Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0367 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 2.6e-222 775.0 377 100.0
CDE09G0928 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 7.7e-81 305.1 505 43.6
Dinv14976 Davidia involucrata HOM05D000366 ORTHO05D000437 4.4e-20 103.2 70 58.6
Haze_09342 Corylus avellana HOM05D000366 ORTHO05D000437 2.4e-18 97.4 71 59.2
Dinv18351 Davidia involucrata HOM05D000366 ORTHO05D000437 7.1e-18 95.9 70 55.7
Nn1g09076 Nelumbo nucifera HOM05D000366 ORTHO05D000437 9.2e-18 95.5 71 57.7
Nn051s41923 Nelumbo nucifera HOM05D000366 ORTHO05D000437 2.7e-17 94.0 69 58.0
Cfa019583 Carpinus fangiana HOM05D000366 ORTHO05D000437 3.5e-17 93.6 71 56.3
CiPaw.11G161800 Carya illinoinensis HOM05D000366 ORTHO05D000437 1.1e-15 88.6 70 55.7
Aqoxy4G00413 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 4.3e-15 86.7 71 56.3
CSS0049132 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 4.3e-15 86.7 71 52.1
Actinidia12564 Actinidia chinensis HOM05D000366 ORTHO05D000437 5.6e-15 86.3 77 50.6
Actinidia35218 Actinidia chinensis HOM05D000366 ORTHO05D000437 5.6e-15 86.3 72 52.8
HanXRQChr10g0304861 Helianthus annuus HOM05D000366 ORTHO05D000437 9.5e-15 85.5 71 52.1
Actinidia31603 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.2e-14 85.1 75 52.0
vmacro11922 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 1.2e-14 85.1 71 53.5
GSVIVG01014219001 Vitis vinifera HOM05D000366 ORTHO05D000437 1.6e-14 84.7 71 53.5
Rhsim06G0206400 Rhododendron simsii HOM05D000366 ORTHO05D000437 3.6e-14 83.6 71 53.5
TAR626G0976 Trochodendron aralioides HOM05D000366 ORTHO05D000437 3.6e-14 83.6 71 50.7
Sabra16G0257700 Salix brachista HOM05D000366 ORTHO05D000437 4.7e-14 83.2 71 52.1
Thecc.07G107600 Theobroma cacao HOM05D000366 ORTHO05D000437 4.7e-14 83.2 71 50.7
Eucgr.F01223 Eucalyptus grandis HOM05D000366 ORTHO05D000437 6.2e-14 82.8 71 47.9
Lsat_1_v5_gn_5_127360 Lactuca sativa HOM05D000366 ORTHO05D000437 8.1e-14 82.4 71 54.9
Oeu051127.1 Olea europaea HOM05D000366 ORTHO05D000437 1.4e-13 81.6 72 50.0
CSS0001097 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 1.8e-13 81.3 76 47.4
Migut.H01986 Erythranthe guttata HOM05D000366 ORTHO05D000437 2.3e-13 80.9 72 45.8
PSO063G4839 Papaver somniferum HOM05D000366 ORTHO05D000437 2.3e-13 80.9 72 51.4
Peaxi162Scf00069g02134 Petunia axillaris HOM05D000366 ORTHO05D000437 2.3e-13 80.9 71 50.7
Potri.001G392801 Populus trichocarpa HOM05D000366 ORTHO05D000437 2.3e-13 80.9 71 50.7
MSTRG.12872 Avicennia marina HOM05D000366 ORTHO05D000437 3.1e-13 80.5 72 45.8
vmacro09499 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 4.0e-13 80.1 70 50.0
ATR0787G219 Amborella trichopoda HOM05D000366 ORTHO05D000437 6.8e-13 79.3 73 50.7
