Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1215 Ceratophyllum demersum HOM05D006833 ORTHO05D006885 0.0e+00 1169.5 583 100.0
CDE06G0375 Ceratophyllum demersum HOM05D006833 ORTHO05D006885 1.4e-283 979.2 563 85.1
TAR381G0829 Trochodendron aralioides HOM05D006833 ORTHO05D006885 2.4e-97 360.5 610 37.5
MBI01_g32850_MAGBIO Magnolia biondii HOM05D006833 ORTHO05D006885 1.3e-92 344.7 629 38.8
Nn6g31535 Nelumbo nucifera HOM05D006833 ORTHO05D006885 2.3e-92 344.0 600 36.8
Cfa014175 Carpinus fangiana HOM05D006833 ORTHO05D006885 6.9e-89 332.4 552 37.0
Haze_22899 Corylus avellana HOM05D006833 ORTHO05D006885 4.2e-86 323.2 554 36.3
Atru.chr4.1658 Acer truncatum HOM05D006833 ORTHO05D006885 1.2e-85 321.6 561 37.6
Actinidia17104 Actinidia chinensis HOM05D006833 ORTHO05D006885 2.6e-83 313.9 535 37.6
Lj4A815T22 Lonicera japonica HOM05D006833 ORTHO05D006885 1.1e-81 308.5 585 35.0
vmacro13063 Vaccinium macrocarpon HOM05D006833 ORTHO05D006885 9.1e-81 305.4 592 35.8
Ciclev10000043m.g Citrus clementina HOM05D006833 ORTHO05D006885 1.5e-80 304.7 560 36.2
Hma1.2p1_0493F.1_g165130 Hydrangea macrophylla HOM05D006833 ORTHO05D006885 1.5e-80 304.7 566 36.6
QL02p016503 Quercus lobata HOM05D006833 ORTHO05D006885 4.5e-80 303.1 603 35.0
CiPaw.07G129500 Carya illinoinensis HOM05D006833 ORTHO05D006885 3.8e-79 300.1 611 33.9
GSVIVG01006875001 Vitis vinifera HOM05D006833 ORTHO05D006885 3.8e-79 300.1 558 35.5
Dinv35492 Davidia involucrata HOM05D006833 ORTHO05D006885 1.4e-78 298.1 600 34.3
Manes.05G113300 Manihot esculenta HOM05D006833 ORTHO05D006885 2.7e-77 293.9 648 35.6
Prupe.2G042400 Prunus persica HOM05D006833 ORTHO05D006885 1.8e-76 291.2 484 38.8
Dinv05521 Davidia involucrata HOM05D006833 ORTHO05D006885 6.7e-76 289.3 401 42.9
CSS0009542 Camellia sinensis var. sinensis HOM05D006833 ORTHO05D006885 2.6e-75 287.3 609 34.6
PSO170G6410 Papaver somniferum HOM05D006833 ORTHO05D006885 4.4e-75 286.6 682 32.0
TWI60G0692 Tripterygium wilfordii HOM05D006833 ORTHO05D006885 6.3e-74 282.7 526 35.0
PSO017G2707 Papaver somniferum HOM05D006833 ORTHO05D006885 1.1e-73 282.0 682 32.3
Gohir.A02G087001 Gossypium hirsutum HOM05D006833 ORTHO05D006885 1.8e-73 281.2 598 35.5
Aqoxy5G00920 Aquilegia oxysepala HOM05D006833 ORTHO05D006885 2.4e-73 280.8 722 29.6
Gohir.D02G101700 Gossypium hirsutum HOM05D006833 ORTHO05D006885 5.3e-73 279.6 607 35.3
Migut.C00328 Erythranthe guttata HOM05D006833 ORTHO05D006885 9.1e-73 278.9 537 36.1
DCAR_009847 Daucus carota HOM05D006833 ORTHO05D006885 1.6e-72 278.1 556 34.4
Sabra05G0201300 Salix brachista HOM05D006833 ORTHO05D006885 2.6e-72 277.3 529 35.7
Potri.002G001000 Populus trichocarpa HOM05D006833 ORTHO05D006885 3.5e-72 276.9 550 33.3
Gorai.005G115300 Gossypium raimondii HOM05D006833 ORTHO05D006885 4.5e-72 276.6 611 34.7
Solyc01g006880.4 Solanum lycopersicum HOM05D006833 ORTHO05D006885 7.7e-72 275.8 465 37.4
MD02G1278400 Malus domestica HOM05D006833 ORTHO05D006885 1.0e-71 275.4 488 37.5
Sopen01g002870 Solanum pennellii HOM05D006833 ORTHO05D006885 1.0e-71 275.4 465 36.8
MSTRG.24887 Avicennia marina HOM05D006833 ORTHO05D006885 1.7e-71 274.6 507 35.5
TWI34G1134 Tripterygium wilfordii HOM05D006833 ORTHO05D006885 1.7e-71 274.6 420 40.7
SalBow7G3917 Salvia bowleyana HOM05D006833 ORTHO05D006885 2.9e-71 273.9 533 35.6
