Gene: CSS0016402
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0016402
- Transcript Identifier CSS0016402.1
- Gene Type Coding gene
- Location Chr6 : 44811067-44812200 : positive
Gene Family Information
- ID HOM05D000377
- #Genes/#Species 1292/100
- Phylogenetic origin
- ID ORTHO05D000892
- #Genes/#Species 568/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0016402.1
Descriptions
- Description PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061157 | ISO | PLAZA Integrative Orthology | mRNA destabilization | AT2G25900 |
| GO:0010187 | ISO | PLAZA Integrative Orthology | negative regulation of seed germination | AT1G03790 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | Os01g0192000 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G19810 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | Os01g0192000 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT2G19810 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT2G19810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | Os01g0192000 |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT2G25900 |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT2G25900 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G03790 |
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | AT2G25900 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G19810 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G03790 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G25900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000571 | Zinc finger, CCCH-type |
| Mapman id | Description |
|---|---|
| 16.8.2 | RNA processing.mRNA sequestration.mRNA-binding regulatory factor (TZF) |