Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1262 Ceratophyllum demersum HOM05D003128 ORTHO05D004333 2.8e-42 174.9 87 100.0
CDE06G1969 Ceratophyllum demersum HOM05D003128 ORTHO05D004333 1.8e-33 145.6 79 93.7
Dinv19469 Davidia involucrata HOM05D003128 ORTHO05D004333 8.6e-20 100.1 79 57.0
Nn3g18602 Nelumbo nucifera HOM05D003128 ORTHO05D004333 1.9e-19 99.0 79 55.7
Manes.12G143800 Manihot esculenta HOM05D003128 ORTHO05D004333 2.5e-19 98.6 79 57.0
CiPaw.04G090100 Carya illinoinensis HOM05D003128 ORTHO05D004333 7.3e-19 97.1 79 53.2
PGR102G2018 Punica granatum HOM05D003128 ORTHO05D004333 1.2e-18 96.3 78 55.1
TAR376G0247 Trochodendron aralioides HOM05D003128 ORTHO05D004333 1.6e-18 95.9 79 51.9
TAR633G2583 Trochodendron aralioides HOM05D003128 ORTHO05D004333 1.6e-18 95.9 83 49.4
Actinidia12215 Actinidia chinensis HOM05D003128 ORTHO05D004333 2.1e-18 95.5 78 56.4
PSO675G2461 Papaver somniferum HOM05D003128 ORTHO05D004333 3.6e-18 94.7 75 57.3
Cc07_g16450 Coffea canephora HOM05D003128 ORTHO05D004333 4.7e-18 94.4 79 51.9
Cfa002768 Carpinus fangiana HOM05D003128 ORTHO05D004333 6.2e-18 94.0 79 53.2
QL06p031715 Quercus lobata HOM05D003128 ORTHO05D004333 6.2e-18 94.0 79 53.2
ATR1120G197 Amborella trichopoda HOM05D003128 ORTHO05D004333 1.1e-17 93.2 80 55.0
Aqoxy6G00440 Aquilegia oxysepala HOM05D003128 ORTHO05D004333 1.4e-17 92.8 79 49.4
GSVIVG01022250001 Vitis vinifera HOM05D003128 ORTHO05D004333 1.4e-17 92.8 79 50.6
arahy.Tifrunner.gnm1.ann1.31C5CF Arachis hypogaea HOM05D003128 ORTHO05D004333 4.0e-17 91.3 81 51.9
Duzib147G1643 Durio zibethinus HOM05D003128 ORTHO05D004333 4.0e-17 91.3 78 52.6
PSO541G0298 Papaver somniferum HOM05D003128 ORTHO05D004333 5.2e-17 90.9 75 54.7
Haze_25061 Corylus avellana HOM05D003128 ORTHO05D004333 6.8e-17 90.5 79 50.6
Eucgr.H04882 Eucalyptus grandis HOM05D003128 ORTHO05D004333 8.9e-17 90.1 79 50.6
Gohir.D12G093500 Gossypium hirsutum HOM05D003128 ORTHO05D004333 1.5e-16 89.4 78 52.6
Gorai.008G101500 Gossypium raimondii HOM05D003128 ORTHO05D004333 1.5e-16 89.4 78 52.6
PSO017G2724 Papaver somniferum HOM05D003128 ORTHO05D004333 1.5e-16 89.4 75 56.0
Nitab4.5_0000184g0230 Nicotiana tabacum HOM05D003128 ORTHO05D004333 2.0e-16 89.0 79 53.2
TPR.G2212 Trifolium pratense HOM05D003128 ORTHO05D004333 2.0e-16 89.0 76 51.3
MSTRG.15756 Avicennia marina HOM05D003128 ORTHO05D004333 3.4e-16 88.2 79 48.1
Peaxi162Scf00106g01318 Petunia axillaris HOM05D003128 ORTHO05D004333 3.4e-16 88.2 79 46.8
THA.LOC104819600 Tarenaya hassleriana HOM05D003128 ORTHO05D004333 3.4e-16 88.2 79 48.1
CSS0009858 Camellia sinensis var. sinensis HOM05D003128 ORTHO05D004333 4.4e-16 87.8 79 48.1
CSS0050242 Camellia sinensis var. sinensis HOM05D003128 ORTHO05D004333 4.4e-16 87.8 79 48.1
