Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0770 Ceratophyllum demersum HOM05D003455 ORTHO05D004165 1.2e-203 713.0 362 100.0
TAR371G0709 Trochodendron aralioides HOM05D003455 ORTHO05D004165 7.5e-142 507.7 389 67.9
Nn3g17485 Nelumbo nucifera HOM05D003455 ORTHO05D004165 1.7e-141 506.5 392 67.9
MBI19_g21275_MAGBIO Magnolia biondii HOM05D003455 ORTHO05D004165 2.0e-139 499.6 392 66.8
GSVIVG01032900001 Vitis vinifera HOM05D003455 ORTHO05D004165 3.2e-137 492.3 392 65.8
Prupe.3G252000 Prunus persica HOM05D003455 ORTHO05D004165 4.2e-137 491.9 392 65.1
Aqoxy3G03656 Aquilegia oxysepala HOM05D003455 ORTHO05D004165 1.6e-136 490.0 393 65.1
Atru.chr8.508 Acer truncatum HOM05D003455 ORTHO05D004165 2.8e-136 489.2 393 65.4
CSS0027598 Camellia sinensis var. sinensis HOM05D003455 ORTHO05D004165 4.7e-136 488.4 392 65.3
CSS0034610 Camellia sinensis var. sinensis HOM05D003455 ORTHO05D004165 1.0e-135 487.3 392 65.3
Dinv33837 Davidia involucrata HOM05D003455 ORTHO05D004165 1.4e-135 486.9 392 64.3
CiPaw.04G054200 Carya illinoinensis HOM05D003455 ORTHO05D004165 1.2e-134 483.8 392 64.5
QL93p0053_1015 Quercus lobata HOM05D003455 ORTHO05D004165 1.5e-134 483.4 392 63.8
Duzib147G0154 Durio zibethinus HOM05D003455 ORTHO05D004165 7.5e-134 481.1 392 64.0
QL02p067326 Quercus lobata HOM05D003455 ORTHO05D004165 1.7e-133 479.9 392 63.5
CiPaw.03G087400 Carya illinoinensis HOM05D003455 ORTHO05D004165 2.2e-133 479.6 392 64.8
TWI34G1947 Tripterygium wilfordii HOM05D003455 ORTHO05D004165 2.2e-133 479.6 392 64.3
Lj4A121T77 Lonicera japonica HOM05D003455 ORTHO05D004165 1.8e-132 476.5 392 62.8
TWI32G0721 Tripterygium wilfordii HOM05D003455 ORTHO05D004165 2.4e-132 476.1 392 63.0
COL.COLO4_02772 Corchorus olitorius HOM05D003455 ORTHO05D004165 4.1e-132 475.3 392 63.5
Thecc.04G097900 Theobroma cacao HOM05D003455 ORTHO05D004165 7.0e-132 474.6 392 62.8
CSS0040085 Camellia sinensis var. sinensis HOM05D003455 ORTHO05D004165 9.2e-132 474.2 392 63.0
Ciclev10011854m.g Citrus clementina HOM05D003455 ORTHO05D004165 3.5e-131 472.2 390 63.3
Gorai.006G009500 Gossypium raimondii HOM05D003455 ORTHO05D004165 5.9e-131 471.5 392 63.3
Cpa.g.sc14.196 Carica papaya HOM05D003455 ORTHO05D004165 7.8e-131 471.1 392 62.5
Gohir.A05G381100 Gossypium hirsutum HOM05D003455 ORTHO05D004165 3.8e-130 468.8 389 63.0
Eucgr.I02041 Eucalyptus grandis HOM05D003455 ORTHO05D004165 1.9e-129 466.5 392 61.5
Sed0017731 Sechium edule HOM05D003455 ORTHO05D004165 2.5e-129 466.1 392 62.2
Gohir.D04G034300 Gossypium hirsutum HOM05D003455 ORTHO05D004165 4.3e-129 465.3 392 61.7
Gohir.D09G007900 Gossypium hirsutum HOM05D003455 ORTHO05D004165 5.6e-129 464.9 392 62.8
