Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0914 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 2.8e-70 268.5 135 100.0
CDE02G3949 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 1.7e-54 216.1 122 89.3
MBI14_g02860_MAGBIO Magnolia biondii HOM05D004715 ORTHO05D005644 1.5e-39 166.4 112 70.5
Nn7g35903 Nelumbo nucifera HOM05D004715 ORTHO05D005644 1.1e-37 160.2 118 65.3
Os05g0453900 Oryza sativa ssp. japonica HOM05D004715 ORTHO05D005644 5.4e-37 157.9 120 59.2
Aqoxy1G00791 Aquilegia oxysepala HOM05D004715 ORTHO05D005644 7.1e-37 157.5 118 61.9
Zm00001eb065860 Zea mays HOM05D004715 ORTHO05D005644 7.1e-37 157.5 111 62.2
TAR369G0040 Trochodendron aralioides HOM05D004715 ORTHO05D005644 9.2e-37 157.1 118 64.4
HPP92_025406 Vanilla planifolia HOM05D004715 ORTHO05D005644 2.7e-36 155.6 121 58.7
GSVIVG01017274001 Vitis vinifera HOM05D004715 ORTHO05D005644 7.8e-36 154.1 118 62.7
ATR0210G050 Amborella trichopoda HOM05D004715 ORTHO05D005644 1.7e-35 152.9 112 64.3
SEGI_27675 Sequoiadendron giganteum HOM05D004715 ORTHO05D005644 1.5e-34 149.8 110 60.0
Eucgr.F02544 Eucalyptus grandis HOM05D004715 ORTHO05D005644 9.6e-34 147.1 123 56.1
PSO384G1744 Papaver somniferum HOM05D004715 ORTHO05D005644 1.2e-33 146.7 119 59.7
PSO339G1448 Papaver somniferum HOM05D004715 ORTHO05D005644 1.6e-33 146.4 119 59.7
QL05p027948 Quercus lobata HOM05D004715 ORTHO05D005644 2.8e-33 145.6 118 58.5
CiPaw.01G245000 Carya illinoinensis HOM05D004715 ORTHO05D005644 3.1e-32 142.1 118 58.5
PGR102G1320 Punica granatum HOM05D004715 ORTHO05D005644 4.0e-32 141.7 122 54.1
Cfa001997 Carpinus fangiana HOM05D004715 ORTHO05D005644 8.9e-32 140.6 118 57.6
AUR62000794 Chenopodium quinoa HOM05D004715 ORTHO05D005644 1.2e-31 140.2 123 56.9
Oeu052278.1 Olea europaea HOM05D004715 ORTHO05D005644 2.0e-31 139.4 118 58.5
EL10Ac4g09393 Beta vulgaris HOM05D004715 ORTHO05D005644 2.6e-31 139.0 123 56.9
Lj5A69G39 Lonicera japonica HOM05D004715 ORTHO05D005644 9.9e-31 137.1 118 55.9
arahy.Tifrunner.gnm1.ann1.EP2671 Arachis hypogaea HOM05D004715 ORTHO05D005644 1.3e-30 136.7 107 58.9
RcHm_v2.0_Chr2g0123461 Rosa chinensis HOM05D004715 ORTHO05D005644 1.3e-30 136.7 120 55.0
RcHm_v2.0_Chr2g0136471 Rosa chinensis HOM05D004715 ORTHO05D005644 2.9e-30 135.6 120 54.2
Sc14g0006620 Simmondsia chinensis HOM05D004715 ORTHO05D005644 2.9e-30 135.6 112 58.0
arahy.Tifrunner.gnm1.ann1.GHMT6A Arachis hypogaea HOM05D004715 ORTHO05D005644 6.4e-30 134.4 107 57.9
SGA_v2.0_scaffold5G02664 Striga asiatica HOM05D004715 ORTHO05D005644 8.4e-30 134.0 118 52.5
Oeu063807.1 Olea europaea HOM05D004715 ORTHO05D005644 1.1e-29 133.7 118 54.2
FvH4_1g25440 Fragaria vesca HOM05D004715 ORTHO05D005644 1.9e-29 132.9 120 53.3
Medtr1g052500 Medicago truncatula HOM05D004715 ORTHO05D005644 1.9e-29 132.9 120 55.0
Medtr3g005080 Medicago truncatula HOM05D004715 ORTHO05D005644 2.4e-29 132.5 120 54.2
TWI18G0840 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 2.4e-29 132.5 108 56.5
Ca_12943_v3 Cicer arietinum L. HOM05D004715 ORTHO05D005644 3.2e-29 132.1 120 54.2
ClCG09G002750 Citrullus lanatus HOM05D004715 ORTHO05D005644 3.2e-29 132.1 121 57.9
Prupe.3G081400 Prunus persica HOM05D004715 ORTHO05D005644 3.2e-29 132.1 123 53.7