CsaV3_6G042250 Cucumis sativus L. HOM05D003128 ORTHO05D004333 5.8e-16 87.4 78 51.3
Nitab4.5_0003588g0040 Nicotiana tabacum HOM05D003128 ORTHO05D004333 5.8e-16 87.4 79 49.4
Potri.005G085600 Populus trichocarpa HOM05D003128 ORTHO05D004333 5.8e-16 87.4 79 57.0
Sabra07G0066500 Salix brachista HOM05D003128 ORTHO05D004333 5.8e-16 87.4 77 51.9
Thecc.01G115300 Theobroma cacao HOM05D003128 ORTHO05D004333 7.6e-16 87.0 79 50.6
Prupe.6G169200 Prunus persica HOM05D003128 ORTHO05D004333 9.9e-16 86.7 79 51.9
SGA_v2.0_scaffold47G17695 Striga asiatica HOM05D003128 ORTHO05D004333 9.9e-16 86.7 78 52.6
COL.COLO4_10987 Corchorus olitorius HOM05D003128 ORTHO05D004333 1.3e-15 86.3 78 52.6
Migut.L00061 Erythranthe guttata HOM05D003128 ORTHO05D004333 2.2e-15 85.5 79 50.6
Gohir.A12G092500 Gossypium hirsutum HOM05D003128 ORTHO05D004333 2.2e-15 85.5 78 51.3
Carub.0001s0992 Capsella rubella HOM05D003128 ORTHO05D004333 2.9e-15 85.1 84 47.6
Ca_17686_v3 Cicer arietinum L. HOM05D003128 ORTHO05D004333 2.9e-15 85.1 78 50.0
Lj4g0009219 Lotus japonicus HOM05D003128 ORTHO05D004333 2.9e-15 85.1 78 51.3
Nitab4.5_0000110g0210 Nicotiana tabacum HOM05D003128 ORTHO05D004333 2.9e-15 85.1 79 49.4
Psat7g050400 Pisum sativum HOM05D003128 ORTHO05D004333 2.9e-15 85.1 76 48.7
Potri.007G079300 Populus trichocarpa HOM05D003128 ORTHO05D004333 2.9e-15 85.1 71 53.5
Glyma.13G362700 Glycine max HOM05D003128 ORTHO05D004333 3.8e-15 84.7 78 51.3
ClCG01G015970 Citrullus lanatus HOM05D003128 ORTHO05D004333 6.4e-15 84.0 81 49.4
Ciclev10024790m.g Citrus clementina HOM05D003128 ORTHO05D004333 8.4e-15 83.6 78 48.7
AT1G10490 Arabidopsis thaliana HOM05D003128 ORTHO05D004333 1.1e-14 83.2 84 46.4
CAN.G997.5 Capsicum annuum HOM05D003128 ORTHO05D004333 1.1e-14 83.2 80 48.8
unitig_37.g12839 Utricularia gibba HOM05D003128 ORTHO05D004333 1.1e-14 83.2 83 50.6
AL1G21290 Arabidopsis lyrata HOM05D003128 ORTHO05D004333 1.4e-14 82.8 84 46.4
TWI75G1035 Tripterygium wilfordii HOM05D003128 ORTHO05D004333 1.4e-14 82.8 79 45.6
HanXRQChr16g0513231 Helianthus annuus HOM05D003128 ORTHO05D004333 1.9e-14 82.4 79 45.6
Sed0019648 Sechium edule HOM05D003128 ORTHO05D004333 1.9e-14 82.4 79 48.1
Solyc04g051670.3 Solanum lycopersicum HOM05D003128 ORTHO05D004333 1.9e-14 82.4 80 48.8
Sopen04g023030 Solanum pennellii HOM05D003128 ORTHO05D004333 1.9e-14 82.4 80 48.8
CSS0015093 Camellia sinensis var. sinensis HOM05D003128 ORTHO05D004333 2.4e-14 82.0 74 45.9
MD10G1028600 Malus domestica HOM05D003128 ORTHO05D004333 2.4e-14 82.0 79 46.8
Lsat_1_v5_gn_8_13041 Lactuca sativa HOM05D003128 ORTHO05D004333 3.2e-14 81.6 79 45.6
SalBow5G4213 Salvia bowleyana HOM05D003128 ORTHO05D004333 3.2e-14 81.6 79 53.2
Atru.chr4.452 Acer truncatum HOM05D003128 ORTHO05D004333 5.4e-14 80.9 76 48.7
Ah.03g141630 Amaranthus hybridus HOM05D003128 ORTHO05D004333 5.4e-14 80.9 80 47.5
