Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0855 Ceratophyllum demersum HOM05D000377 ORTHO05D043864 2.6e-83 312.0 157 100.0
CDE09G0468 Ceratophyllum demersum HOM05D000377 ORTHO05D000892 2.7e-24 115.9 65 89.2
CDE02G4493 Ceratophyllum demersum HOM05D000377 ORTHO05D043864 1.3e-18 97.1 57 84.2
CDE06G1034 Ceratophyllum demersum HOM05D000377 ORTHO05D000892 8.9e-15 84.3 66 65.2
MBI04_g06983_MAGBIO Magnolia biondii HOM05D000377 ORTHO05D000892 5.7e-14 81.6 77 58.4
CDE02G0110 Ceratophyllum demersum HOM05D000377 ORTHO05D000892 4.9e-13 78.6 60 63.3
MBI01_g35894_MAGBIO Magnolia biondii HOM05D000377 ORTHO05D000892 3.1e-12 75.9 70 54.3
MSTRG.10589 Avicennia marina HOM05D000377 ORTHO05D000892 7.0e-12 74.7 70 58.6
MSTRG.26399 Avicennia marina HOM05D000377 ORTHO05D000892 3.8e-10 68.9 75 54.7
CiPaw.03G220700 Carya illinoinensis HOM05D000377 ORTHO05D000892 8.6e-10 67.8 62 62.9
CiPaw.04G154000 Carya illinoinensis HOM05D000377 ORTHO05D000892 1.1e-09 67.4 75 52.0
Hma1.2p1_0049F.1_g028160 Hydrangea macrophylla HOM05D000377 ORTHO05D000892 1.1e-09 67.4 60 66.7
Manes.03G057100 Manihot esculenta HOM05D000377 ORTHO05D000892 1.9e-09 66.6 60 63.3
TAR383G0958 Trochodendron aralioides HOM05D000377 ORTHO05D000892 1.9e-09 66.6 60 63.3
Glyma.01G005000 Glycine max HOM05D000377 ORTHO05D000892 2.5e-09 66.2 55 65.5
Cpa.g.sc1427.1 Carica papaya HOM05D000377 ORTHO05D000892 5.6e-09 65.1 58 60.3
Manes.16G076700 Manihot esculenta HOM05D000377 ORTHO05D000892 7.3e-09 64.7 60 63.3
Dinv27951 Davidia involucrata HOM05D000377 ORTHO05D000892 9.5e-09 64.3 59 62.7
Nn8g38990 Nelumbo nucifera HOM05D000377 ORTHO05D000892 9.5e-09 64.3 62 62.9
TWI34G1610 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 9.5e-09 64.3 70 54.3
TWI63G1626 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 2.1e-08 63.2 67 55.2
Cc08_g10070 Coffea canephora HOM05D000377 ORTHO05D000892 2.8e-08 62.8 58 60.3
GSVIVG01035331001 Vitis vinifera HOM05D000377 ORTHO05D000892 2.8e-08 62.8 59 59.3
ClCG03G015890 Citrullus lanatus HOM05D000377 ORTHO05D000892 3.6e-08 62.4 62 58.1
Haze_25857 Corylus avellana HOM05D000377 ORTHO05D000892 3.6e-08 62.4 62 58.1
THA.LOC104820038 Tarenaya hassleriana HOM05D000377 ORTHO05D000892 3.6e-08 62.4 65 52.3
CANSAT25G2273 Cannabis sativa HOM05D000377 ORTHO05D000892 4.7e-08 62.0 64 51.6
Cc06_g10850 Coffea canephora HOM05D000377 ORTHO05D000892 6.1e-08 61.6 64 56.2
Cfa003146 Carpinus fangiana HOM05D000377 ORTHO05D000892 8.0e-08 61.2 62 56.5
Haze_18231 Corylus avellana HOM05D000377 ORTHO05D000892 8.0e-08 61.2 67 58.2
Nitab4.5_0007387g0010 Nicotiana tabacum HOM05D000377 ORTHO05D000892 8.0e-08 61.2 55 60.0
AUR62040207 Chenopodium quinoa HOM05D000377 ORTHO05D000892 1.0e-07 60.8 62 56.5
Dinv36723 Davidia involucrata HOM05D000377 ORTHO05D000892 1.0e-07 60.8 62 56.5
Lj7P696T15 Lonicera japonica HOM05D000377 ORTHO05D000892 1.0e-07 60.8 63 52.4
VMungo0464G0314 Vigna mungo HOM05D000377 ORTHO05D000892 1.4e-07 60.5 59 57.6
CSS0016402 Camellia sinensis var. sinensis HOM05D000377 ORTHO05D000892 1.8e-07 60.1 63 58.7
Ca_25600_v3 Cicer arietinum L. HOM05D000377 ORTHO05D000892 1.8e-07 60.1 64 53.1