Hund21699 Selenicereus undatus HOM05D004715 ORTHO05D005644 4.2e-29 131.7 112 58.0
FAN23G0015 Fragaria x ananassa HOM05D004715 ORTHO05D005644 5.4e-29 131.3 120 51.7
Nitab4.5_0006709g0030 Nicotiana tabacum HOM05D004715 ORTHO05D005644 5.4e-29 131.3 122 51.6
Solyc09g008630.3 Solanum lycopersicum HOM05D004715 ORTHO05D005644 5.4e-29 131.3 123 49.6
AagrBONN_evm.TU.Sc2ySwM_368.872 Anthoceros agrestis HOM05D004715 ORTHO05D005644 7.1e-29 131.0 110 52.7
CAN.G1830.13 Capsicum annuum HOM05D004715 ORTHO05D005644 7.1e-29 131.0 123 49.6
CsaV3_7G032580 Cucumis sativus L. HOM05D004715 ORTHO05D005644 7.1e-29 131.0 121 57.0
DCAR_025488 Daucus carota HOM05D004715 ORTHO05D005644 7.1e-29 131.0 118 52.5
Lsat_1_v5_gn_5_132400 Lactuca sativa HOM05D004715 ORTHO05D005644 7.1e-29 131.0 118 50.8
Phvul.005G004200 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 7.1e-29 131.0 120 52.5
Sopen09g003430 Solanum pennellii HOM05D004715 ORTHO05D005644 9.3e-29 130.6 123 48.8
PGSC0003DMG403012981 Solanum tuberosum HOM05D004715 ORTHO05D005644 9.3e-29 130.6 123 49.6
Lalb_Chr22g0350991 Lupinus albus HOM05D004715 ORTHO05D005644 1.2e-28 130.2 120 51.7
Dinv30576 Davidia involucrata HOM05D004715 ORTHO05D005644 1.6e-28 129.8 118 54.2
Sed0013432 Sechium edule HOM05D004715 ORTHO05D005644 2.1e-28 129.4 120 56.7
TPR.G25532 Trifolium pratense HOM05D004715 ORTHO05D005644 2.1e-28 129.4 120 53.3
Atru.chr1.3057 Acer truncatum HOM05D004715 ORTHO05D005644 2.7e-28 129.0 122 54.1
Migut.I00797 Erythranthe guttata HOM05D004715 ORTHO05D005644 2.7e-28 129.0 122 50.8
Cc04_g04100 Coffea canephora HOM05D004715 ORTHO05D005644 4.6e-28 128.3 113 54.0
Hma1.2p1_0317F.1_g123670 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 4.6e-28 128.3 118 53.4
Hma1.2p1_1398F.1_g280822 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 4.6e-28 128.3 118 53.4
Pp3c20_16980 Physcomitrium patens HOM05D004715 ORTHO05D005644 4.6e-28 128.3 119 50.4
Pp3c20_17250 Physcomitrium patens HOM05D004715 ORTHO05D005644 4.6e-28 128.3 119 50.4
AUR62005173 Chenopodium quinoa HOM05D004715 ORTHO05D005644 6.0e-28 127.9 112 55.4
Lj3g0005798 Lotus japonicus HOM05D004715 ORTHO05D005644 6.0e-28 127.9 120 55.0
Potri.006G142300 Populus trichocarpa HOM05D004715 ORTHO05D005644 6.0e-28 127.9 122 53.3
SalBow2G3045 Salvia bowleyana HOM05D004715 ORTHO05D005644 6.0e-28 127.9 113 51.3
MELO3C023404.2 Cucumis melo HOM05D004715 ORTHO05D005644 1.0e-27 127.1 121 55.4
Phvul.005G019100 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 1.0e-27 127.1 120 52.5
MSTRG.11119 Avicennia marina HOM05D004715 ORTHO05D005644 1.3e-27 126.7 122 49.2
Hma1.2p1_1398F.1_g280805 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 1.3e-27 126.7 118 52.5
Manes.11G053500 Manihot esculenta HOM05D004715 ORTHO05D005644 1.7e-27 126.3 122 50.8
CSS0021095 Camellia sinensis var. sinensis HOM05D004715 ORTHO05D005644 2.3e-27 125.9 118 51.7
Glyma.04G133700 Glycine max HOM05D004715 ORTHO05D005644 3.9e-27 125.2 120 50.8
Ciclev10026407m.g Citrus clementina HOM05D004715 ORTHO05D005644 5.1e-27 124.8 122 51.6
Gohir.A10G076000 Gossypium hirsutum HOM05D004715 ORTHO05D005644 5.1e-27 124.8 112 53.6
VMungo0331G0566 Vigna mungo HOM05D004715 ORTHO05D005644 5.1e-27 124.8 119 50.4