Manes.01G094700 Manihot esculenta HOM05D003455 ORTHO05D004165 5.6e-129 464.9 394 63.2
Duzib264G0955 Durio zibethinus HOM05D003455 ORTHO05D004165 7.3e-129 464.5 392 61.7
CsaV3_5G038560 Cucumis sativus L. HOM05D003455 ORTHO05D004165 2.1e-128 463.0 392 61.0
Hma1.2p1_0069F.1_g037360 Hydrangea macrophylla HOM05D003455 ORTHO05D004165 2.1e-128 463.0 392 61.2
MD09G1068800 Malus domestica HOM05D003455 ORTHO05D004165 6.1e-128 461.5 392 61.7
CANSAT64G0930 Cannabis sativa HOM05D003455 ORTHO05D004165 1.0e-127 460.7 392 60.5
MD17G1061800 Malus domestica HOM05D003455 ORTHO05D004165 1.4e-127 460.3 404 59.2
Manes.02G056600 Manihot esculenta HOM05D003455 ORTHO05D004165 1.8e-127 459.9 394 62.4
Potri.017G095300 Populus trichocarpa HOM05D003455 ORTHO05D004165 2.3e-127 459.5 394 61.4
Nitab4.5_0009044g0070 Nicotiana tabacum HOM05D003455 ORTHO05D004165 3.0e-127 459.1 392 59.9
Hma1.2p1_1555F.1_g290410 Hydrangea macrophylla HOM05D003455 ORTHO05D004165 5.2e-127 458.4 392 61.2
PGR004G0056 Punica granatum HOM05D003455 ORTHO05D004165 3.4e-126 455.7 392 61.2
ClCG11G004850 Citrullus lanatus HOM05D003455 ORTHO05D004165 4.4e-126 455.3 425 57.4
Migut.K01264 Erythranthe guttata HOM05D003455 ORTHO05D004165 4.4e-126 455.3 392 59.2
Gorai.012G038600 Gossypium raimondii HOM05D003455 ORTHO05D004165 4.4e-126 455.3 418 58.1
Potri.004G116700 Populus trichocarpa HOM05D003455 ORTHO05D004165 4.4e-126 455.3 394 61.2
Cc07_g04370 Coffea canephora HOM05D003455 ORTHO05D004165 1.7e-125 453.4 392 60.2
Nitab4.5_0000212g0320 Nicotiana tabacum HOM05D003455 ORTHO05D004165 1.7e-125 453.4 392 59.9
Hund17038 Selenicereus undatus HOM05D003455 ORTHO05D004165 2.2e-125 453.0 392 61.2
ATR0794G008 Amborella trichopoda HOM05D003455 ORTHO05D004165 3.7e-125 452.2 390 62.1
Sc26g0001300 Simmondsia chinensis HOM05D003455 ORTHO05D004165 4.9e-125 451.8 392 61.5
MSTRG.15442 Avicennia marina HOM05D003455 ORTHO05D004165 6.4e-125 451.4 392 59.7
Sabra17G0084500 Salix brachista HOM05D003455 ORTHO05D004165 1.1e-124 450.7 394 60.4
DCAR_011034 Daucus carota HOM05D003455 ORTHO05D004165 2.4e-124 449.5 489 50.7
HanXRQChr15g0472411 Helianthus annuus HOM05D003455 ORTHO05D004165 2.4e-124 449.5 392 58.7
Peaxi162Scf00166g00342 Petunia axillaris HOM05D003455 ORTHO05D004165 2.4e-124 449.5 392 58.7
ECA246G2096 Erigeron canadensis HOM05D003455 ORTHO05D004165 3.2e-124 449.1 392 59.2
SabraUnG0001900 Salix brachista HOM05D003455 ORTHO05D004165 2.7e-123 446.0 394 59.9
ECA238G0586 Erigeron canadensis HOM05D003455 ORTHO05D004165 3.5e-123 445.7 392 58.7
vmacro18140 Vaccinium macrocarpon HOM05D003455 ORTHO05D004165 3.5e-123 445.7 380 62.4
Peaxi162Scf00563g00315 Petunia axillaris HOM05D003455 ORTHO05D004165 7.8e-123 444.5 392 59.2
