Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0395 Ceratophyllum demersum HOM05D000649 ORTHO05D000513 7.0e-104 380.6 183 100.0
CDE02G4535 Ceratophyllum demersum HOM05D000649 ORTHO05D000513 5.2e-59 231.5 121 90.1
GSVIVG01016345001 Vitis vinifera HOM05D000649 ORTHO05D000513 2.0e-26 123.2 126 53.2
Nn2g10650 Nelumbo nucifera HOM05D000649 ORTHO05D000513 2.9e-25 119.4 136 50.0
Prupe.2G219600 Prunus persica HOM05D000649 ORTHO05D000513 2.9e-25 119.4 122 54.1
TAR623G0213 Trochodendron aralioides HOM05D000649 ORTHO05D000513 1.9e-24 116.7 116 56.0
CiPaw.01G276800 Carya illinoinensis HOM05D000649 ORTHO05D000513 4.2e-24 115.5 129 48.8
Ciclev10032535m.g Citrus clementina HOM05D000649 ORTHO05D000513 5.5e-24 115.2 128 53.1
Thecc.10G067300 Theobroma cacao HOM05D000649 ORTHO05D000513 7.1e-24 114.8 127 48.8
FAN03G1278 Fragaria x ananassa HOM05D000649 ORTHO05D000513 9.3e-24 114.4 115 57.4
COL.COLO4_23756 Corchorus olitorius HOM05D000649 ORTHO05D000513 3.5e-23 112.5 134 49.3
Dinv11813 Davidia involucrata HOM05D000649 ORTHO05D000513 7.9e-23 111.3 128 49.2
Duzib114G0256 Durio zibethinus HOM05D000649 ORTHO05D000513 7.9e-23 111.3 131 48.9
CSS0019082 Camellia sinensis var. sinensis HOM05D000649 ORTHO05D000513 1.3e-22 110.5 115 52.2
FvH4_7g20260 Fragaria vesca HOM05D000649 ORTHO05D000513 1.3e-22 110.5 113 56.6
FAN06G2888 Fragaria x ananassa HOM05D000649 ORTHO05D000513 1.3e-22 110.5 113 56.6
Nn2g12988 Nelumbo nucifera HOM05D000649 ORTHO05D000513 1.3e-22 110.5 117 51.3
RcHm_v2.0_Chr1g0364201 Rosa chinensis HOM05D000649 ORTHO05D000513 1.8e-22 110.2 140 50.7
Cpa.g.sc1.263 Carica papaya HOM05D000649 ORTHO05D000513 5.1e-22 108.6 128 49.2
FAN01G0433 Fragaria x ananassa HOM05D000649 ORTHO05D000513 5.1e-22 108.6 114 55.3
FAN03G2790 Fragaria x ananassa HOM05D000649 ORTHO05D000513 5.1e-22 108.6 114 55.3
Dinv31360 Davidia involucrata HOM05D000649 ORTHO05D000513 6.7e-22 108.2 107 51.4
Gohir.D10G215900 Gossypium hirsutum HOM05D000649 ORTHO05D000513 6.7e-22 108.2 132 49.2
Gorai.011G241500 Gossypium raimondii HOM05D000649 ORTHO05D000513 6.7e-22 108.2 132 49.2
Aqoxy4G03189 Aquilegia oxysepala HOM05D000649 ORTHO05D000513 8.7e-22 107.8 126 52.4
Manes.10G041600 Manihot esculenta HOM05D000649 ORTHO05D000513 8.7e-22 107.8 108 53.7
Gohir.A05G298000 Gossypium hirsutum HOM05D000649 ORTHO05D000513 3.3e-21 105.9 116 50.0
Nitab4.5_0000061g0270 Nicotiana tabacum HOM05D000649 ORTHO05D000513 4.3e-21 105.5 113 50.4
TWI38G1801 Tripterygium wilfordii HOM05D000649 ORTHO05D000513 4.3e-21 105.5 132 45.5