FAN19G1260 Fragaria x ananassa HOM05D000191 ORTHO05D005644 6.6e-27 124.4 115 52.2
TWI12G0849 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 6.6e-27 124.4 103 52.4
Gohir.D10G075500 Gossypium hirsutum HOM05D004715 ORTHO05D005644 8.7e-27 124.0 121 49.6
Gorai.011G081500 Gossypium raimondii HOM05D004715 ORTHO05D005644 8.7e-27 124.0 121 49.6
SMO347G0348 Selaginella moellendorffii HOM05D004715 ORTHO05D005644 8.7e-27 124.0 103 50.5
FAN28G2078 Fragaria x ananassa HOM05D004715 ORTHO05D005644 1.1e-26 123.6 115 51.3
Thecc.06G070800 Theobroma cacao HOM05D004715 ORTHO05D005644 1.1e-26 123.6 125 49.6
Nitab4.5_0004281g0110 Nicotiana tabacum HOM05D004715 ORTHO05D005644 1.9e-26 122.9 113 50.4
FAN26G3166 Fragaria x ananassa HOM05D004715 ORTHO05D005644 2.5e-26 122.5 115 50.4
MD17G1206800 Malus domestica HOM05D004715 ORTHO05D005644 2.5e-26 122.5 109 54.1
CARHR074290 Cardamine hirsuta HOM05D004715 ORTHO05D005644 3.3e-26 122.1 122 50.0
Gohir.A05G125400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 3.3e-26 122.1 125 48.8
Gorai.009G130400 Gossypium raimondii HOM05D004715 ORTHO05D005644 3.3e-26 122.1 125 48.8
CANSAT56G4056 Cannabis sativa HOM05D004715 ORTHO05D005644 4.3e-26 121.7 110 51.8
Peaxi162Scf00125g00003 Petunia axillaris HOM05D004715 ORTHO05D005644 4.3e-26 121.7 132 47.0
Rhsim08G0215800 Rhododendron simsii HOM05D004715 ORTHO05D005644 7.3e-26 120.9 118 50.0
Rhsim03G0103800 Rhododendron simsii HOM05D004715 ORTHO05D005644 9.6e-26 120.6 109 52.3
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 1.3e-25 120.2 115 51.3
Atru.BG.159.p Acer truncatum HOM05D004715 ORTHO05D005644 1.6e-25 119.8 117 53.0
Gohir.D05G126400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 2.1e-25 119.4 125 48.0
AT1G80190 Arabidopsis thaliana HOM05D004715 ORTHO05D005644 3.6e-25 118.6 122 49.2
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 3.6e-25 118.6 126 46.8
Aa31LG1G19480 Aethionema arabicum HOM05D004715 ORTHO05D005644 4.8e-25 118.2 122 49.2
C02p37490 Brassica napus HOM05D004715 ORTHO05D005644 4.8e-25 118.2 119 47.9
unitig_0.g2002 Utricularia gibba HOM05D004715 ORTHO05D005644 4.8e-25 118.2 108 49.1
Ciclev10027256m.g Citrus clementina HOM05D004715 ORTHO05D005644 6.2e-25 117.9 121 48.8
Duzib235G0750 Durio zibethinus HOM05D004715 ORTHO05D005644 6.2e-25 117.9 125 47.2
BcaC03g15994 Brassica carinata HOM05D004715 ORTHO05D005644 8.1e-25 117.5 119 47.9
A02p23740 Brassica napus HOM05D004715 ORTHO05D005644 8.1e-25 117.5 119 47.9
BraA02t07366Z Brassica rapa HOM05D004715 ORTHO05D005644 8.1e-25 117.5 119 47.9
Thhalv10019155m.g Eutrema salsugineum HOM05D004715 ORTHO05D005644 1.8e-24 116.3 122 48.4
Actinidia01764 Actinidia chinensis HOM05D004715 ORTHO05D005644 2.4e-24 115.9 114 49.1
AL2G41320 Arabidopsis lyrata HOM05D004715 ORTHO05D005644 2.4e-24 115.9 122 48.4
COL.COLO4_12914 Corchorus olitorius HOM05D004715 ORTHO05D005644 2.4e-24 115.9 106 50.0
HanXRQChr15g0463891 Helianthus annuus HOM05D004715 ORTHO05D005644 4.0e-24 115.2 123 48.8
Duzib160G0636 Durio zibethinus HOM05D004715 ORTHO05D005644 5.3e-24 114.8 116 48.3
THA.LOC104812498 Tarenaya hassleriana HOM05D004715 ORTHO05D005644 6.9e-24 114.4 127 47.2
Ah.06g189580 Amaranthus hybridus HOM05D004715 ORTHO05D005644 3.4e-23 112.1 114 50.0