Oeu004418.1 Olea europaea HOM05D003455 ORTHO05D004165 1.0e-122 444.1 393 59.3
ATR0827G178 Amborella trichopoda HOM05D003455 ORTHO05D004165 1.7e-122 443.4 390 60.8
MSTRG.3364 Avicennia marina HOM05D003455 ORTHO05D004165 1.7e-122 443.4 393 57.0
Lsat_1_v5_gn_2_89540 Lactuca sativa HOM05D003455 ORTHO05D004165 1.7e-122 443.4 392 58.7
Glyma.20G089400 Glycine max HOM05D003455 ORTHO05D004165 3.0e-122 442.6 392 57.4
Psat1g068920 Pisum sativum HOM05D003455 ORTHO05D004165 8.6e-122 441.0 392 57.9
HanXRQChr17g0546121 Helianthus annuus HOM05D003455 ORTHO05D004165 1.5e-121 440.3 392 59.2
PGSC0003DMG400001365 Solanum tuberosum HOM05D003455 ORTHO05D004165 1.5e-121 440.3 392 57.7
AUR62004181 Chenopodium quinoa HOM05D003455 ORTHO05D004165 1.9e-121 439.9 392 58.7
Medtr6g015395 Medicago truncatula HOM05D003455 ORTHO05D004165 1.9e-121 439.9 392 57.7
RcHm_v2.0_Chr2g0165551 Rosa chinensis HOM05D003455 ORTHO05D004165 1.9e-121 439.9 392 57.7
Cfa007317 Carpinus fangiana HOM05D003455 ORTHO05D004165 3.3e-121 439.1 392 59.4
Lj2g0003959 Lotus japonicus HOM05D003455 ORTHO05D004165 4.3e-121 438.7 392 57.1
Nitab4.5_0003932g0020 Nicotiana tabacum HOM05D003455 ORTHO05D004165 7.3e-121 438.0 392 58.2
Sopen02g033830 Solanum pennellii HOM05D003455 ORTHO05D004165 9.5e-121 437.6 392 57.1
VMungo0720G0561 Vigna mungo HOM05D003455 ORTHO05D004165 9.5e-121 437.6 392 57.4
Glyma.13G055200 Glycine max HOM05D003455 ORTHO05D004165 1.6e-120 436.8 392 57.7
AUR62013681 Chenopodium quinoa HOM05D003455 ORTHO05D004165 2.1e-120 436.4 392 58.4
Glyma.10G140700 Glycine max HOM05D003455 ORTHO05D004165 3.6e-120 435.6 392 56.6
Medtr7g091480 Medicago truncatula HOM05D003455 ORTHO05D004165 3.6e-120 435.6 392 56.9
SGA_v2.0_scaffold154G37123 Striga asiatica HOM05D003455 ORTHO05D004165 3.6e-120 435.6 396 56.6
Phvul.007G207400 Phaseolus vulgaris HOM05D003455 ORTHO05D004165 4.7e-120 435.3 392 57.1
Ca_04310_v3 Cicer arietinum L. HOM05D003455 ORTHO05D004165 6.2e-120 434.9 392 56.9
THA.LOC104822323 Tarenaya hassleriana HOM05D003455 ORTHO05D004165 1.0e-119 434.1 392 57.9
SalBow1G0092 Salvia bowleyana HOM05D003455 ORTHO05D004165 1.4e-119 433.7 392 56.1
TPR.G4293 Trifolium pratense HOM05D003455 ORTHO05D004165 1.4e-119 433.7 393 57.0
Phvul.004G038200 Phaseolus vulgaris HOM05D003455 ORTHO05D004165 2.3e-119 433.0 392 56.6
FvH4_6g46660 Fragaria vesca HOM05D003455 ORTHO05D004165 4.0e-119 432.2 392 57.1
Lsat_1_v5_gn_3_95981 Lactuca sativa HOM05D003455 ORTHO05D004165 3.4e-118 429.1 375 59.5
Solyc02g089070.3 Solanum lycopersicum HOM05D003455 ORTHO05D004165 4.4e-118 428.7 392 56.1
BcaC05g30332 Brassica carinata HOM05D003455 ORTHO05D004165 9.8e-118 427.6 369 59.1