Thhalv10002026m.g Eutrema salsugineum HOM05D000377 ORTHO05D000892 1.8e-07 60.1 66 50.0
Lj2g0011464 Lotus japonicus HOM05D000377 ORTHO05D000892 1.8e-07 60.1 63 54.0
Potri.018G058600 Populus trichocarpa HOM05D000377 ORTHO05D000892 1.8e-07 60.1 64 65.6
COL.COLO4_18264 Corchorus olitorius HOM05D000377 ORTHO05D000892 2.3e-07 59.7 62 54.8
Nitab4.5_0000318g0020 Nicotiana tabacum HOM05D000377 ORTHO05D000892 2.3e-07 59.7 55 58.2
TWI32G0438 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 2.3e-07 59.7 60 53.3
Dinv42278 Davidia involucrata HOM05D000377 ORTHO05D000892 3.0e-07 59.3 63 58.7
Lj4P365T8 Lonicera japonica HOM05D000377 ORTHO05D000892 3.0e-07 59.3 64 54.7
Phvul.002G306100 Phaseolus vulgaris HOM05D000377 ORTHO05D000892 3.0e-07 59.3 58 55.2
QL02p040229 Quercus lobata HOM05D000377 ORTHO05D000892 3.0e-07 59.3 63 55.6
ClCG05G017680 Citrullus lanatus HOM05D000377 ORTHO05D000892 4.0e-07 58.9 52 57.7
Duzib187G0242 Durio zibethinus HOM05D000377 ORTHO05D000892 4.0e-07 58.9 61 55.7
PSO210G0647 Papaver somniferum HOM05D000377 ORTHO05D000892 4.0e-07 58.9 66 56.1
Sed0001184 Sechium edule HOM05D000377 ORTHO05D000892 4.0e-07 58.9 61 57.4
THA.LOC104814579 Tarenaya hassleriana HOM05D000377 ORTHO05D000892 4.0e-07 58.9 65 50.8
Thecc.09G095900 Theobroma cacao HOM05D000377 ORTHO05D000892 4.0e-07 58.9 62 56.5
BcaC06g36627 Brassica carinata HOM05D000377 ORTHO05D000892 5.2e-07 58.5 63 50.8
A07p00890 Brassica napus HOM05D000377 ORTHO05D000892 5.2e-07 58.5 63 50.8
C07p02000 Brassica napus HOM05D000377 ORTHO05D000892 5.2e-07 58.5 63 50.8
BolC7t40609H Brassica oleracea HOM05D000377 ORTHO05D000892 5.2e-07 58.5 63 50.8
BraA07t27890Z Brassica rapa HOM05D000377 ORTHO05D000892 5.2e-07 58.5 63 50.8
CAN.G9.12 Capsicum annuum HOM05D000377 ORTHO05D000892 5.2e-07 58.5 55 60.0
Cfa017917 Carpinus fangiana HOM05D000377 ORTHO05D000892 5.2e-07 58.5 61 59.0
Manes.16G105900 Manihot esculenta HOM05D000377 ORTHO05D000892 5.2e-07 58.5 79 48.1
PSO210G0984 Papaver somniferum HOM05D000377 ORTHO05D000892 5.2e-07 58.5 66 56.1
Psat7g019120 Pisum sativum HOM05D000377 ORTHO05D000892 5.2e-07 58.5 57 57.9
Sed0017040 Sechium edule HOM05D000377 ORTHO05D000892 5.2e-07 58.5 63 50.8
CsaV3_1G040060 Cucumis sativus L. HOM05D000377 ORTHO05D000892 6.8e-07 58.2 62 58.1
Peaxi162Scf00840g00021 Petunia axillaris HOM05D000377 ORTHO05D000892 6.8e-07 58.2 55 60.0
Psat1g049520 Pisum sativum HOM05D000377 ORTHO05D000892 6.8e-07 58.2 66 51.5
Sc09g0009550 Simmondsia chinensis HOM05D000377 ORTHO05D000892 6.8e-07 58.2 61 57.4
VMungo0251G3567 Vigna mungo HOM05D000377 ORTHO05D000892 6.8e-07 58.2 58 55.2
CsaV3_UNG046330 Cucumis sativus L. HOM05D000377 ORTHO05D000892 8.9e-07 57.8 61 57.4
Lsat_1_v5_gn_8_88620 Lactuca sativa HOM05D000377 ORTHO05D000892 8.9e-07 57.8 69 55.1
Sabra06G0182700 Salix brachista HOM05D000377 ORTHO05D000892 8.9e-07 57.8 64 65.6
Sp3g33170 Schrenkiella parvula HOM05D000377 ORTHO05D000892 8.9e-07 57.8 63 50.8
GSVIVG01015265001 Vitis vinifera HOM05D000377 ORTHO05D000892 8.9e-07 57.8 52 63.5
ATR0705G053 Amborella trichopoda HOM05D000377 ORTHO05D000892 1.2e-06 57.4 70 48.6
