Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1261 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 1.3e-95 353.2 203 100.0
CDE02G4410 Ceratophyllum demersum HOM05D001668 ORTHO05D005522 1.5e-46 190.3 182 62.6
Nn4g23126 Nelumbo nucifera HOM05D004667 ORTHO05D005522 4.1e-28 129.0 205 38.5
TAR629G0869 Trochodendron aralioides HOM05D000350 ORTHO05D005522 2.0e-27 126.7 211 37.0
PSO063G1198 Papaver somniferum HOM05D004667 ORTHO05D005522 2.6e-27 126.3 213 40.8
Nn3g17203 Nelumbo nucifera HOM05D004667 ORTHO05D005522 4.5e-27 125.6 205 39.0
GSVIVG01011386001 Vitis vinifera HOM05D004667 ORTHO05D005522 4.5e-27 125.6 200 35.5
TAR371G0790 Trochodendron aralioides HOM05D004667 ORTHO05D005522 7.6e-27 124.8 211 37.4
PSO832G1839 Papaver somniferum HOM05D004667 ORTHO05D005522 1.0e-26 124.4 212 39.2
Dinv19946 Davidia involucrata HOM05D004667 ORTHO05D005522 1.3e-26 124.0 190 38.4
Hma1.2p1_0449F.1_g155390 Hydrangea macrophylla HOM05D004667 ORTHO05D005522 1.7e-26 123.6 189 36.0
ATR0564G258 Amborella trichopoda HOM05D004667 ORTHO05D005522 2.9e-26 122.9 210 40.0
Aqoxy3G03350 Aquilegia oxysepala HOM05D004667 ORTHO05D005522 2.9e-26 122.9 226 36.7
MBI02_g23680_MAGBIO Magnolia biondii HOM05D004667 ORTHO05D005522 6.5e-26 121.7 217 36.4
Duzib084G1199 Durio zibethinus HOM05D004667 ORTHO05D005522 8.4e-26 121.3 213 36.6
Lj5C112T10 Lonicera japonica HOM05D004667 ORTHO05D005522 1.1e-25 120.9 201 35.3
Gohir.A11G030611 Gossypium hirsutum HOM05D004667 ORTHO05D005522 5.5e-25 118.6 211 36.0
QL10p016532 Quercus lobata HOM05D004667 ORTHO05D005522 5.5e-25 118.6 201 36.3
Thecc.03G084200 Theobroma cacao HOM05D004667 ORTHO05D005522 7.2e-25 118.2 213 35.7
Lalb_Chr07g0177971 Lupinus albus HOM05D004667 ORTHO05D005522 9.3e-25 117.9 202 34.7
Cpa.g.c30141.2 Carica papaya HOM05D004667 ORTHO05D005522 1.6e-24 117.1 199 34.2
Ciclev10021941m.g Citrus clementina HOM05D004667 ORTHO05D005522 1.6e-24 117.1 202 34.7
Duzib205G0185 Durio zibethinus HOM05D004667 ORTHO05D005522 1.6e-24 117.1 215 34.4
Gohir.D11G033900 Gossypium hirsutum HOM05D004667 ORTHO05D005522 1.6e-24 117.1 208 35.1
Hma1.2p1_0735F.1_g210470 Hydrangea macrophylla HOM05D004667 ORTHO05D005522 2.1e-24 116.7 190 35.8
Ca_21829_v3 Cicer arietinum L. HOM05D004667 ORTHO05D005522 3.5e-24 115.9 207 35.7
Dinv38692 Davidia involucrata HOM05D004667 ORTHO05D005522 3.5e-24 115.9 201 36.3
Gorai.007G036700 Gossypium raimondii HOM05D004667 ORTHO05D005522 4.6e-24 115.5 208 35.1
Actinidia17543 Actinidia chinensis HOM05D004667 ORTHO05D005522 7.9e-24 114.8 198 34.3