Haze_14415 Corylus avellana HOM05D003455 ORTHO05D004165 1.3e-117 427.2 359 62.7
Peaxi162Scf00991g00014 Petunia axillaris HOM05D003455 ORTHO05D004165 2.9e-117 426.0 415 55.7
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 3.7e-117 425.6 378 57.7
EL10Ac1g00859 Beta vulgaris HOM05D003455 ORTHO05D004165 1.9e-116 423.3 436 53.9
arahy.Tifrunner.gnm1.ann1.87INZE Arachis hypogaea HOM05D003455 ORTHO05D004165 7.0e-116 421.4 392 54.8
FAN09G2387 Fragaria x ananassa HOM05D003455 ORTHO05D004165 1.2e-115 420.6 392 56.1
PSO017G2371 Papaver somniferum HOM05D003455 ORTHO05D004165 2.0e-115 419.9 392 57.1
FAN02G3143 Fragaria x ananassa HOM05D003455 ORTHO05D004165 4.6e-115 418.7 392 56.1
FAN05G4304 Fragaria x ananassa HOM05D003455 ORTHO05D004165 4.6e-115 418.7 392 56.1
Lalb_Chr06g0174911 Lupinus albus HOM05D003455 ORTHO05D004165 4.6e-115 418.7 393 56.0
PSO478G0569 Papaver somniferum HOM05D003455 ORTHO05D004165 1.7e-114 416.8 392 57.7
MELO3C022038.2 Cucumis melo HOM05D003455 ORTHO05D004165 2.3e-114 416.4 324 65.7
Sp6g28490 Schrenkiella parvula HOM05D003455 ORTHO05D004165 5.0e-114 415.2 392 54.8
unitig_748.g8420 Utricularia gibba HOM05D003455 ORTHO05D004165 5.0e-114 415.2 393 54.5
Sabra04G0070200 Salix brachista HOM05D003455 ORTHO05D004165 8.6e-114 414.5 448 51.8
AT5G15610 Arabidopsis thaliana HOM05D003455 ORTHO05D004165 1.1e-113 414.1 392 55.1
CARHR076170 Cardamine hirsuta HOM05D003455 ORTHO05D004165 4.3e-113 412.1 392 54.6
Thhalv10020815m.g Eutrema salsugineum HOM05D003455 ORTHO05D004165 1.6e-112 410.2 392 54.8
Thhalv10013660m.g Eutrema salsugineum HOM05D003455 ORTHO05D004165 2.1e-112 409.8 392 55.6
CAN.G497.93 Capsicum annuum HOM05D003455 ORTHO05D004165 2.8e-112 409.5 365 58.6
BcaC01g04477 Brassica carinata HOM05D003455 ORTHO05D004165 6.2e-112 408.3 392 55.4
Carub.0003s0132 Capsella rubella HOM05D003455 ORTHO05D004165 1.8e-111 406.8 392 55.1
arahy.Tifrunner.gnm1.ann1.S4R36H Arachis hypogaea HOM05D003455 ORTHO05D004165 2.3e-111 406.4 381 54.3
Carub.0006s1377 Capsella rubella HOM05D003455 ORTHO05D004165 5.2e-111 405.2 392 54.6
FAN14G2996 Fragaria x ananassa HOM05D003455 ORTHO05D004165 5.2e-111 405.2 417 52.8
AL6G26470 Arabidopsis lyrata HOM05D003455 ORTHO05D004165 8.9e-111 404.4 393 53.7
BcaC01g04475 Brassica carinata HOM05D003455 ORTHO05D004165 8.9e-111 404.4 392 54.3
CARHR197710 Cardamine hirsuta HOM05D003455 ORTHO05D004165 8.9e-111 404.4 392 53.8
Lalb_Chr02g0158861 Lupinus albus HOM05D003455 ORTHO05D004165 1.5e-110 403.7 393 53.9
Sp3g01270 Schrenkiella parvula HOM05D003455 ORTHO05D004165 1.5e-110 403.7 392 54.8
Aa31LG11G13970 Aethionema arabicum HOM05D003455 ORTHO05D004165 5.8e-110 401.7 392 54.1