CARHR010630 Cardamine hirsuta HOM05D003128 ORTHO05D004333 5.4e-14 80.9 84 45.2
Nitab4.5_0001532g0050 Nicotiana tabacum HOM05D003128 ORTHO05D004333 5.4e-14 80.9 79 48.1
Phvul.002G265804 Phaseolus vulgaris HOM05D003128 ORTHO05D004333 5.4e-14 80.9 76 50.0
SEGI_30432 Sequoiadendron giganteum HOM05D003128 ORTHO05D004333 9.2e-14 80.1 78 47.4
ECA238G0109 Erigeron canadensis HOM05D003128 ORTHO05D004333 2.1e-13 79.0 79 44.3
Glyma.08G143000 Glycine max HOM05D003128 ORTHO05D004333 2.1e-13 79.0 71 52.1
MD05G1028000 Malus domestica HOM05D003128 ORTHO05D004333 2.1e-13 79.0 79 45.6
Rhsim08G0005200 Rhododendron simsii HOM05D003128 ORTHO05D004333 4.6e-13 77.8 79 48.1
SalBow5G3190 Salvia bowleyana HOM05D003128 ORTHO05D004333 4.6e-13 77.8 85 45.9
Sc07g0006790 Simmondsia chinensis HOM05D003128 ORTHO05D004333 4.6e-13 77.8 79 40.5
Lju50C14G5 Lonicera japonica HOM05D003128 ORTHO05D004333 6.0e-13 77.4 81 46.9
SalBow5G5535 Salvia bowleyana HOM05D003128 ORTHO05D004333 6.0e-13 77.4 85 45.9
Sp1g09120 Schrenkiella parvula HOM05D003128 ORTHO05D004333 7.8e-13 77.0 77 49.4
VMungo0251G0175 Vigna mungo HOM05D003128 ORTHO05D004333 7.8e-13 77.0 76 46.1
DCAR_001378 Daucus carota HOM05D003128 ORTHO05D004333 1.0e-12 76.6 82 47.6
RcHm_v2.0_Chr2g0117351 Rosa chinensis HOM05D003128 ORTHO05D004333 1.0e-12 76.6 86 44.2
Aa31LG2G10270 Aethionema arabicum HOM05D003128 ORTHO05D004333 1.3e-12 76.3 77 46.8
Thhalv10006661m.g Eutrema salsugineum HOM05D003128 ORTHO05D004333 1.3e-12 76.3 84 44.0
Glyma.05G185000 Glycine max HOM05D003128 ORTHO05D004333 1.7e-12 75.9 76 46.1
AUR62027168 Chenopodium quinoa HOM05D003128 ORTHO05D004333 2.3e-12 75.5 71 43.7
Hund19633 Selenicereus undatus HOM05D003128 ORTHO05D004333 2.3e-12 75.5 71 46.5
EL10Ac6g14775 Beta vulgaris HOM05D003128 ORTHO05D004333 3.0e-12 75.1 71 49.3
Medtr8g092060 Medicago truncatula HOM05D003128 ORTHO05D004333 3.0e-12 75.1 76 43.4
HPP92_008448 Vanilla planifolia HOM05D003128 ORTHO05D004333 3.0e-12 75.1 78 47.4
HPP92_027494 Vanilla planifolia HOM05D003128 ORTHO05D004333 3.0e-12 75.1 78 47.4
BcaC07g38567 Brassica carinata HOM05D003128 ORTHO05D004333 3.9e-12 74.7 77 48.1
FvH4_1g22910 Fragaria vesca HOM05D003128 ORTHO05D004333 3.9e-12 74.7 86 43.0
FAN19G0581 Fragaria x ananassa HOM05D003128 ORTHO05D004333 3.9e-12 74.7 86 43.0
FAN23G1907 Fragaria x ananassa HOM05D003128 ORTHO05D004333 3.9e-12 74.7 86 43.0
Cpa.g.c41200 Carica papaya HOM05D003128 ORTHO05D004333 8.7e-12 73.6 57 56.1
FAN26G0239 Fragaria x ananassa HOM05D003128 ORTHO05D004333 8.7e-12 73.6 86 41.9
Lalb_Chr12g0203461 Lupinus albus HOM05D003128 ORTHO05D004333 8.7e-12 73.6 78 44.9
SMO364G0954 Selaginella moellendorffii HOM05D003128 ORTHO05D004333 8.7e-12 73.6 78 41.0
Zm00001eb344750 Zea mays HOM05D003128 ORTHO05D004333 8.7e-12 73.6 73 50.7
