Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 0.0e+00 1090.1 529 100.0
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 3.8e-227 791.6 523 72.5
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 4.8e-222 774.6 523 71.5
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 1.1e-221 773.5 521 70.8
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 3.1e-221 771.9 523 69.2
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 4.1e-221 771.5 523 70.6
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 5.3e-221 771.2 523 70.0
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 4.5e-220 768.1 523 70.9
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 1.0e-219 766.9 523 70.0
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 6.5e-219 764.2 522 69.9
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 8.5e-219 763.8 525 69.1
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 3.2e-218 761.9 523 69.6
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 4.2e-218 761.5 523 68.6
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 4.2e-218 761.5 523 70.6
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 5.5e-218 761.1 523 69.4
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 2.1e-217 759.2 522 69.0
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 3.6e-217 758.4 533 68.3
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 4.6e-217 758.1 522 69.3
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 4.6e-217 758.1 522 69.0
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 6.1e-217 757.7 522 69.2
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 3.0e-216 755.4 527 67.7
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 3.0e-216 755.4 523 69.0
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 5.1e-216 754.6 523 69.2
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 6.7e-216 754.2 528 68.9
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 1.1e-215 753.4 521 69.5
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 1.5e-215 753.1 522 68.8
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 1.9e-215 752.7 522 68.8
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 2.5e-215 752.3 523 67.9
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 2.5e-215 752.3 523 68.5
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 2.5e-215 752.3 527 68.3
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 3.3e-215 751.9 525 68.8
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 4.3e-215 751.5 523 68.3
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 5.7e-215 751.1 522 68.8
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 1.3e-214 750.0 525 68.0
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 1.6e-214 749.6 521 68.7
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 2.2e-214 749.2 521 67.9
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 2.2e-214 749.2 523 68.8
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 2.8e-214 748.8 523 68.3
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 3.7e-214 748.4 535 67.7
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 3.7e-214 748.4 522 69.7
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 1.8e-213 746.1 523 68.3
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 3.1e-213 745.3 522 68.2
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 9.1e-213 743.8 527 67.4
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 3.4e-212 741.9 520 68.5
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 3.4e-212 741.9 521 69.1
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 1.3e-211 740.0 538 66.7
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 3.8e-211 738.4 522 67.6
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 3.8e-211 738.4 523 67.5
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 3.8e-211 738.4 523 67.3
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 6.5e-211 737.6 523 67.1
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 1.9e-210 736.1 523 68.5
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 2.5e-210 735.7 522 68.6
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 3.2e-210 735.3 522 67.4
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 4.2e-210 734.9 523 67.3
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 9.4e-210 733.8 523 66.7
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 9.4e-210 733.8 551 65.7
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 1.2e-209 733.4 523 67.1
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 1.6e-209 733.0 523 67.1
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 1.6e-209 733.0 529 65.8
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 6.1e-209 731.1 523 68.6
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 1.0e-208 730.3 523 66.7
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 1.0e-208 730.3 523 66.9
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 1.4e-208 729.9 523 67.1
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 1.4e-208 729.9 524 67.0
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 2.3e-208 729.2 523 66.5
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 3.9e-208 728.4 538 65.2
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 6.7e-208 727.6 522 67.0
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 1.1e-207 726.9 523 67.3
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 1.1e-207 726.9 539 65.9
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 1.5e-207 726.5 524 65.3
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 3.3e-207 725.3 522 67.4
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 9.7e-207 723.8 523 65.4
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 1.4e-205 719.9 523 65.2
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 1.8e-205 719.5 526 66.0
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 5.3e-205 718.0 523 65.4
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 9.1e-205 717.2 523 65.0
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 1.5e-204 716.5 524 65.3
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 2.0e-204 716.1 526 65.4
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 2.0e-204 716.1 542 65.9
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 7.7e-204 714.1 532 64.5
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 7.7e-204 714.1 523 64.8
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 1.3e-203 713.4 523 64.4
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 1.7e-203 713.0 523 64.8
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 2.2e-203 712.6 523 64.6
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 5.0e-203 711.4 535 65.8
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 8.5e-203 710.7 524 64.3
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 8.5e-203 710.7 523 64.2
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 2.5e-202 709.1 523 64.8
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 3.2e-202 708.8 523 64.1
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 1.4e-200 703.4 525 64.0
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 1.1e-194 683.7 491 66.2
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 1.2e-193 680.2 525 63.6
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 8.2e-190 667.5 463 68.5
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 6.5e-187 657.9 567 57.7
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 1.5e-186 656.8 521 59.7
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 5.9e-180 634.8 529 61.1
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 8.3e-174 614.4 523 56.4
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 1.0e-171 607.4 530 58.3
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 2.9e-171 605.9 518 56.9
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-170 601.3 513 54.4
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 3.8e-134 482.6 523 49.3
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 3.5e-108 396.4 637 35.9
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 3.9e-99 366.3 529 42.2
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 1.1e-93 348.2 265 63.8
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 5.9e-79 299.3 297 55.9
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 1.0e-70 271.9 237 59.5
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 5.7e-66 256.1 270 52.2
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 1.7e-46 191.4 122 71.3
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 3.3e-45 187.2 122 70.5
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 4.7e-44 183.3 127 65.4
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 1.4e-43 181.8 134 61.9
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 1.6e-31 141.7 138 47.1
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 2.8e-28 131.0 112 47.3
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 1.9e-24 118.2 146 44.5
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 7.8e-23 112.8 160 42.5
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 1.9e-16 91.7 62 67.7
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 1.9e-16 91.7 58 74.1
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 9.3e-16 89.4 110 48.2
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.9e-13 81.6 60 56.7
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 4.5e-10 70.5 43 69.8
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 6.4e-09 66.6 47 68.1
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 4.2e-08 63.9 44 68.2


User provided reference genes

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