SEGI_08931 Sequoiadendron giganteum HOM05D003455 ORTHO05D004165 2.2e-109 399.8 370 57.0
Actinidia17593 Actinidia chinensis HOM05D003455 ORTHO05D004165 3.7e-109 399.1 336 62.8
A03p32840 Brassica napus HOM05D003455 ORTHO05D004165 6.4e-109 398.3 393 53.7
BraA03t12453Z Brassica rapa HOM05D003455 ORTHO05D004165 1.1e-108 397.5 393 53.7
A05p45080 Brassica napus HOM05D003455 ORTHO05D004165 1.4e-108 397.1 408 52.2
BraA05t23153Z Brassica rapa HOM05D003455 ORTHO05D004165 1.4e-108 397.1 408 52.2
Nitab4.5_0005596g0050 Nicotiana tabacum HOM05D003455 ORTHO05D004165 5.4e-108 395.2 392 53.3
C09p75580 Brassica napus HOM05D003455 ORTHO05D004165 7.1e-108 394.8 403 52.6
AL3G11450 Arabidopsis lyrata HOM05D003455 ORTHO05D004165 1.2e-107 394.0 392 52.8
C03p39970 Brassica napus HOM05D003455 ORTHO05D004165 7.8e-107 391.3 393 52.7
BolC3t16262H Brassica oleracea HOM05D003455 ORTHO05D004165 1.0e-106 391.0 393 52.7
BolC5t35100H Brassica oleracea HOM05D003455 ORTHO05D004165 9.5e-105 384.4 400 52.0
Oeu007070.2 Olea europaea HOM05D003455 ORTHO05D004165 2.8e-104 382.9 442 48.6
SMO174G0231 Selaginella moellendorffii HOM05D003455 ORTHO05D004165 3.6e-104 382.5 394 51.3
Aa31LG5G12730 Aethionema arabicum HOM05D003455 ORTHO05D004165 4.0e-103 379.0 371 54.4
A03p07220 Brassica napus HOM05D003455 ORTHO05D004165 1.5e-102 377.1 406 50.2
Zm00001eb337010 Zea mays HOM05D003455 ORTHO05D004165 4.4e-102 375.6 397 50.4
C03p08220 Brassica napus HOM05D003455 ORTHO05D004165 9.9e-102 374.4 378 52.1
BcaC01g04456 Brassica carinata HOM05D003455 ORTHO05D004165 6.4e-101 371.7 409 50.6
AagrBONN_evm.TU.Sc2ySwM_117.3585 Anthoceros agrestis HOM05D003455 ORTHO05D004165 1.9e-100 370.2 392 48.2
BolC3t13319H Brassica oleracea HOM05D003455 ORTHO05D004165 1.9e-100 370.2 384 51.6
BraA03t10044Z Brassica rapa HOM05D003455 ORTHO05D004165 4.1e-100 369.0 406 49.3
Os04g0103200 Oryza sativa ssp. japonica HOM05D003455 ORTHO05D004165 4.1e-100 369.0 398 50.0
AT3G02200 Arabidopsis thaliana HOM05D003455 ORTHO05D004165 3.5e-99 365.9 328 57.6
Peaxi162Scf00043g00181 Petunia axillaris HOM05D003455 ORTHO05D004165 2.5e-97 359.8 336 55.7
Mapoly0097s0065 Marchantia polymorpha HOM05D003455 ORTHO05D004165 2.8e-96 356.3 392 46.7
BcaC01g04476 Brassica carinata HOM05D003455 ORTHO05D004165 4.7e-96 355.5 325 56.6
Pp3c14_18640 Physcomitrium patens HOM05D003455 ORTHO05D004165 1.5e-94 350.5 395 46.8
Pp3c14_18645 Physcomitrium patens HOM05D003455 ORTHO05D004165 1.5e-94 350.5 395 46.8
Pp3c17_21330 Physcomitrium patens HOM05D003455 ORTHO05D004165 1.9e-92 343.6 395 46.6
BolC1t05918H Brassica oleracea HOM05D003455 ORTHO05D002350 1.4e-87 327.4 324 53.7
BcaC09g47686 Brassica carinata HOM05D003455 ORTHO05D002350 9.0e-87 324.7 324 53.1