Gohir.A10G207800 Gossypium hirsutum HOM05D000649 ORTHO05D000513 5.6e-21 105.1 132 47.7
QL08p056912 Quercus lobata HOM05D000649 ORTHO05D000513 5.6e-21 105.1 117 50.4
Sabra10G0167700 Salix brachista HOM05D000649 ORTHO05D000513 5.6e-21 105.1 125 50.4
FAN10G4270 Fragaria x ananassa HOM05D000649 ORTHO05D000513 7.4e-21 104.8 140 48.6
Gorai.009G315100 Gossypium raimondii HOM05D000649 ORTHO05D000513 7.4e-21 104.8 115 49.6
Potri.008G044700 Populus trichocarpa HOM05D000649 ORTHO05D000513 1.6e-20 103.6 115 52.2
TWI15G0396 Tripterygium wilfordii HOM05D000649 ORTHO05D000513 2.8e-20 102.8 130 45.4
Potri.010G216800 Populus trichocarpa HOM05D000649 ORTHO05D000513 4.8e-20 102.1 116 51.7
Solyc04g049920.4 Solanum lycopersicum HOM05D000649 ORTHO05D000513 6.2e-20 101.7 110 51.8
Sopen04g020550 Solanum pennellii HOM05D000649 ORTHO05D000513 6.2e-20 101.7 114 50.0
Actinidia03025 Actinidia chinensis HOM05D000649 ORTHO05D000513 8.2e-20 101.3 113 50.4
Gohir.D05G297800 Gossypium hirsutum HOM05D000649 ORTHO05D000513 8.2e-20 101.3 115 47.8
Atru.chr12.630 Acer truncatum HOM05D000649 ORTHO05D000513 1.1e-19 100.9 127 49.6
Oeu055048.1 Olea europaea HOM05D000649 ORTHO05D000513 1.1e-19 100.9 111 49.5
Duzib106G0453 Durio zibethinus HOM05D000649 ORTHO05D000513 1.4e-19 100.5 120 51.7
Actinidia38245 Actinidia chinensis HOM05D000649 ORTHO05D000513 4.0e-19 99.0 118 49.2
FAN06G1963 Fragaria x ananassa HOM05D000649 ORTHO05D000513 6.9e-19 98.2 102 54.9
Sabra08G0031000 Salix brachista HOM05D000649 ORTHO05D000513 6.9e-19 98.2 127 48.8
Duzib128G1801 Durio zibethinus HOM05D000649 ORTHO05D000513 2.6e-18 96.3 119 50.4
Peaxi162Scf00208g00005 Petunia axillaris HOM05D000649 ORTHO05D000513 3.4e-18 95.9 138 39.9
MBI14_g20613_MAGBIO Magnolia biondii HOM05D000649 ORTHO05D000513 4.5e-18 95.5 154 44.8
ClCG02G013870 Citrullus lanatus HOM05D000649 ORTHO05D000513 5.8e-18 95.1 114 48.2
PSO339G0426 Papaver somniferum HOM05D000649 ORTHO05D000513 5.8e-18 95.1 127 43.3
EL10Ac2g03552 Beta vulgaris HOM05D000649 ORTHO05D000513 1.0e-17 94.4 129 45.0
MD07G1180100 Malus domestica HOM05D000649 ORTHO05D000513 1.0e-17 94.4 116 50.0
Haze_16939 Corylus avellana HOM05D000649 ORTHO05D000513 2.2e-17 93.2 87 57.5
Rhsim03G0122600 Rhododendron simsii HOM05D000649 ORTHO05D000513 2.2e-17 93.2 125 42.4
CANSAT56G1591 Cannabis sativa HOM05D000649 ORTHO05D000513 3.8e-17 92.4 111 47.7
PSO063G5918 Papaver somniferum HOM05D000649 ORTHO05D000513 3.8e-17 92.4 127 41.7