Potri.005G260100 Populus trichocarpa HOM05D006833 ORTHO05D006885 5.0e-71 273.1 561 34.4
Sabra02G0000900 Salix brachista HOM05D001427 ORTHO05D006885 5.0e-71 273.1 567 33.7
AUR62011705 Chenopodium quinoa HOM05D006833 ORTHO05D006885 8.5e-71 272.3 390 41.5
Hund06168 Selenicereus undatus HOM05D006833 ORTHO05D006885 3.2e-70 270.4 442 37.8
Rhsim06G0000300 Rhododendron simsii HOM05D001427 ORTHO05D006885 1.2e-69 268.5 638 31.8
Thecc.08G096800 Theobroma cacao HOM05D006833 ORTHO05D006885 1.2e-69 268.5 390 41.0
Sc08g0002330 Simmondsia chinensis HOM05D006833 ORTHO05D006885 1.6e-69 268.1 610 31.8
Peaxi162Scf00675g00049 Petunia axillaris HOM05D006833 ORTHO05D006885 2.7e-69 267.3 616 31.0
TPR.G1724 Trifolium pratense HOM05D006833 ORTHO05D006885 2.7e-69 267.3 546 34.8
RcHm_v2.0_Chr7g0217731 Rosa chinensis HOM05D006833 ORTHO05D006885 4.7e-69 266.5 381 40.2
MELO3C026511.2 Cucumis melo HOM05D006833 ORTHO05D006885 6.1e-69 266.2 585 32.5
COL.COLO4_16220 Corchorus olitorius HOM05D006833 ORTHO05D006885 8.0e-69 265.8 426 37.3
CsaV3_6G035990 Cucumis sativus L. HOM05D006833 ORTHO05D006885 1.4e-68 265.0 585 32.6
Lsat_1_v5_gn_8_2261 Lactuca sativa HOM05D006833 ORTHO05D006885 1.4e-68 265.0 551 32.7
arahy.Tifrunner.gnm1.ann1.36ZQJX Arachis hypogaea HOM05D006833 ORTHO05D006885 1.8e-68 264.6 573 33.3
Lj6g0016974 Lotus japonicus HOM05D006833 ORTHO05D006885 2.3e-68 264.2 593 32.4
Cc10_g00060 Coffea canephora HOM05D006833 ORTHO05D006885 6.7e-68 262.7 392 39.5
Cpa.g.sc36.86 Carica papaya HOM05D006833 ORTHO05D006885 1.2e-67 261.9 594 31.3
FAN04G0199 Fragaria x ananassa HOM05D006833 ORTHO05D006885 1.2e-67 261.9 532 34.6
SGA_v2.0_scaffold161G37836 Striga asiatica HOM05D006833 ORTHO05D006885 1.2e-67 261.9 498 35.5
Lalb_Chr15g0083831 Lupinus albus HOM05D006833 ORTHO05D006885 3.3e-67 260.4 559 34.0
Medtr2g036060 Medicago truncatula HOM05D006833 ORTHO05D006885 3.3e-67 260.4 550 33.6
ECA233G4915 Erigeron canadensis HOM05D006833 ORTHO05D006885 7.5e-67 259.2 541 34.2
FAN18G3902 Fragaria x ananassa HOM05D006833 ORTHO05D006885 7.5e-67 259.2 571 32.0
arahy.Tifrunner.gnm1.ann1.F7NAU0 Arachis hypogaea HOM05D006833 ORTHO05D006885 1.3e-66 258.5 571 32.2
FvH4_5g26810 Fragaria vesca HOM05D006833 ORTHO05D006885 1.7e-66 258.1 571 32.0
Psat1g149680 Pisum sativum HOM05D006833 ORTHO05D006885 1.7e-66 258.1 435 38.9
HanXRQChr08g0226151 Helianthus annuus HOM05D006833 ORTHO05D006885 4.8e-66 256.5 528 35.0
Lalb_Chr18g0052171 Lupinus albus HOM05D006833 ORTHO05D006885 6.3e-66 256.1 593 33.4
Aa31LG9G12550 Aethionema arabicum HOM05D006833 ORTHO05D006885 5.3e-65 253.1 379 38.3
PGR083G0876 Punica granatum HOM05D006833 ORTHO05D006885 7.0e-65 252.7 436 35.6
Glyma.15G158500 Glycine max HOM05D006833 ORTHO05D006885 9.1e-65 252.3 545 35.4
FAN13G2656 Fragaria x ananassa HOM05D006833 ORTHO05D006885 1.2e-64 251.9 423 36.2
Oeu000732.1 Olea europaea HOM05D006833 ORTHO05D006885 2.7e-64 250.8 370 39.2
Duzib093G1949 Durio zibethinus HOM05D006833 ORTHO05D006885 5.9e-64 249.6 538 34.2
ClCG08G009140 Citrullus lanatus HOM05D006833 ORTHO05D006885 7.7e-64 249.2 577 31.2
VMungo1309G0756 Vigna mungo HOM05D006833 ORTHO05D006885 2.9e-63 247.3 426 37.6
EL10Ac9g21250 Beta vulgaris HOM05D006833 ORTHO05D006885 5.0e-63 246.5 432 34.3
