 ORTHO05D005704 2.0e-117 426.8 441 57.8
BcaNung06094 Brassica carinata HOM05D004785 ORTHO05D005704 2.6e-117 426.4 457 54.9
Sc15g0001680 Simmondsia chinensis HOM05D004785 ORTHO05D005704 5.8e-117 425.2 444 58.3
Hund07648 Selenicereus undatus HOM05D004785 ORTHO05D005704 1.3e-116 424.1 442 57.7
Lsat_1_v5_gn_4_68280 Lactuca sativa HOM05D004785 ORTHO05D005704 3.2e-115 419.5 431 58.7
Ca_23868_v3 Cicer arietinum L. HOM05D004785 ORTHO05D005704 7.1e-115 418.3 448 56.9
SGA_v2.0_scaffold95G28788 Striga asiatica HOM05D004785 ORTHO05D005704 8.7e-113 411.4 467 55.2
AUR62022266 Chenopodium quinoa HOM05D004785 ORTHO05D005704 1.5e-112 410.6 442 57.9
COL.COLO4_23900 Corchorus olitorius HOM05D004785 ORTHO05D005704 7.4e-112 408.3 441 56.0
HPP92_022791 Vanilla planifolia HOM05D004785 ORTHO05D005704 1.3e-111 407.5 447 55.7
unitig_61.g26449 Utricularia gibba HOM05D004785 ORTHO05D005704 4.1e-110 402.5 432 56.7
PGR044G1403 Punica granatum HOM05D004785 ORTHO05D005704 1.3e-108 397.5 443 55.5
CDE04G1996 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 5.0e-108 395.6 380 57.4
Actinidia21563 Actinidia chinensis HOM05D004785 ORTHO05D005704 1.6e-106 390.6 442 56.3
Peaxi162Scf00428g00096 Petunia axillaris HOM05D004785 ORTHO05D005704 3.6e-106 389.4 445 54.2
EL10Ac9g21166 Beta vulgaris HOM05D004785 ORTHO05D005704 1.4e-105 387.5 428 55.4
Mapoly0063s0041 Marchantia polymorpha HOM05D004785 ORTHO05D005704 3.1e-102 376.3 472 49.6
Lj7C568G16 Lonicera japonica HOM05D004785 ORTHO05D005704 9.1e-102 374.8 447 53.2
Nitab4.5_0001542g0040 Nicotiana tabacum HOM05D004785 ORTHO05D005704 9.1e-102 374.8 299 66.6
AUR62031974 Chenopodium quinoa HOM05D004785 ORTHO05D005704 1.0e-100 371.3 443 53.5
SEGI_00751 Sequoiadendron giganteum HOM05D004785 ORTHO05D005704 2.5e-99 366.7 438 52.3
unitig_0.g1380 Utricularia gibba HOM05D004785 ORTHO05D005704 2.4e-94 350.1 305 63.9
Zm00001eb325220 Zea mays HOM05D004785 ORTHO05D005704 3.1e-94 349.7 447 52.3
Sed0007108 Sechium edule HOM05D004785 ORTHO05D005704 2.7e-90 336.7 380 54.5
SMO358G0717 Selaginella moellendorffii HOM05D004785 ORTHO05D005704 3.0e-89 333.2 431 48.5
CBR_g19876 Chara braunii HOM05D004785 ORTHO05D005704 3.7e-87 326.2 500 43.4
Pp3c7_22470 Physcomitrium patens HOM05D004785 ORTHO05D005704 8.2e-87 325.1 475 44.8
DCAR_029653 Daucus carota HOM05D004785 ORTHO05D005704 9.4e-83 311.6 425 48.9
Oeu014580.2 Olea europaea HOM05D004785 ORTHO05D005704 4.0e-81 306.2 382 51.3
Eucgr.J01259 Eucalyptus grandis HOM05D004785 ORTHO05D005704 8.3e-79 298.5 377 52.5
CARHR161860 Cardamine hirsuta HOM05D004785 ORTHO05D005704 5.7e-64 249.2 169 73.4