Lj4g0024645 Lotus japonicus HOM05D004667 ORTHO05D005522 7.9e-24 114.8 211 34.1
Lalb_Chr13g0303301 Lupinus albus HOM05D004667 ORTHO05D005522 3.0e-23 112.8 198 35.4
Manes.14G077100 Manihot esculenta HOM05D004667 ORTHO05D005522 3.0e-23 112.8 210 34.3
TPR.G34729 Trifolium pratense HOM05D004667 ORTHO05D005522 3.9e-23 112.5 201 33.8
Medtr4g108360 Medicago truncatula HOM05D004667 ORTHO05D005522 5.1e-23 112.1 197 35.0
Ah.08g216800 Amaranthus hybridus HOM05D004667 ORTHO05D005522 6.7e-23 111.7 202 36.1
Actinidia02716 Actinidia chinensis HOM05D004667 ORTHO05D005522 8.7e-23 111.3 196 34.2
Lsat_1_v5_gn_4_178121 Lactuca sativa HOM05D004667 ORTHO05D005522 8.7e-23 111.3 198 34.3
Rhsim08G0068600 Rhododendron simsii HOM05D004667 ORTHO05D005522 1.5e-22 110.5 203 34.5
Os07g0628500 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 1.9e-22 110.2 217 34.6
CsaV3_1G002260 Cucumis sativus L. HOM05D004667 ORTHO05D005522 2.5e-22 109.8 200 36.0
Migut.D01831 Erythranthe guttata HOM05D004667 ORTHO05D005522 3.3e-22 109.4 205 36.1
Psat4g051040 Pisum sativum HOM05D004667 ORTHO05D005522 3.3e-22 109.4 199 33.7
EL10Ac7g16410 Beta vulgaris HOM05D004667 ORTHO05D005522 4.3e-22 109.0 203 40.9
CSS0005857 Camellia sinensis var. sinensis HOM05D004667 ORTHO05D005522 4.3e-22 109.0 197 34.5
CANSAT80G1185 Cannabis sativa HOM05D004667 ORTHO05D005522 5.7e-22 108.6 199 37.2
MELO3C017166.2 Cucumis melo HOM05D004667 ORTHO05D005522 9.7e-22 107.8 200 35.0
Glyma.17G098900 Glycine max HOM05D004667 ORTHO05D005522 9.7e-22 107.8 201 34.3
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 9.7e-22 107.8 194 37.1
Cc07_g03280 Coffea canephora HOM05D004667 ORTHO05D005522 1.3e-21 107.5 209 30.6
ECA232G3869 Erigeron canadensis HOM05D004667 ORTHO05D005522 1.3e-21 107.5 195 31.8
arahy.Tifrunner.gnm1.ann1.0RV7R4 Arachis hypogaea HOM05D004667 ORTHO05D005522 1.6e-21 107.1 216 34.7
Eucgr.B00470 Eucalyptus grandis HOM05D004667 ORTHO05D005522 1.6e-21 107.1 193 34.7
Sed0021322 Sechium edule HOM05D004667 ORTHO05D005522 1.6e-21 107.1 192 37.5
MSTRG.4419 Avicennia marina HOM05D004667 ORTHO05D005522 2.2e-21 106.7 206 33.0
COL.COLO4_24543 Corchorus olitorius HOM05D004667 ORTHO05D005522 2.2e-21 106.7 205 34.1
Glyma.05G027600 Glycine max HOM05D004667 ORTHO05D005522 2.2e-21 106.7 198 33.3
Sabra03G0045100 Salix brachista HOM05D004667 ORTHO05D005522 3.7e-21 105.9 203 34.5
Potri.003G074400 Populus trichocarpa HOM05D004667 ORTHO05D005522 4.8e-21 105.5 197 33.0
AUR62009884 Chenopodium quinoa HOM05D004667 ORTHO05D005522 8.2e-21 104.8 201 31.8