CSS0015108 Camellia sinensis var. sinensis HOM05D000649 ORTHO05D000513 4.9e-17 92.0 118 49.2
Manes.12G041300 Manihot esculenta HOM05D000649 ORTHO05D000513 4.9e-17 92.0 119 42.9
CsaV3_5G006290 Cucumis sativus L. HOM05D000649 ORTHO05D000513 6.5e-17 91.7 105 48.6
PGSC0003DMG400010572 Solanum tuberosum HOM05D000649 ORTHO05D000513 6.5e-17 91.7 111 45.0
Sed0004219 Sechium edule HOM05D000649 ORTHO05D000513 1.1e-16 90.9 107 47.7
PGR142G2938 Punica granatum HOM05D000649 ORTHO05D000513 3.2e-16 89.4 137 43.1
Eucgr.G02798 Eucalyptus grandis HOM05D000649 ORTHO05D000513 7.9e-15 84.7 124 41.9
Cc09_g02630 Coffea canephora HOM05D000649 ORTHO05D000513 1.3e-12 77.4 77 51.9
ECA238G2381 Erigeron canadensis HOM05D000649 ORTHO05D000513 1.6e-12 77.0 120 40.0
Nitab4.5_0002677g0040 Nicotiana tabacum HOM05D000649 ORTHO05D000513 2.2e-12 76.6 119 39.5
SGA_v2.0_scaffold71G24036 Striga asiatica HOM05D000649 ORTHO05D000513 2.2e-12 76.6 149 40.9
MD01G1112300 Malus domestica HOM05D000649 ORTHO05D000513 6.3e-12 75.1 135 41.5
Oeu007708.1 Olea europaea HOM05D000649 ORTHO05D000513 3.1e-11 72.8 118 41.5
PSO384G2433 Papaver somniferum HOM05D000649 ORTHO05D000513 6.9e-11 71.6 125 43.2
PSO339G4584 Papaver somniferum HOM05D000649 ORTHO05D000513 1.5e-10 70.5 125 43.2
Carub.0005s2136 Capsella rubella HOM05D000649 ORTHO05D000513 7.7e-10 68.2 106 37.7
Glyma.07G046900 Glycine max HOM05D000649 ORTHO05D000513 1.3e-09 67.4 95 43.2
Phvul.010G122000 Phaseolus vulgaris HOM05D000649 ORTHO05D000513 1.3e-09 67.4 97 41.2
DCAR_006467 Daucus carota HOM05D000855 ORTHO05D002321 2.9e-09 66.2 143 36.4
Migut.F01797 Erythranthe guttata HOM05D000649 ORTHO05D000513 2.9e-09 66.2 78 47.4
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 1.1e-08 64.3 94 40.4
CARHR164720 Cardamine hirsuta HOM05D000649 ORTHO05D000513 1.1e-08 64.3 136 33.1
AUR62020799 Chenopodium quinoa HOM05D000649 ORTHO05D000513 1.1e-08 64.3 93 40.9
Glyma.16G015300 Glycine max HOM05D000649 ORTHO05D000513 1.9e-08 63.5 90 41.1
VMungo0331G1558 Vigna mungo HOM05D000649 ORTHO05D000513 3.2e-08 62.8 97 40.2
arahy.Tifrunner.gnm1.ann1.SKE9RM Arachis hypogaea HOM05D000649 ORTHO05D000513 4.2e-08 62.4 73 41.1
BcaB02g08460 Brassica carinata HOM05D000649 ORTHO05D000513 4.6e-07 58.9 77 42.9
ATR1159G068 Amborella trichopoda HOM05D000649 ORTHO05D000513 7.9e-07 58.2 125 35.2
Thhalv10010639m.g Eutrema salsugineum HOM05D000649 ORTHO05D000513 1.8e-06 57.0 124 34.7
BolC8t50601H Brassica oleracea HOM05D000649 ORTHO05D000513 2.3e-06 56.6 137 31.4


User provided reference genes

Program Settings