Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0213 Ceratophyllum demersum HOM05D003504 ORTHO05D004006 3.6e-82 308.1 150 100.0
CDE08G0995 Ceratophyllum demersum HOM05D003504 ORTHO05D004006 6.0e-45 184.5 146 65.1
MBI19_g24061_MAGBIO Magnolia biondii HOM05D003504 ORTHO05D004006 1.0e-44 183.7 91 91.2
TAR376G1097 Trochodendron aralioides HOM05D003504 ORTHO05D004006 1.7e-44 183.0 91 93.4
Aqoxy3G00583 Aquilegia oxysepala HOM05D003504 ORTHO05D004006 2.3e-44 182.6 91 92.3
Nitab4.5_0000348g0160 Nicotiana tabacum HOM05D003504 ORTHO05D004006 3.0e-44 182.2 91 91.2
Peaxi162Scf01205g00192 Petunia axillaris HOM05D003504 ORTHO05D004006 3.0e-44 182.2 91 91.2
Solyc08g016060.1 Solanum lycopersicum HOM05D003504 ORTHO05D004006 3.0e-44 182.2 91 91.2
Sopen08g006320 Solanum pennellii HOM05D003504 ORTHO05D004006 3.0e-44 182.2 91 91.2
CiPaw.11G060700 Carya illinoinensis HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 92.3
Dinv42441 Davidia involucrata HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 92.3
PSO541G5947 Papaver somniferum HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 93.4
PSO675G8441 Papaver somniferum HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 93.4
Potri.011G024000 Populus trichocarpa HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 92.3
Sabra11G0015000 Salix brachista HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 92.3
Zm00001eb015660 Zea mays HOM05D003504 ORTHO05D004006 3.9e-44 181.8 91 92.3
TWI60G1460 Tripterygium wilfordii HOM05D003504 ORTHO05D004006 5.1e-44 181.4 91 91.2
ATR0068G076 Amborella trichopoda HOM05D003504 ORTHO05D004006 8.7e-44 180.6 91 91.2
CsaV3_7G022910 Cucumis sativus L. HOM05D003504 ORTHO05D004006 8.7e-44 180.6 91 91.2
GSVIVG01014992001 Vitis vinifera HOM05D003504 ORTHO05D004006 8.7e-44 180.6 91 91.2
Zm00001eb395310 Zea mays HOM05D003504 ORTHO05D004006 8.7e-44 180.6 91 91.2
CAN.G68.16 Capsicum annuum HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 90.1
Ca_24184_v3 Cicer arietinum L. HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
FvH4_3g14770 Fragaria vesca HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
FAN11G1602 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
FAN21G0765 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
FAN25G3182 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
Lj3g0024547 Lotus japonicus HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
Medtr8g056900 Medicago truncatula HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
Nn1g07198 Nelumbo nucifera HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 89.0
RcHm_v2.0_Chr5g0024301 Rosa chinensis HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 91.2
unitig_60.g25589 Utricularia gibba HOM05D003504 ORTHO05D004006 1.1e-43 180.3 91 89.0
arahy.Tifrunner.gnm1.ann1.G058EZ Arachis hypogaea HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 90.1
arahy.Tifrunner.gnm1.ann1.S8BAEK Arachis hypogaea HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 90.1
Dinv25490 Davidia involucrata HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 90.1
FAN16G2874 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 90.1
PGR044G0024 Punica granatum HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 90.1
QL04p084696 Quercus lobata HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 91.2
TAR623G0212 Trochodendron aralioides HOM05D003504 ORTHO05D004006 1.5e-43 179.9 91 91.2
MD05G1229900 Malus domestica HOM05D003504 ORTHO05D004006 1.9e-43 179.5 91 91.2
