Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1698 Ceratophyllum demersum HOM05D004262 ORTHO05D128839 6.3e-151 537.3 260 100.0
CDE06G2757 Ceratophyllum demersum HOM05D004262 ORTHO05D004886 7.7e-32 141.7 84 77.4
Nn5g28756 Nelumbo nucifera HOM05D004262 ORTHO05D004886 6.6e-15 85.5 85 47.1
TAR625G1293 Trochodendron aralioides HOM05D004262 ORTHO05D004886 9.5e-14 81.6 85 44.7
TAR250G0005 Trochodendron aralioides HOM05D004262 ORTHO05D004886 1.2e-13 81.3 85 44.7
TAR381G1254 Trochodendron aralioides HOM05D004262 ORTHO05D004886 1.2e-13 81.3 85 44.7
CSS0008059 Camellia sinensis var. sinensis HOM05D004262 ORTHO05D004886 2.1e-13 80.5 85 43.5
Solyc11g005440.2 Solanum lycopersicum HOM05D004262 ORTHO05D004886 6.2e-13 79.0 85 47.1
Sopen11g001450 Solanum pennellii HOM05D004262 ORTHO05D004886 8.0e-13 78.6 85 47.1
PGSC0003DMG400003967 Solanum tuberosum HOM05D004262 ORTHO05D004886 1.1e-12 78.2 85 45.9
vmacro12820 Vaccinium macrocarpon HOM05D004262 ORTHO05D004886 3.1e-12 76.6 85 45.9
GSVIVG01026616001 Vitis vinifera HOM05D004262 ORTHO05D004886 8.9e-12 75.1 85 43.5
Rhsim10G0142400 Rhododendron simsii HOM05D004262 ORTHO05D004886 1.2e-11 74.7 85 42.4
ATR0820G094 Amborella trichopoda HOM05D004262 ORTHO05D004886 1.5e-11 74.3 80 43.8
Lj4C857T4 Lonicera japonica HOM05D004262 ORTHO05D004886 1.5e-11 74.3 78 43.6
Dinv12126 Davidia involucrata HOM05D004262 ORTHO05D004886 2.0e-11 73.9 79 43.0
Potri.019G004000 Populus trichocarpa HOM05D004262 ORTHO05D004886 2.0e-11 73.9 116 43.1
Nitab4.5_0001582g0040 Nicotiana tabacum HOM05D004262 ORTHO05D004886 3.4e-11 73.2 85 42.4
Cpa.g.sc72.29 Carica papaya HOM05D004262 ORTHO05D004886 5.8e-11 72.4 79 43.0
Migut.H02473 Erythranthe guttata HOM05D004262 ORTHO05D004886 5.8e-11 72.4 95 41.1
Nitab4.5_0004021g0030 Nicotiana tabacum HOM05D004262 ORTHO05D004886 5.8e-11 72.4 85 42.4
MSTRG.23288 Avicennia marina HOM05D004262 ORTHO05D004886 7.5e-11 72.0 79 45.6
CiPaw.04G087100 Carya illinoinensis HOM05D004262 ORTHO05D004886 7.5e-11 72.0 94 43.6
Cc07_g17550 Coffea canephora HOM05D004262 ORTHO05D004886 7.5e-11 72.0 95 42.1
CAN.G516.2 Capsicum annuum HOM05D004262 ORTHO05D004886 9.8e-11 71.6 97 43.3
PGR119G1219 Punica granatum HOM05D004262 ORTHO05D004886 1.3e-10 71.2 95 42.1
Gohir.D11G226360 Gossypium hirsutum HOM05D004262 ORTHO05D004886 1.7e-10 70.9 79 41.8
Gorai.002G150600 Gossypium raimondii HOM05D004262 ORTHO05D004886 1.7e-10 70.9 79 41.8
SalBow8G4827 Salvia bowleyana HOM05D004262 ORTHO05D004886 2.2e-10 70.5 102 44.1
HPP92_002646 Vanilla planifolia HOM05D004262 ORTHO05D004886 3.7e-10 69.7 79 43.0