ClCG06G016270 Citrullus lanatus HOM05D004667 ORTHO05D005522 8.2e-21 104.8 200 34.5
vmacro18196 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 8.2e-21 104.8 196 32.7
RcHm_v2.0_Chr7g0181001 Rosa chinensis HOM05D004667 ORTHO05D005522 1.1e-20 104.4 200 34.0
AUR62001482 Chenopodium quinoa HOM05D004667 ORTHO05D005522 1.4e-20 104.0 203 31.5
FAN08G0134 Fragaria x ananassa HOM05D004667 ORTHO05D005522 1.4e-20 104.0 196 34.7
Phvul.003G191000 Phaseolus vulgaris HOM05D004667 ORTHO05D005522 1.8e-20 103.6 207 34.3
Sc04g0002550 Simmondsia chinensis HOM05D004667 ORTHO05D005522 1.8e-20 103.6 192 33.3
arahy.Tifrunner.gnm1.ann1.U816VA Arachis hypogaea HOM05D004667 ORTHO05D005522 2.4e-20 103.2 216 35.6
Potri.015G142700 Populus trichocarpa HOM05D004667 ORTHO05D005522 2.4e-20 103.2 205 32.7
PGR083G2477 Punica granatum HOM05D004667 ORTHO05D005522 2.4e-20 103.2 189 31.7
Sed0008118 Sechium edule HOM05D004667 ORTHO05D005522 2.4e-20 103.2 197 35.0
Actinidia04904 Actinidia chinensis HOM05D004667 ORTHO05D005522 3.1e-20 102.8 201 33.3
HanXRQChr05g0158091 Helianthus annuus HOM05D004667 ORTHO05D005522 4.1e-20 102.4 196 32.7
CDE05G2553 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 5.3e-20 102.1 213 31.9
ECA246G3018 Erigeron canadensis HOM05D004667 ORTHO05D005522 9.0e-20 101.3 194 32.5
Migut.H00911 Erythranthe guttata HOM05D004667 ORTHO05D005522 1.2e-19 100.9 222 29.7
VMungo1215G1912 Vigna mungo HOM05D004667 ORTHO05D005522 1.2e-19 100.9 207 32.9
SalBow1G0094 Salvia bowleyana HOM05D004667 ORTHO05D005522 1.5e-19 100.5 193 33.2
TWI15G0884 Tripterygium wilfordii HOM05D004667 ORTHO05D005522 1.5e-19 100.5 203 33.5
TWI60G0935 Tripterygium wilfordii HOM05D004667 ORTHO05D005522 1.5e-19 100.5 205 36.1
Prupe.5G190100 Prunus persica HOM05D004667 ORTHO05D005522 2.0e-19 100.1 202 33.2
Nitab4.5_0000741g0010 Nicotiana tabacum HOM05D004667 ORTHO05D005522 3.4e-19 99.4 204 30.9
CiPaw.11G042700 Carya illinoinensis HOM05D004667 ORTHO05D005522 4.5e-19 99.0 202 42.6
MD06G1191600 Malus domestica HOM05D004667 ORTHO05D005522 4.5e-19 99.0 201 32.8
Peaxi162Scf00712g00029 Petunia axillaris HOM05D004667 ORTHO05D005522 4.5e-19 99.0 190 33.7
MSTRG.3233 Avicennia marina HOM05D004667 ORTHO05D005522 5.9e-19 98.6 199 31.2
FvH4_5g15171 Fragaria vesca HOM05D004667 ORTHO05D005522 5.9e-19 98.6 196 34.2
Rhsim08G0156600 Rhododendron simsii HOM05D004667 ORTHO05D005522 7.7e-19 98.2 195 34.4
CDE05G0260 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 1.0e-18 97.8 212 31.1
Nitab4.5_0000026g0120 Nicotiana tabacum HOM05D004667 ORTHO05D005522 1.0e-18 97.8 209 31.1