Glyma.09G052200 Glycine max HOM05D006833 ORTHO05D006885 6.5e-63 246.1 614 33.2
CANSAT25G3285 Cannabis sativa HOM05D006833 ORTHO05D006885 1.1e-62 245.4 515 34.6
FAN08G1517 Fragaria x ananassa HOM05D006833 ORTHO05D006885 7.2e-62 242.7 550 33.3
Ah.01g023710 Amaranthus hybridus HOM05D006833 ORTHO05D006885 9.4e-62 242.3 546 33.0
Phvul.009G241600 Phaseolus vulgaris HOM05D006833 ORTHO05D006885 2.1e-61 241.1 448 36.6
THA.LOC104801650 Tarenaya hassleriana HOM05D006833 ORTHO05D006885 1.4e-60 238.4 410 36.6
CAN.G911.31 Capsicum annuum HOM05D006833 ORTHO05D006885 6.8e-60 236.1 408 34.8
Nitab4.5_0000220g0010 Nicotiana tabacum HOM05D006833 ORTHO05D006885 6.8e-60 236.1 575 30.3
AT5G42400 Arabidopsis thaliana HOM05D006833 ORTHO05D006885 2.6e-59 234.2 632 29.4
Nitab4.5_0007430g0010 Nicotiana tabacum HOM05D006833 ORTHO05D006885 2.6e-59 234.2 365 36.4
BcaB07g31077 Brassica carinata HOM05D006833 ORTHO05D006885 9.8e-59 232.3 615 28.8
CARHR285110 Cardamine hirsuta HOM05D006833 ORTHO05D006885 2.8e-58 230.7 619 30.4
Thhalv10003132m.g Eutrema salsugineum HOM05D006833 ORTHO05D006885 4.8e-58 229.9 476 32.1
HPP92_019647 Vanilla planifolia HOM05D006833 ORTHO05D006885 1.8e-57 228.0 558 33.2
BcaC04g21996 Brassica carinata HOM05D006833 ORTHO05D006885 9.1e-57 225.7 386 36.3
Carub.0008s0676 Capsella rubella HOM05D006833 ORTHO05D006885 9.1e-57 225.7 466 32.4
Sp7g08030 Schrenkiella parvula HOM05D006833 ORTHO05D006885 9.1e-57 225.7 581 29.8
AL8G19090 Arabidopsis lyrata HOM05D006833 ORTHO05D006885 1.2e-56 225.3 587 30.2
BolC9t55397H Brassica oleracea HOM05D006833 ORTHO05D006885 1.2e-56 225.3 396 36.1
Ca_02003_v3 Cicer arietinum L. HOM05D006833 ORTHO05D006885 1.2e-56 225.3 537 34.3
ATR0605G021 Amborella trichopoda HOM05D006833 ORTHO05D006885 1.6e-56 224.9 648 29.6
C09p25030 Brassica napus HOM05D006833 ORTHO05D006885 3.5e-56 223.8 386 36.0
BraA09t37578Z Brassica rapa HOM05D006833 ORTHO05D006885 1.1e-54 218.8 405 35.1
A09p19670 Brassica napus HOM05D006833 ORTHO05D006885 2.5e-54 217.6 381 35.4
Sed0005718 Sechium edule HOM05D006833 ORTHO05D006885 1.6e-53 214.9 313 39.3
AUR62012925 Chenopodium quinoa HOM05D006833 ORTHO05D006885 5.2e-52 209.9 365 35.6
Os12g0613200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006885 1.3e-50 205.3 557 30.0
Eucgr.F01958 Eucalyptus grandis HOM05D006833 ORTHO05D006885 1.7e-50 204.9 353 38.5
unitig_46.g17973 Utricularia gibba HOM05D006833 ORTHO05D006885 5.0e-47 193.4 281 40.6
Zm00001eb406010 Zea mays HOM05D006833 ORTHO05D006885 1.4e-44 185.3 499 29.1
MD07G1046400 Malus domestica HOM05D006833 ORTHO05D006885 4.6e-32 143.7 402 30.1
Psat5g081960 Pisum sativum HOM05D002713 ORTHO05D008299 2.1e-21 108.2 73 64.4
SEGI_04349 Sequoiadendron giganteum HOM05D000590 ORTHO05D006885 2.3e-20 104.8 497 24.1
SHI07931 Sapria himalayana HOM05D006833 ORTHO05D006885 5.2e-20 103.6 214 35.0
Psat5g082120 Pisum sativum HOM05D002713 ORTHO05D008299 9.9e-19 99.4 68 63.2
Actinidia08363 Actinidia chinensis HOM05D006833 ORTHO05D006885 2.0e-11 75.1 140 33.6
Aqoxy1G00115 Aquilegia oxysepala HOM05D006833 ORTHO05D006885 2.2e-10 71.6 39 74.4
AagrBONN_evm.TU.Sc2ySwM_228.128 Anthoceros agrestis HOM05D000590 ORTHO05D006885 1.5e-06 58.9 48 54.2


User provided reference genes

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