Lj1C832G6 Lonicera japonica HOM05D000366 ORTHO05D000437 8.9e-13 79.0 78 47.4
PSO782G5571 Papaver somniferum HOM05D000366 ORTHO05D000437 8.9e-13 79.0 71 50.7
RcHm_v2.0_Chr5g0031311 Rosa chinensis HOM05D000366 ORTHO05D000437 8.9e-13 79.0 71 49.3
DCAR_019593 Daucus carota HOM05D000366 ORTHO05D000437 1.2e-12 78.6 82 42.7
Prupe.4G167700 Prunus persica HOM05D000366 ORTHO05D000437 1.2e-12 78.6 71 52.1
ClCG11G017540 Citrullus lanatus HOM05D000366 ORTHO05D000437 2.0e-12 77.8 70 50.0
CsaV3_4G033210 Cucumis sativus L. HOM05D000366 ORTHO05D000437 2.0e-12 77.8 71 47.9
SalBow7G4451 Salvia bowleyana HOM05D000366 ORTHO05D000437 2.0e-12 77.8 71 47.9
CAN.G162.14 Capsicum annuum HOM05D000366 ORTHO05D000437 2.6e-12 77.4 71 52.1
MELO3C025632.2 Cucumis melo HOM05D000366 ORTHO05D000437 2.6e-12 77.4 71 47.9
ECA234G4406 Erigeron canadensis HOM05D000366 ORTHO05D000437 3.4e-12 77.0 71 49.3
Sed0008083 Sechium edule HOM05D000366 ORTHO05D000437 5.8e-12 76.3 71 47.9
Gohir.A11G287200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 7.6e-12 75.9 69 49.3
Gohir.D11G305900 Gossypium hirsutum HOM05D000366 ORTHO05D000437 7.6e-12 75.9 69 49.3
Gorai.007G326300 Gossypium raimondii HOM05D000366 ORTHO05D000437 7.6e-12 75.9 69 49.3
ECA240G0457 Erigeron canadensis HOM05D000366 ORTHO05D000437 9.9e-12 75.5 70 45.7
Atru.chr2.2204 Acer truncatum HOM05D000366 ORTHO05D000437 1.3e-11 75.1 71 46.5
unitig_749.g13537 Utricularia gibba HOM05D000366 ORTHO05D000437 1.3e-11 75.1 68 45.6
CANSAT35G0453 Cannabis sativa HOM05D000366 ORTHO05D000437 1.7e-11 74.7 71 49.3
MD11G1260600 Malus domestica HOM05D000366 ORTHO05D000437 8.4e-11 72.4 68 47.1
PGR083G2734 Punica granatum HOM05D000366 ORTHO05D000437 8.4e-11 72.4 70 47.1
Cc05_g11270 Coffea canephora HOM05D000366 ORTHO05D000437 1.1e-10 72.0 71 40.8
Lj8C150G3 Lonicera japonica HOM05D000366 ORTHO05D000437 1.1e-10 72.0 78 46.2
Zm00001eb082620 Zea mays HOM05D000366 ORTHO05D000437 1.9e-10 71.2 71 42.3
Lsat_1_v5_gn_7_103320 Lactuca sativa HOM05D000366 ORTHO05D000437 2.4e-10 70.9 70 44.3
MD03G1241200 Malus domestica HOM05D000366 ORTHO05D000437 3.2e-10 70.5 68 45.6
Migut.N00775 Erythranthe guttata HOM05D000366 ORTHO05D000437 5.4e-10 69.7 74 39.2
HanXRQChr03g0079211 Helianthus annuus HOM05D000366 ORTHO05D000437 5.4e-10 69.7 70 42.9
Cc11_g03970 Coffea canephora HOM05D000366 ORTHO05D000437 9.2e-10 68.9 71 42.3
AUR62001624 Chenopodium quinoa HOM05D000366 ORTHO05D000437 2.1e-09 67.8 80 42.5
AUR62020153 Chenopodium quinoa HOM05D000366 ORTHO05D000437 2.1e-09 67.8 77 41.6
MBI07_g22391_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 2.1e-09 67.8 75 38.7
HPP92_009273 Vanilla planifolia HOM05D000366 ORTHO05D000437 2.7e-09 67.4 76 46.1
TWI39G0418 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 4.6e-09 66.6 70 42.9