VMungo1309G0024 Vigna mungo HOM05D004667 ORTHO05D005522 1.7e-18 97.1 206 34.5
Cc04_g16930 Coffea canephora HOM05D004667 ORTHO05D005522 2.9e-18 96.3 211 42.2
Oeu022621.1 Olea europaea HOM05D004667 ORTHO05D005522 3.8e-18 95.9 186 34.9
Duzib068G0725 Durio zibethinus HOM05D004667 ORTHO05D005522 6.5e-18 95.1 213 35.2
MD14G1198000 Malus domestica HOM05D004667 ORTHO05D005522 1.4e-17 94.0 200 32.0
Os11g0601700 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 1.4e-17 94.0 168 36.3
HanXRQChr09g0265291 Helianthus annuus HOM05D004667 ORTHO05D005522 2.5e-17 93.2 193 31.6
Zm00001eb018460 Zea mays HOM05D004667 ORTHO05D005522 2.5e-17 93.2 223 34.1
Manes.06G094100 Manihot esculenta HOM05D004667 ORTHO05D005522 3.2e-17 92.8 205 32.2
Peaxi162Scf00274g00834 Petunia axillaris HOM05D004667 ORTHO05D005522 3.2e-17 92.8 214 39.3
Phvul.009G188251 Phaseolus vulgaris HOM05D004667 ORTHO05D005522 3.2e-17 92.8 211 30.3
Atru.chr9.2269 Acer truncatum HOM05D004667 ORTHO05D005522 9.4e-17 91.3 200 40.0
Cfa018960 Carpinus fangiana HOM05D004667 ORTHO05D005522 9.4e-17 91.3 200 35.0
Hund02659 Selenicereus undatus HOM05D004667 ORTHO05D005522 1.6e-16 90.5 232 29.3
DCAR_011136 Daucus carota HOM05D004667 ORTHO05D005522 2.1e-16 90.1 201 28.4
Nitab4.5_0002257g0120 Nicotiana tabacum HOM05D004667 ORTHO05D005522 2.7e-16 89.7 223 36.3
MSTRG.23944 Avicennia marina HOM05D004667 ORTHO05D005522 3.6e-16 89.4 205 28.8
SGA_v2.0_scaffold59G20685 Striga asiatica HOM05D004667 ORTHO05D005522 3.6e-16 89.4 183 29.0
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 1.4e-15 87.4 200 37.0
Solyc03g116340.3 Solanum lycopersicum HOM05D004667 ORTHO05D005522 1.8e-15 87.0 214 37.4
Actinidia37637 Actinidia chinensis HOM05D004667 ORTHO05D005522 3.0e-15 86.3 154 33.8
Sopen03g035270 Solanum pennellii HOM05D004667 ORTHO05D005522 3.0e-15 86.3 214 37.4
PGSC0003DMG400000599 Solanum tuberosum HOM05D004667 ORTHO05D005522 3.0e-15 86.3 208 38.5
Lsat_1_v5_gn_5_19381 Lactuca sativa HOM05D000189 ORTHO05D000474 3.9e-15 85.9 173 34.1
Nitab4.5_0014986g0010 Nicotiana tabacum HOM05D004667 ORTHO05D005522 3.9e-15 85.9 206 38.8
THA.LOC104818253 Tarenaya hassleriana HOM05D004667 ORTHO05D005522 3.9e-15 85.9 202 41.1
Aa31LG4G16380 Aethionema arabicum HOM05D004667 ORTHO05D005522 6.7e-15 85.1 195 37.4
AT3G47640 Arabidopsis thaliana HOM05D004667 ORTHO05D005522 3.3e-14 82.8 209 38.3
BraA06t25665Z Brassica rapa HOM05D004667 ORTHO05D005522 4.3e-14 82.4 206 39.8
BolC1t03209H Brassica oleracea HOM05D004667 ORTHO05D005522 5.7e-14 82.0 214 38.3
vmacro17553 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 5.7e-14 82.0 158 34.8