MD10G1209700 Malus domestica HOM05D003504 ORTHO05D004006 1.9e-43 179.5 91 91.2
Prupe.4G132800 Prunus persica HOM05D003504 ORTHO05D004006 1.9e-43 179.5 91 91.2
Sed0010866 Sechium edule HOM05D003504 ORTHO05D004006 1.9e-43 179.5 91 89.0
Cc03_g16320 Coffea canephora HOM05D003504 ORTHO05D004006 2.5e-43 179.1 91 89.0
Glyma.15G212800 Glycine max HOM05D003504 ORTHO05D004006 2.5e-43 179.1 91 90.1
Thecc.02G366300 Theobroma cacao HOM05D003504 ORTHO05D004006 2.5e-43 179.1 91 90.1
ECA246G2710 Erigeron canadensis HOM05D003504 ORTHO05D004006 3.3e-43 178.7 91 90.1
Glyma.08G148300 Glycine max HOM05D003504 ORTHO05D004006 3.3e-43 178.7 91 89.0
HanXRQChr17g0541121 Helianthus annuus HOM05D003504 ORTHO05D004006 3.3e-43 178.7 91 90.1
Rhsim09G0069300 Rhododendron simsii HOM05D003504 ORTHO05D004006 3.3e-43 178.7 91 89.0
COL.COLO4_11259 Corchorus olitorius HOM05D003504 ORTHO05D004006 4.3e-43 178.3 91 90.1
Migut.H02557 Erythranthe guttata HOM05D003504 ORTHO05D004006 4.3e-43 178.3 91 89.0
Eucgr.K02348 Eucalyptus grandis HOM05D003504 ORTHO05D004006 4.3e-43 178.3 91 89.0
Psat4g137560 Pisum sativum HOM05D003504 ORTHO05D004006 4.3e-43 178.3 90 91.1
TPR.G9397 Trifolium pratense HOM05D003504 ORTHO05D004006 4.3e-43 178.3 91 90.1
Gohir.A12G174251 Gossypium hirsutum HOM05D003504 ORTHO05D004006 5.6e-43 177.9 91 90.1
Gohir.D12G176932 Gossypium hirsutum HOM05D003504 ORTHO05D004006 5.6e-43 177.9 91 90.1
Gorai.008G189300 Gossypium raimondii HOM05D003504 ORTHO05D004006 5.6e-43 177.9 91 90.1
Manes.17G018400 Manihot esculenta HOM05D003504 ORTHO05D004006 7.3e-43 177.6 91 89.0
Lsat_1_v5_gn_3_34601 Lactuca sativa HOM05D003504 ORTHO05D004006 9.6e-43 177.2 91 89.0
Lj3C843G5 Lonicera japonica HOM05D003504 ORTHO05D004006 9.6e-43 177.2 91 89.0
Lalb_Chr19g0133201 Lupinus albus HOM05D003504 ORTHO05D004006 9.6e-43 177.2 91 87.9
Phvul.011G177600 Phaseolus vulgaris HOM05D003504 ORTHO05D004006 9.6e-43 177.2 91 90.1
VMungo1127G1360 Vigna mungo HOM05D003504 ORTHO05D004006 9.6e-43 177.2 91 90.1
DCAR_001249 Daucus carota HOM05D003504 ORTHO05D004006 1.3e-42 176.8 91 89.0
Ciclev10010893m.g Citrus clementina HOM05D003504 ORTHO05D004006 1.6e-42 176.4 91 87.9
HanXRQChr06g0171691 Helianthus annuus HOM05D003504 ORTHO05D004006 1.6e-42 176.4 91 89.0
Lalb_Chr01g0007231 Lupinus albus HOM05D003504 ORTHO05D004006 1.6e-42 176.4 91 87.9
vmacro15991 Vaccinium macrocarpon HOM05D003504 ORTHO05D004006 1.6e-42 176.4 97 82.5
Ah.15g092010 Amaranthus hybridus HOM05D003504 ORTHO05D004006 2.1e-42 176.0 91 86.8
SGA_v2.0_scaffold161G37832 Striga asiatica HOM05D003504 ORTHO05D004006 2.1e-42 176.0 91 86.8
CANSAT80G2607 Cannabis sativa HOM05D003504 ORTHO05D004006 2.8e-42 175.6 91 89.0
MSTRG.21739 Avicennia marina HOM05D003504 ORTHO05D004006 3.6e-42 175.3 91 86.8
EL10Ac7g17310 Beta vulgaris HOM05D003504 ORTHO05D004006 3.6e-42 175.3 90 87.8
Haze_07798 Corylus avellana HOM05D003504 ORTHO05D004006 3.6e-42 175.3 91 89.0
Duzib251G0447 Durio zibethinus HOM05D003504 ORTHO05D004006 3.6e-42 175.3 91 89.0
SalBow1G2205 Salvia bowleyana HOM05D003504 ORTHO05D004006 3.6e-42 175.3 91 87.9
Cfa019400 Carpinus fangiana HOM05D003504 ORTHO05D004006 4.8e-42 174.9 91 87.9
AUR62022352 Chenopodium quinoa HOM05D003504 ORTHO05D004006 4.8e-42 174.9 91 85.7
AUR62034357 Chenopodium quinoa HOM05D003504 ORTHO05D004006 4.8e-42 174.9 91 85.7
Sc15g0007400 Simmondsia chinensis HOM05D003504 ORTHO05D004006 6.2e-42 174.5 91 84.6