A08p33940 Brassica napus HOM05D003128 ORTHO05D004333 1.1e-11 73.2 77 46.8
C08p13730 Brassica napus HOM05D003128 ORTHO05D004333 1.1e-11 73.2 77 46.8
BolC8t49008H Brassica oleracea HOM05D003128 ORTHO05D004333 1.1e-11 73.2 77 46.8
BraA08t35308Z Brassica rapa HOM05D003128 ORTHO05D004333 1.1e-11 73.2 77 46.8
AL5G39590 Arabidopsis lyrata HOM05D003128 ORTHO05D004333 1.5e-11 72.8 77 42.9
AUR62003293 Chenopodium quinoa HOM05D003128 ORTHO05D004333 1.9e-11 72.4 71 40.8
Mapoly0031s0153 Marchantia polymorpha HOM05D003128 ORTHO05D004333 1.9e-11 72.4 76 40.8
BcaC07g38605 Brassica carinata HOM05D003128 ORTHO05D004333 3.3e-11 71.6 77 45.5
Pp3c5_20530 Physcomitrium patens HOM05D003128 ORTHO05D004333 4.3e-11 71.2 77 42.9
Thhalv10005765m.g Eutrema salsugineum HOM05D003128 ORTHO05D004333 5.6e-11 70.9 78 46.2
Manes.01G261100 Manihot esculenta HOM05D003128 ORTHO05D004333 1.3e-10 69.7 83 34.9
C08p33490 Brassica napus HOM05D003128 ORTHO05D004333 1.6e-10 69.3 77 41.6
CARHR168240 Cardamine hirsuta HOM05D003128 ORTHO05D004333 1.6e-10 69.3 75 45.3
HPP92_027496 Vanilla planifolia HOM05D003128 ORTHO05D004333 1.6e-10 69.3 78 46.2
AT3G57940 Arabidopsis thaliana HOM05D003128 ORTHO05D004333 3.6e-10 68.2 78 42.3
Sp5g04780 Schrenkiella parvula HOM05D003128 ORTHO05D004333 3.6e-10 68.2 78 44.9
A09p50770 Brassica napus HOM05D003128 ORTHO05D004333 4.8e-10 67.8 77 40.3
HPP92_008449 Vanilla planifolia HOM05D003128 ORTHO05D004333 4.8e-10 67.8 78 44.9
Carub.0005s2478 Capsella rubella HOM05D003128 ORTHO05D004333 1.8e-09 65.9 84 38.1
Os12g0170700 Oryza sativa ssp. japonica HOM05D003128 ORTHO05D004333 1.8e-09 65.9 71 47.9
BraA09t40524Z Brassica rapa HOM05D003128 ORTHO05D004333 2.4e-09 65.5 78 41.0
Glyma.14G080000 Glycine max HOM05D003128 ORTHO05D004333 3.1e-09 65.1 83 42.2
SalBow1G7304 Salvia bowleyana HOM05D003128 ORTHO05D004333 3.1e-09 65.1 86 43.0
Medtr2g028030 Medicago truncatula HOM05D003128 ORTHO05D004333 4.0e-09 64.7 63 49.2
Cc02_g23680 Coffea canephora HOM05D003128 ORTHO05D004333 2.0e-08 62.4 80 32.5
vmacro18430 Vaccinium macrocarpon HOM05D003128 ORTHO05D004333 4.4e-08 61.2 51 51.0
CAN.G710.4 Capsicum annuum HOM05D003128 ORTHO05D004333 1.3e-07 59.7 51 52.9
CANSAT01G0023 Cannabis sativa HOM05D003128 ORTHO05D004333 2.2e-07 58.9 70 34.3
SHI11304 Sapria himalayana HOM05D003128 ORTHO05D004333 2.9e-07 58.5 71 35.2
EL10Ac8g20519 Beta vulgaris HOM05D003128 ORTHO05D004333 4.9e-07 57.8 68 36.8
C08p48830 Brassica napus HOM05D003128 ORTHO05D024111 8.4e-07 57.0 67 41.8
BcaC07g40165 Brassica carinata HOM05D003128 ORTHO05D004333 1.9e-06 55.8 86 33.7
Rhsim08G0031600 Rhododendron simsii HOM05D003128 ORTHO05D004333 1.9e-06 55.8 73 41.1


User provided reference genes

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