Peaxi162Scf00025g02620 Petunia axillaris HOM05D004262 ORTHO05D004886 4.9e-10 69.3 85 38.8
Oeu002630.1 Olea europaea HOM05D004262 ORTHO05D004886 1.1e-09 68.2 88 40.9
Gohir.A11G223950 Gossypium hirsutum HOM05D004262 ORTHO05D004886 1.4e-09 67.8 79 40.5
TWI79G1577 Tripterygium wilfordii HOM05D004262 ORTHO05D004886 1.4e-09 67.8 78 41.0
Dinv15095 Davidia involucrata HOM05D004262 ORTHO05D004886 1.9e-09 67.4 79 41.8
TWI31G0151 Tripterygium wilfordii HOM05D004262 ORTHO05D004886 1.9e-09 67.4 79 41.8
PSO675G0841 Papaver somniferum HOM05D004262 ORTHO05D004886 3.2e-09 66.6 78 42.3
Potri.001G307700 Populus trichocarpa HOM05D004262 ORTHO05D004886 3.2e-09 66.6 85 41.2
QL06p030897 Quercus lobata HOM05D004262 ORTHO05D004886 3.2e-09 66.6 85 40.0
Sabra16G0193600 Salix brachista HOM05D004262 ORTHO05D004886 3.2e-09 66.6 79 43.0
Hund03495 Selenicereus undatus HOM05D004262 ORTHO05D004886 3.2e-09 66.6 90 42.2
RcHm_v2.0_Chr2g0119261 Rosa chinensis HOM05D004262 ORTHO05D004886 4.1e-09 66.2 90 40.0
Sabra19G0004000 Salix brachista HOM05D004262 ORTHO05D004886 5.4e-09 65.9 116 40.5
Sabra19G0021500 Salix brachista HOM05D004262 ORTHO05D004886 5.4e-09 65.9 116 40.5
ClCG02G000740 Citrullus lanatus HOM05D004262 ORTHO05D004886 7.0e-09 65.5 83 44.6
Thecc.01G119500 Theobroma cacao HOM05D004262 ORTHO05D004886 7.0e-09 65.5 85 38.8
Os12g0162900 Oryza sativa ssp. japonica HOM05D004262 ORTHO05D004886 1.2e-08 64.7 79 43.0
EL10Ac6g15245 Beta vulgaris HOM05D004262 ORTHO05D004886 1.6e-08 64.3 84 38.1
Lj2A589G33 Lonicera japonica HOM05D004262 ORTHO05D004886 1.6e-08 64.3 85 41.2
Sed0013193 Sechium edule HOM05D004262 ORTHO05D004886 1.6e-08 64.3 79 44.3
Sed0020078 Sechium edule HOM05D004262 ORTHO05D004886 1.6e-08 64.3 41 65.9
Sc16g0004000 Simmondsia chinensis HOM05D004262 ORTHO05D004886 1.6e-08 64.3 90 36.7
SHI11519 Sapria himalayana HOM05D004262 ORTHO05D004886 2.7e-08 63.5 86 39.5
Ah.02g122290 Amaranthus hybridus HOM05D004262 ORTHO05D004886 4.6e-08 62.8 109 33.9
Ciclev10024792m.g Citrus clementina HOM05D004262 ORTHO05D004886 4.6e-08 62.8 79 40.5
Lsat_1_v5_gn_5_101740 Lactuca sativa HOM05D004262 ORTHO05D004886 4.6e-08 62.8 85 37.6
Aa31LG1G17200 Aethionema arabicum HOM05D004262 ORTHO05D004886 1.0e-07 61.6 75 46.7
CANSAT01G2046 Cannabis sativa HOM05D004262 ORTHO05D004886 1.0e-07 61.6 73 41.1
Eucgr.I00260 Eucalyptus grandis HOM05D004262 ORTHO05D004886 1.0e-07 61.6 60 53.3
Actinidia09812 Actinidia chinensis HOM05D004262 ORTHO05D004886 1.7e-07 60.8 79 38.0
FvH4_1g23660 Fragaria vesca HOM05D004262 ORTHO05D004886 1.7e-07 60.8 96 37.5