SEGI_34400 Sequoiadendron giganteum HOM05D003504 ORTHO05D004006 8.1e-42 174.1 90 86.7
Atru.chr8.1046 Acer truncatum HOM05D003504 ORTHO05D004006 1.4e-41 173.3 91 87.9
Actinidia04335 Actinidia chinensis HOM05D003504 ORTHO05D004006 1.4e-41 173.3 91 85.7
Hund01269 Selenicereus undatus HOM05D003504 ORTHO05D004006 4.0e-41 171.8 91 83.5
HPP92_006681 Vanilla planifolia HOM05D003504 ORTHO05D004006 4.0e-41 171.8 91 85.7
Aa31LG2G12370 Aethionema arabicum HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
AL7G38710 Arabidopsis lyrata HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
AT4G16340 Arabidopsis thaliana HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
Carub.0007s2520 Capsella rubella HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
CARHR222710 Cardamine hirsuta HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
Thhalv10024194m.g Eutrema salsugineum HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
Nitab4.5_0001070g0090 Nicotiana tabacum HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
Sp7g14850 Schrenkiella parvula HOM05D003504 ORTHO05D004006 2.0e-40 169.5 91 86.8
BcaC09g50329 Brassica carinata HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 86.8
BcaNung00207 Brassica carinata HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 86.8
A01p21260 Brassica napus HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 86.8
C01p26570 Brassica napus HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 86.8
BolC1t02600H Brassica oleracea HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 86.8
BraA01t02033Z Brassica rapa HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 86.8
ClCG09G022710 Citrullus lanatus HOM05D003504 ORTHO05D004006 2.6e-40 169.1 91 87.9
Mapoly0021s0072 Marchantia polymorpha HOM05D003504 ORTHO05D004006 2.6e-40 169.1 90 83.3
THA.LOC104823022 Tarenaya hassleriana HOM05D003504 ORTHO05D004006 5.8e-40 167.9 91 83.5
AagrBONN_evm.TU.Sc2ySwM_228.1501 Anthoceros agrestis HOM05D003504 ORTHO05D004006 1.1e-38 163.7 90 77.8
SMO011G0025 Selaginella moellendorffii HOM05D003504 ORTHO05D004006 1.1e-38 163.7 89 79.8
Pp3c9_15160 Physcomitrium patens HOM05D003504 ORTHO05D004006 3.5e-37 158.7 90 76.7
Pp3c1_25190 Physcomitrium patens HOM05D003504 ORTHO05D004006 8.7e-36 154.1 91 72.5
Pp3c15_8680 Physcomitrium patens HOM05D003504 ORTHO05D004006 2.5e-35 152.5 90 72.2
Pp3c4_25310 Physcomitrium patens HOM05D003504 ORTHO05D004006 4.3e-35 151.8 90 77.8
CBR_g22314 Chara braunii HOM05D003504 ORTHO05D004006 2.8e-34 149.1 88 75.0
CANSAT80G1492 Cannabis sativa HOM05D003504 ORTHO05D004006 4.8e-34 148.3 90 77.8
Pp3c3_15370 Physcomitrium patens HOM05D003504 ORTHO05D004006 4.8e-34 148.3 90 74.4
Pp3c10_16640 Physcomitrium patens HOM05D003504 ORTHO05D004006 1.4e-33 146.7 90 73.3
Peaxi162Scf00280g00008 Petunia axillaris HOM05D003504 ORTHO05D004006 1.0e-20 104.0 74 70.3
MELO3C012607.2 Cucumis melo HOM05D003504 ORTHO05D004006 6.3e-18 94.7 50 88.0
Oeu038381.1 Olea europaea HOM05D003504 ORTHO05D004006 6.3e-18 94.7 48 91.7
QL04p085078 Quercus lobata HOM05D003504 ORTHO05D004006 6.9e-17 91.3 56 71.4
CSS0025770 Camellia sinensis var. sinensis HOM05D003504 ORTHO05D004006 3.4e-16 89.0 43 88.4
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 1.8e-12 76.6 45 77.8
Lj6A705G41 Lonicera japonica HOM05D003504 ORTHO05D004006 1.8e-12 76.6 48 70.8
Gohir.A12G174201 Gossypium hirsutum HOM05D003504 ORTHO05D004006 3.3e-11 72.4 40 80.0


User provided reference genes

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