AUR62009210 Chenopodium quinoa HOM05D000377 ORTHO05D000892 1.2e-06 57.4 62 51.6
Duzib168G2195 Durio zibethinus HOM05D000377 ORTHO05D000892 1.2e-06 57.4 62 54.8
PGR044G0240 Punica granatum HOM05D000377 ORTHO05D000892 1.2e-06 57.4 60 56.7
Ah.10g034650 Amaranthus hybridus HOM05D000377 ORTHO05D000892 1.5e-06 57.0 60 55.0
MELO3C015436.2 Cucumis melo HOM05D000377 ORTHO05D000892 1.5e-06 57.0 62 58.1
RcHm_v2.0_Chr2g0092381 Rosa chinensis HOM05D000377 ORTHO05D000892 1.5e-06 57.0 64 53.1
AT2G19810 Arabidopsis thaliana HOM05D000377 ORTHO05D000892 2.0e-06 56.6 72 44.4
EL10Ac2g03955 Beta vulgaris HOM05D000377 ORTHO05D000892 2.0e-06 56.6 62 53.2
MELO3C016852.2 Cucumis melo HOM05D000377 ORTHO05D000892 2.0e-06 56.6 52 53.8
Gohir.A05G027300 Gossypium hirsutum HOM05D000377 ORTHO05D000892 2.0e-06 56.6 62 53.2
Gohir.D05G029200 Gossypium hirsutum HOM05D000377 ORTHO05D000892 2.0e-06 56.6 62 53.2
Phvul.004G173600 Phaseolus vulgaris HOM05D000377 ORTHO05D000892 2.0e-06 56.6 61 54.1
Glyma.05G224400 Glycine max HOM05D000377 ORTHO05D000892 2.6e-06 56.2 61 54.1
Lalb_Chr22g0349861 Lupinus albus HOM05D000377 ORTHO05D000892 2.6e-06 56.2 58 55.2
Gorai.009G029300 Gossypium raimondii HOM05D000377 ORTHO05D000892 3.4e-06 55.8 62 53.2
Aa31LG8G16790 Aethionema arabicum HOM05D000377 ORTHO05D000892 4.4e-06 55.5 64 48.4
A03p58780 Brassica napus HOM05D000377 ORTHO05D000892 4.4e-06 55.5 73 43.8
BraA03t14941Z Brassica rapa HOM05D000377 ORTHO05D000892 4.4e-06 55.5 73 43.8
Sp7g27110 Schrenkiella parvula HOM05D000377 ORTHO05D000892 4.4e-06 55.5 71 46.5
Thecc.09G049700 Theobroma cacao HOM05D000377 ORTHO05D000892 4.4e-06 55.5 61 55.7
TAR624G0702 Trochodendron aralioides HOM05D000377 ORTHO05D000892 4.4e-06 55.5 64 56.2
AL3G48380 Arabidopsis lyrata HOM05D000377 ORTHO05D000892 5.8e-06 55.1 72 44.4
HanXRQChr04g0111011 Helianthus annuus HOM05D000377 ORTHO05D000892 5.8e-06 55.1 59 61.0
Manes.03G029600 Manihot esculenta HOM05D000377 ORTHO05D000892 5.8e-06 55.1 65 52.3
Rhsim03G0235400 Rhododendron simsii HOM05D000377 ORTHO05D000892 5.8e-06 55.1 138 42.8
Ah.11g044480 Amaranthus hybridus HOM05D000377 ORTHO05D000892 7.5e-06 54.7 61 57.4
CsaV3_4G035420 Cucumis sativus L. HOM05D000377 ORTHO05D000892 7.5e-06 54.7 52 53.8
Duzib168G0332 Durio zibethinus HOM05D000377 ORTHO05D000892 7.5e-06 54.7 61 55.7
Glyma.08G031400 Glycine max HOM05D000377 ORTHO05D000892 7.5e-06 54.7 60 51.7
Atru.chr7.2039 Acer truncatum HOM05D000377 ORTHO05D000892 9.8e-06 54.3 57 56.1
CAN.G1241.3 Capsicum annuum HOM05D000377 ORTHO05D000892 9.8e-06 54.3 81 45.7
Ca_17382_v3 Cicer arietinum L. HOM05D000377 ORTHO05D000892 9.8e-06 54.3 63 50.8
Glyma.07G126800 Glycine max HOM05D000377 ORTHO05D000892 9.8e-06 54.3 61 52.5
Medtr6g090380 Medicago truncatula HOM05D000377 ORTHO05D000892 9.8e-06 54.3 68 47.1
Potri.006G234300 Populus trichocarpa HOM05D000377 ORTHO05D000892 9.8e-06 54.3 62 62.9
PGR102G3206 Punica granatum HOM05D000377 ORTHO05D000892 9.8e-06 54.3 63 49.2
Sc08g0008180 Simmondsia chinensis HOM05D000377 ORTHO05D000892 9.8e-06 54.3 65 46.2


User provided reference genes

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