Zm00001eb434470 Zea mays HOM05D000366 ORTHO05D000437 1.0e-08 65.5 72 43.1
Sp3g13180 Schrenkiella parvula HOM05D000366 ORTHO05D000437 1.3e-08 65.1 71 40.8
VMungo0540G1355 Vigna mungo HOM05D000366 ORTHO05D000437 2.3e-08 64.3 120 30.8
PSO017G6697 Papaver somniferum HOM05D000366 ORTHO05D000437 3.9e-08 63.5 80 37.5
PSO478G0388 Papaver somniferum HOM05D000366 ORTHO05D000437 3.9e-08 63.5 80 37.5
Cpa.g.sc2.437 Carica papaya HOM05D000366 ORTHO05D000437 5.1e-08 63.2 82 36.6
VMungo0647G2119 Vigna mungo HOM05D000366 ORTHO05D000437 5.1e-08 63.2 80 37.5
EL10Ac7g16192 Beta vulgaris HOM05D000366 ORTHO05D000437 6.6e-08 62.8 75 37.3
Sopen06g033450 Solanum pennellii HOM05D000366 ORTHO05D000437 6.6e-08 62.8 75 40.0
Cpa.g.sc142.23 Carica papaya HOM05D000366 ORTHO05D000437 1.1e-07 62.0 74 39.2
Phvul.006G069100 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 1.1e-07 62.0 71 36.6
THA.LOC104805694 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 1.5e-07 61.6 70 41.4
PGR102G2158 Punica granatum HOM05D000366 ORTHO05D000437 1.9e-07 61.2 75 38.7
TWI38G2315 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 1.9e-07 61.2 70 38.6
BcaC02g09525 Brassica carinata HOM05D000366 ORTHO05D000437 3.3e-07 60.5 70 40.0
C04p43740 Brassica napus HOM05D000366 ORTHO05D000437 3.3e-07 60.5 70 40.0
SGA_v2.0_scaffold120G32900 Striga asiatica HOM05D000366 ORTHO05D000437 3.3e-07 60.5 71 33.8
SMO118G0351 Selaginella moellendorffii HOM05D000366 ORTHO05D000437 4.3e-07 60.1 75 38.7
CiPaw.14G057900 Carya illinoinensis HOM05D000366 ORTHO05D000437 7.3e-07 59.3 86 34.9
Phvul.008G260100 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 7.3e-07 59.3 71 33.8
A04p10260 Brassica napus HOM05D000366 ORTHO05D000437 9.6e-07 58.9 71 39.4
LjContig00141g0006273 Lotus japonicus HOM05D000366 ORTHO05D000437 9.6e-07 58.9 71 33.8
MSTRG.22649 Avicennia marina HOM05D000366 ORTHO05D000437 1.2e-06 58.5 73 38.4
Psat2g057000 Pisum sativum HOM05D000366 ORTHO05D000437 1.6e-06 58.2 82 36.6
Prupe.1G423000 Prunus persica HOM05D000366 ORTHO05D000437 1.6e-06 58.2 79 38.0
Ca_26261_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 2.1e-06 57.8 80 33.8
MD13G1192700 Malus domestica HOM05D000366 ORTHO05D000437 2.8e-06 57.4 72 43.1
TWI38G1493 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 2.8e-06 57.4 71 39.4
TWI53G1696 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 2.8e-06 57.4 70 40.0
SGA_v2.0_scaffold144G35867 Striga asiatica HOM05D000366 ORTHO05D000437 3.6e-06 57.0 73 32.9
Thhalv10003533m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 4.7e-06 56.6 72 36.1
Lj6g0002719 Lotus japonicus HOM05D000366 ORTHO05D000437 4.7e-06 56.6 71 35.2


User provided reference genes

Program Settings