A01p25820 Brassica napus HOM05D004667 ORTHO05D005522 7.4e-14 81.6 214 35.0
Os03g0379300 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 2.2e-13 80.1 230 31.7
AL5G26930 Arabidopsis lyrata HOM05D004667 ORTHO05D005522 2.8e-13 79.7 210 33.8
A06p27240 Brassica napus HOM05D004667 ORTHO05D005522 2.8e-13 79.7 206 38.8
BcaC01g02286 Brassica carinata HOM05D004667 ORTHO05D005522 3.7e-13 79.3 211 38.9
BraA01t02497Z Brassica rapa HOM05D004667 ORTHO05D005522 3.7e-13 79.3 214 35.0
CARHR156320 Cardamine hirsuta HOM05D004667 ORTHO05D005522 3.7e-13 79.3 209 38.8
Sp5g14280 Schrenkiella parvula HOM05D004667 ORTHO05D005522 6.3e-13 78.6 211 34.6
BcaB02g10693 Brassica carinata HOM05D004667 ORTHO05D005522 8.2e-13 78.2 206 38.8
Sabra15G0152700 Salix brachista HOM05D004667 ORTHO05D005522 8.2e-13 78.2 115 40.0
GSVIVG01008025001 Vitis vinifera HOM05D004667 ORTHO05D005522 1.4e-12 77.4 116 38.8
C03p67020 Brassica napus HOM05D004667 ORTHO05D005522 2.4e-12 76.6 206 39.3
BolC3t18977H Brassica oleracea HOM05D004667 ORTHO05D005522 3.1e-12 76.3 206 39.3
DCAR_021526 Daucus carota HOM05D004667 ORTHO05D005522 5.3e-12 75.5 191 38.7
Carub.0005s1377 Capsella rubella HOM05D004667 ORTHO05D005522 6.9e-12 75.1 212 36.8
Thhalv10010670m.g Eutrema salsugineum HOM05D004667 ORTHO05D005522 6.9e-12 75.1 209 37.8
BcaB05g23064 Brassica carinata HOM05D004667 ORTHO05D005522 1.2e-11 74.3 228 36.4
Zm00001eb328250 Zea mays HOM05D004667 ORTHO05D005522 1.5e-11 73.9 198 27.3
Oeu021379.1 Olea europaea HOM05D004667 ORTHO05D005522 4.5e-11 72.4 181 30.4
C01p32730 Brassica napus HOM05D004667 ORTHO05D005522 1.3e-10 70.9 130 43.1
CAN.G407.116 Capsicum annuum HOM05D004667 ORTHO05D005522 1.3e-10 70.9 202 35.1
vmacro18198 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 6.5e-10 68.6 152 29.6
Oeu016168.2 Olea europaea HOM05D004667 ORTHO05D005522 2.5e-09 66.6 235 23.4
SalBow3G3562 Salvia bowleyana HOM05D003097 ORTHO05D003437 7.9e-08 61.6 64 45.3
Ca_12533_v3 Cicer arietinum L. HOM05D000822 ORTHO05D002021 1.0e-07 61.2 77 39.0
Sabra09G0099100 Salix brachista HOM05D003097 ORTHO05D003437 1.4e-07 60.8 65 41.5
BcaC09g49811 Brassica carinata HOM05D004667 ORTHO05D005522 1.8e-07 60.5 173 35.3
Phvul.003G016700 Phaseolus vulgaris HOM05D003097 ORTHO05D003437 2.3e-07 60.1 70 42.9
Potri.009G129600 Populus trichocarpa HOM05D003097 ORTHO05D003437 2.3e-07 60.1 65 41.5
Sed0015691 Sechium edule HOM05D003097 ORTHO05D003437 3.9e-07 59.3 65 43.1
TAR628G1174 Trochodendron aralioides HOM05D003097 ORTHO05D003437 3.9e-07 59.3 64 43.8