Carub.0002s2733 Capsella rubella HOM05D004715 ORTHO05D005644 3.4e-23 112.1 122 45.9
Carub.0005s0104 Capsella rubella HOM05D004715 ORTHO05D005644 3.4e-23 112.1 122 45.9
Cpa.g.sc10.228 Carica papaya HOM05D004715 ORTHO05D005644 5.8e-23 111.3 123 48.0
Glyma.07G105000 Glycine max HOM05D004715 ORTHO05D005644 9.9e-23 110.5 120 47.5
Rhsim03G0101400 Rhododendron simsii HOM05D004715 ORTHO05D005644 1.3e-22 110.2 104 50.0
BcaB05g25289 Brassica carinata HOM05D004715 ORTHO05D005644 2.2e-22 109.4 122 45.1
BcaB02g07291 Brassica carinata HOM05D004715 ORTHO05D005644 2.9e-22 109.0 122 45.1
Peaxi162Scf01195g00016 Petunia axillaris HOM05D004715 ORTHO05D005644 2.9e-22 109.0 165 37.6
Mapoly0008s0246 Marchantia polymorpha HOM05D004715 ORTHO05D005644 3.8e-22 108.6 131 40.5
Aa31LG4G470 Aethionema arabicum HOM05D004715 ORTHO05D005644 4.9e-22 108.2 117 47.9
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 5.4e-21 104.8 117 42.7
Sp5g35610 Schrenkiella parvula HOM05D004715 ORTHO05D005644 1.2e-20 103.6 117 44.4
TPR.G1424 Trifolium pratense HOM05D004715 ORTHO05D005644 1.6e-20 103.2 103 48.5
ECA234G4462 Erigeron canadensis HOM05D004715 ORTHO05D005644 2.1e-20 102.8 122 39.3
BolC2t09760H Brassica oleracea HOM05D004715 ORTHO05D005644 3.5e-20 102.1 117 44.4
C06p28980 Brassica napus HOM05D004715 ORTHO05D005644 1.0e-19 100.5 117 42.7
BraA07t30299Z Brassica rapa HOM05D004715 ORTHO05D005644 1.8e-19 99.8 107 43.0
vmacro18968 Vaccinium macrocarpon HOM05D004715 ORTHO05D005644 3.0e-19 99.0 168 36.9
Sabra06G0111400 Salix brachista HOM05D004715 ORTHO05D005644 6.7e-19 97.8 183 35.0
Cc00_g27240 Coffea canephora HOM05D004715 ORTHO05D005644 4.3e-18 95.1 75 60.0
BcaC08g45296 Brassica carinata HOM05D004715 ORTHO05D005644 1.6e-17 93.2 117 41.0
TPR.G30851 Trifolium pratense HOM05D004715 ORTHO05D005644 1.6e-17 93.2 78 59.0
BolC6t38064H Brassica oleracea HOM05D004715 ORTHO05D005644 3.6e-17 92.0 117 41.0
TPR.G1414 Trifolium pratense HOM05D004715 ORTHO05D005644 4.5e-15 85.1 72 52.8
Medtr7g052330 Medicago truncatula HOM05D004715 ORTHO05D005644 5.8e-15 84.7 105 42.9
MCO12G383 Micromonas commoda HOM05D004715 ORTHO05D005644 9.3e-13 77.4 109 34.9
TAR623G1252 Trochodendron aralioides HOM05D004715 ORTHO05D005644 3.5e-12 75.5 55 63.6
FAN14G0801 Fragaria x ananassa HOM05D004715 ORTHO05D005644 3.0e-11 72.4 97 39.2
A07p26560 Brassica napus HOM05D004715 ORTHO05D005644 3.9e-11 72.0 78 44.9
Haze_16520 Corylus avellana HOM05D004715 ORTHO05D005644 3.9e-11 72.0 118 35.6
Psat5g222760 Pisum sativum HOM05D004715 ORTHO05D005644 5.6e-10 68.2 68 48.5
CDE09G0533 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 7.4e-10 67.8 43 76.7
FvH4_6g30230 Fragaria vesca HOM05D004715 ORTHO05D005644 7.4e-10 67.8 61 54.1
Hma1.2p1_1398F.1_g280810 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 1.3e-09 67.0 53 58.5
PRCOL_00005608 Prasinoderma coloniale HOM05D004715 ORTHO05D005644 2.8e-09 65.9 118 31.4
Cre03.g161050 Chlamydomonas reinhardtii HOM05D004715 ORTHO05D005644 4.0e-08 62.0 109 35.8
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 4.0e-08 62.0 60 46.7
TPR.G13435 Trifolium pratense HOM05D004715 ORTHO05D005644 6.9e-08 61.2 48 54.2


User provided reference genes

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