SEGI_28709 Sequoiadendron giganteum HOM05D003455 ORTHO05D004165 4.9e-85 318.9 318 53.5
BcaB01g05043 Brassica carinata HOM05D003455 ORTHO05D004165 8.7e-82 308.1 286 56.3
BraA01t04626Z Brassica rapa HOM05D003455 ORTHO05D002350 8.7e-82 308.1 357 48.7
CBR_g38096 Chara braunii HOM05D003455 ORTHO05D004165 2.4e-76 290.0 390 40.0
Gohir.A09G008500 Gossypium hirsutum HOM05D003455 ORTHO05D004165 3.9e-74 282.7 255 58.0
MD17G1062900 Malus domestica HOM05D003455 ORTHO05D004165 7.4e-73 278.5 347 48.1
TAR622G0123 Trochodendron aralioides HOM05D003455 ORTHO05D004165 3.8e-69 266.2 255 57.6
Actinidia26257 Actinidia chinensis HOM05D003455 ORTHO05D004165 1.9e-68 263.8 178 71.9
BNapus_Darmor_BZH_scaffold_113p00190 Brassica napus HOM05D003455 ORTHO05D002350 7.9e-67 258.5 256 52.3
EL10As12g24037 Beta vulgaris HOM05D003455 ORTHO05D004165 2.5e-57 226.9 176 65.9
Lalb_Chr21g0318341 Lupinus albus HOM05D003455 ORTHO05D004165 5.3e-55 219.2 292 45.5
ECA247G2972 Erigeron canadensis HOM05D003455 ORTHO05D004165 2.6e-54 216.9 164 66.5
CDE09G1009 Ceratophyllum demersum HOM05D003455 ORTHO05D004165 2.3e-50 203.8 173 67.6
RcHm_v2.0_Chr2g0165331 Rosa chinensis HOM05D003455 ORTHO05D004165 3.7e-48 196.4 164 60.4
PGSC0003DMG400037406 Solanum tuberosum HOM05D003455 ORTHO05D004165 7.0e-39 165.6 185 50.3
RcHm_v2.0_Chr2g0165441 Rosa chinensis HOM05D003455 ORTHO05D004165 6.7e-34 149.1 207 40.6
RcHm_v2.0_Chr2g0165451 Rosa chinensis HOM05D003455 ORTHO05D004165 7.0e-31 139.0 95 70.5
Gohir.A09G008600 Gossypium hirsutum HOM05D003455 ORTHO05D004165 7.0e-23 112.5 71 77.5
MCO16G226 Micromonas commoda HOM05D003455 ORTHO05D004165 7.0e-23 112.5 385 25.5
TAR622G0706 Trochodendron aralioides HOM05D003455 ORTHO05D004165 6.5e-21 105.9 76 69.7
Pp3c17_21340 Physcomitrium patens HOM05D003455 ORTHO05D004165 3.0e-18 97.1 70 61.4
PGSC0003DMG400040047 Solanum tuberosum HOM05D003455 ORTHO05D004165 7.5e-17 92.4 173 37.6
MELO3C000027.2 Cucumis melo HOM05D003455 ORTHO05D004165 2.7e-14 84.0 75 50.7
RcHm_v2.0_Chr2g0157101 Rosa chinensis HOM05D003455 ORTHO05D004165 8.6e-13 79.0 67 55.2
Lalb_Chr21g0318331 Lupinus albus HOM05D003455 ORTHO05D004165 4.4e-09 66.6 97 39.2
Cc00_g06870 Coffea canephora HOM05D003455 ORTHO05D004165 2.2e-08 64.3 47 61.7
vmacro05008 Vaccinium macrocarpon HOM05D000208 ORTHO05D426771 2.4e-07 60.8 50 62.0
HanXRQChr04g0103071 Helianthus annuus HOM05D003455 ORTHO05D004165 5.4e-07 59.7 44 65.9
Lj1A454T5 Lonicera japonica HOM05D003455 ORTHO05D004165 6.0e-06 56.2 52 48.1
Lj1A457T7 Lonicera japonica HOM05D003455 ORTHO05D004165 7.8e-06 55.8 52 48.1


User provided reference genes

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