ClCG02G011390 Citrullus lanatus HOM05D003097 ORTHO05D003437 5.1e-07 58.9 64 40.6
Gorai.005G252200 Gossypium raimondii HOM05D003097 ORTHO05D003437 5.1e-07 58.9 166 30.1
FAN27G3375 Fragaria x ananassa HOM05D003097 ORTHO05D003437 6.7e-07 58.5 59 47.5
Gohir.A03G203100 Gossypium hirsutum HOM05D003097 ORTHO05D003437 6.7e-07 58.5 165 40.6
Gohir.D02G224400 Gossypium hirsutum HOM05D003097 ORTHO05D003437 6.7e-07 58.5 165 40.6
Medtr1g032600 Medicago truncatula HOM05D003097 ORTHO05D003437 6.7e-07 58.5 61 44.3
TWI75G0491 Tripterygium wilfordii HOM05D003097 ORTHO05D003437 6.7e-07 58.5 62 41.9
Glyma.07G171600 Glycine max HOM05D003097 ORTHO05D003437 8.8e-07 58.2 63 44.4
MSTRG.27673 Avicennia marina HOM05D003097 ORTHO05D003437 1.1e-06 57.8 62 40.3
Dinv33630 Davidia involucrata HOM05D003097 ORTHO05D003437 1.1e-06 57.8 65 41.5
FvH4_2g02000 Fragaria vesca HOM05D003097 ORTHO05D003437 1.5e-06 57.4 59 45.8
FAN24G0689 Fragaria x ananassa HOM05D003097 ORTHO05D003437 1.5e-06 57.4 59 45.8
QL11p047530 Quercus lobata HOM05D003097 ORTHO05D003437 1.5e-06 57.4 74 37.8
FAN23G2650 Fragaria x ananassa HOM05D003097 ORTHO05D003437 2.0e-06 57.0 178 34.3
Gohir.A11G175100 Gossypium hirsutum HOM05D003097 ORTHO05D003437 2.0e-06 57.0 62 43.5
Sed0015022 Sechium edule HOM05D003097 ORTHO05D003437 2.0e-06 57.0 75 37.3
MD05G1115800 Malus domestica HOM05D003097 ORTHO05D003437 3.3e-06 56.2 60 41.7
Cpa.g.sc6.255 Carica papaya HOM05D003097 ORTHO05D003437 4.4e-06 55.8 56 46.4
Cfa005183 Carpinus fangiana HOM05D003097 ORTHO05D003437 4.4e-06 55.8 64 40.6
DCAR_022957 Daucus carota HOM05D003097 ORTHO05D003437 4.4e-06 55.8 62 40.3
GSVIVG01018777001 Vitis vinifera HOM05D003097 ORTHO05D003437 4.4e-06 55.8 60 43.3
COL.COLO4_21904 Corchorus olitorius HOM05D003097 ORTHO05D003437 5.7e-06 55.5 57 43.9
Duzib248G0851 Durio zibethinus HOM05D003097 ORTHO05D003437 5.7e-06 55.5 63 39.7
Gohir.D03G009200 Gossypium hirsutum HOM05D003097 ORTHO05D003437 5.7e-06 55.5 60 45.0
BcaNung03019 Brassica carinata HOM05D003097 ORTHO05D003437 7.4e-06 55.1 61 37.7
Lsat_1_v5_gn_4_144860 Lactuca sativa HOM05D003097 ORTHO05D003437 7.4e-06 55.1 58 39.7
Prupe.8G160700 Prunus persica HOM05D003097 ORTHO05D003437 7.4e-06 55.1 56 44.6
RcHm_v2.0_Chr6g0245181 Rosa chinensis HOM05D003097 ORTHO05D003437 7.4e-06 55.1 57 47.4
Phvul.011G178100 Phaseolus vulgaris HOM05D003097 ORTHO05D003437 9.7e-06 54.7 63 39.7
Sc03g0003590 Simmondsia chinensis HOM05D003097 ORTHO05D003437 9.7e-06 54.7 60 41.7


User provided reference genes

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