MD02G1315400 Malus domestica HOM05D004785 ORTHO05D005704 7.0e-62 242.3 311 48.9
Medtr8g036260 Medicago truncatula HOM05D004785 ORTHO05D005704 1.4e-57 228.0 322 46.6
Eucgr.B02099 Eucalyptus grandis HOM05D004785 ORTHO05D005704 2.3e-57 227.3 137 80.3
Gohir.D08G166700 Gossypium hirsutum HOM05D004785 ORTHO05D005704 1.4e-54 218.0 443 40.6
SHI47607 Sapria himalayana HOM05D004785 ORTHO05D005704 9.2e-54 215.3 259 48.3
SHI47732 Sapria himalayana HOM05D004785 ORTHO05D005704 9.2e-54 215.3 259 48.3
Gorai.004G174100 Gossypium raimondii HOM05D004785 ORTHO05D005704 1.2e-53 214.9 443 40.6
AagrBONN_evm.TU.Sc2ySwM_228.206 Anthoceros agrestis HOM05D004785 ORTHO05D005704 5.0e-52 209.5 341 43.1
Haze_03237 Corylus avellana HOM05D004785 ORTHO05D005704 3.4e-48 196.8 210 54.3
Gohir.A08G145800 Gossypium hirsutum HOM05D004785 ORTHO05D005704 6.0e-45 186.0 356 40.4
TAR623G0847 Trochodendron aralioides HOM05D004785 ORTHO05D005704 1.2e-40 171.8 190 53.2
Pp3c11_4770 Physcomitrium patens HOM05D004785 ORTHO05D005704 1.7e-39 167.9 308 40.6
Cre16.g686000 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D005704 3.1e-33 147.1 129 57.4
Eucgr.A02263 Eucalyptus grandis HOM05D004785 ORTHO05D005704 2.0e-32 144.4 83 81.9
BolC4t25664H Brassica oleracea HOM05D004785 ORTHO05D005704 9.9e-32 142.1 120 58.3
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 2.2e-31 141.0 91 79.1
Medtr8g036255 Medicago truncatula HOM05D004785 ORTHO05D005704 9.3e-30 135.6 74 83.8
Pp3c11_4670 Physcomitrium patens HOM05D004785 ORTHO05D005704 4.6e-29 133.3 248 41.1
C04p40800 Brassica napus HOM05D004785 ORTHO05D005704 1.0e-28 132.1 145 48.3
ClCG09G004330 Citrullus lanatus HOM05D004785 ORTHO05D005704 1.0e-28 132.1 69 88.4
BcaC02g09278 Brassica carinata HOM05D004785 ORTHO05D005704 3.0e-28 130.6 144 47.9
DCAR_029646 Daucus carota HOM05D004785 ORTHO05D005704 1.1e-25 122.1 68 80.9
A04p07240 Brassica napus HOM05D004785 ORTHO05D005704 2.0e-24 117.9 117 54.7
BraA04t16419Z Brassica rapa HOM05D004785 ORTHO05D005704 5.8e-24 116.3 91 63.7
Oeu006578.1 Olea europaea HOM05D004785 ORTHO05D005704 2.2e-23 114.4 232 37.5
MCO15G372 Micromonas commoda HOM05D004785 ORTHO05D005704 2.9e-15 87.4 446 25.3
CARHR161850 Cardamine hirsuta HOM05D004785 ORTHO05D005704 1.0e-12 79.0 141 44.0
AagrBONN_evm.TU.Sc2ySwM_228.74 Anthoceros agrestis HOM05D004785 ORTHO05D005704 3.9e-12 77.0 62 61.3
unitig_0.g1381 Utricularia gibba HOM05D004785 ORTHO05D005704 1.9e-06 58.2 90 43.3
Cre02.g105287 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D008521 3.2e-06 57.4 56 46.4


User provided reference genes

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