FAN19G0674 Fragaria x ananassa HOM05D004262 ORTHO05D004886 1.7e-07 60.8 96 37.5
FAN26G0764 Fragaria x ananassa HOM05D004262 ORTHO05D004886 1.7e-07 60.8 96 37.5
THA.LOC104818467 Tarenaya hassleriana HOM05D004262 ORTHO05D004886 1.7e-07 60.8 105 40.0
Prupe.7G207600 Prunus persica HOM05D004262 ORTHO05D004886 2.3e-07 60.5 85 36.5
Sp6g33570 Schrenkiella parvula HOM05D004262 ORTHO05D004886 2.3e-07 60.5 98 37.8
arahy.Tifrunner.gnm1.ann1.3RI1TB Arachis hypogaea HOM05D004262 ORTHO05D004886 3.0e-07 60.1 85 37.6
arahy.Tifrunner.gnm1.ann1.H08UBS Arachis hypogaea HOM05D004262 ORTHO05D004886 3.0e-07 60.1 85 37.6
DCAR_014352 Daucus carota HOM05D004262 ORTHO05D004886 3.0e-07 60.1 79 39.2
Duzib187G1764 Durio zibethinus HOM05D004262 ORTHO05D004886 3.0e-07 60.1 72 40.3
MD01G1017000 Malus domestica HOM05D004262 ORTHO05D004886 3.0e-07 60.1 69 42.0
Hund19612 Selenicereus undatus HOM05D004262 ORTHO05D004886 3.9e-07 59.7 84 34.5
HanXRQChr10g0296711 Helianthus annuus HOM05D004262 ORTHO05D004886 5.0e-07 59.3 78 39.7
Duzib147G0824 Durio zibethinus HOM05D004262 ORTHO05D004886 6.6e-07 58.9 103 36.9
FAN28G2830 Fragaria x ananassa HOM05D004262 ORTHO05D004886 6.6e-07 58.9 96 36.5
Carub.0006s0826 Capsella rubella HOM05D004262 ORTHO05D004886 8.6e-07 58.5 89 41.6
Thhalv10012635m.g Eutrema salsugineum HOM05D004262 ORTHO05D004886 8.6e-07 58.5 94 37.2
CARHR203550 Cardamine hirsuta HOM05D004262 ORTHO05D004886 1.1e-06 58.2 87 39.1
COL.COLO4_22393 Corchorus olitorius HOM05D000258 ORTHO05D000153 1.9e-06 57.4 79 39.2
ECA234G3594 Erigeron canadensis HOM05D004262 ORTHO05D004886 1.9e-06 57.4 89 34.8
FAN23G1672 Fragaria x ananassa HOM05D004262 ORTHO05D004886 1.9e-06 57.4 96 36.5
AT5G09840 Arabidopsis thaliana HOM05D004262 ORTHO05D004886 3.3e-06 56.6 137 37.2
AT5G64710 Arabidopsis thaliana HOM05D004262 ORTHO05D004886 3.3e-06 56.6 97 35.1
Manes.13G082100 Manihot esculenta HOM05D004262 ORTHO05D004886 5.6e-06 55.8 41 53.7
BcaB07g29753 Brassica carinata HOM05D004262 ORTHO05D004886 7.3e-06 55.5 41 56.1
Lalb_Chr08g0238681 Lupinus albus HOM05D004262 ORTHO05D004886 7.3e-06 55.5 61 44.3
BcaC03g18272 Brassica carinata HOM05D004262 ORTHO05D004886 9.5e-06 55.1 65 43.1
C02p63520 Brassica napus HOM05D004262 ORTHO05D004886 9.5e-06 55.1 65 43.1
BolC2t12417H Brassica oleracea HOM05D004262 ORTHO05D004886 9.5e-06 55.1 65 43.1
SGA_v2.0_scaffold2G01256 Striga asiatica HOM05D004262 ORTHO05D004886 9.5e-06 55.1 83 36.1
THA.LOC104799402 Tarenaya hassleriana HOM05D004262 ORTHO05D004886 9.5e-06 55.1 95 37.9


User provided reference genes

Program Settings