Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0965 Ceratophyllum demersum HOM05D001175 ORTHO05D003291 2.1e-123 446.0 283 100.0
CDE02G0513 Ceratophyllum demersum HOM05D001175 ORTHO05D003291 2.3e-106 389.4 284 90.8
MBI06_g29670_MAGBIO Magnolia biondii HOM05D001175 ORTHO05D003291 1.1e-44 184.5 316 47.8
CDE06G0884 Ceratophyllum demersum HOM05D001175 ORTHO05D003291 4.6e-38 162.5 294 42.2
Cfa018381 Carpinus fangiana HOM05D001175 ORTHO05D003291 1.0e-37 161.4 323 40.9
Aqoxy5G02236 Aquilegia oxysepala HOM05D001175 ORTHO05D003291 5.1e-37 159.1 329 43.5
Dinv25795 Davidia involucrata HOM05D001175 ORTHO05D003291 8.7e-37 158.3 324 42.0
Manes.02G173700 Manihot esculenta HOM05D001175 ORTHO05D003291 1.5e-36 157.5 321 40.5
Dinv41135 Davidia involucrata HOM05D001175 ORTHO05D003291 5.6e-36 155.6 320 40.6
TAR628G0144 Trochodendron aralioides HOM05D001175 ORTHO05D003291 1.6e-35 154.1 325 40.3
CDE08G1383 Ceratophyllum demersum HOM05D001175 ORTHO05D003291 2.1e-35 153.7 293 41.3
QL09p029009 Quercus lobata HOM05D001175 ORTHO05D003291 1.1e-34 151.4 319 39.2
Haze_17691 Corylus avellana HOM05D001175 ORTHO05D003291 5.3e-34 149.1 324 39.8
TAR381G1233 Trochodendron aralioides HOM05D001175 ORTHO05D003291 1.5e-33 147.5 318 41.8
RcHm_v2.0_Chr6g0277461 Rosa chinensis HOM05D001175 ORTHO05D003291 2.6e-33 146.7 326 40.8
CiPaw.15G022600 Carya illinoinensis HOM05D001175 ORTHO05D003291 5.8e-33 145.6 323 38.1
MD05G1012000 Malus domestica HOM05D001175 ORTHO05D003291 4.9e-32 142.5 313 37.4
MBI03_g35247_MAGBIO Magnolia biondii HOM05D001175 ORTHO05D003291 8.4e-32 141.7 323 47.7
arahy.Tifrunner.gnm1.ann1.8WX4TX Arachis hypogaea HOM05D001175 ORTHO05D003291 1.1e-31 141.4 328 37.5
Ciclev10000185m.g Citrus clementina HOM05D001175 ORTHO05D003291 1.9e-31 140.6 339 36.9
Thecc.08G142300 Theobroma cacao HOM05D001175 ORTHO05D003291 2.4e-31 140.2 335 37.3
arahy.Tifrunner.gnm1.ann1.2FQ9M1 Arachis hypogaea HOM05D001175 ORTHO05D003291 3.2e-31 139.8 328 37.2
CSS0039656 Camellia sinensis var. sinensis HOM05D001175 ORTHO05D003291 3.2e-31 139.8 327 38.2
MD10G1012000 Malus domestica HOM05D001175 ORTHO05D003291 5.5e-31 139.0 317 37.2
Glyma.04G241900 Glycine max HOM05D001175 ORTHO05D003291 7.1e-31 138.7 325 37.5
Lj1g0005719 Lotus japonicus HOM05D001175 ORTHO05D003291 1.2e-30 137.9 325 37.5
Glyma.06G121500 Glycine max HOM05D001175 ORTHO05D003291 2.7e-30 136.7 325 37.5
VMungo0647G2027 Vigna mungo HOM05D001175 ORTHO05D003291 6.0e-30 135.6 328 37.5
FAN20G0732 Fragaria x ananassa HOM05D001175 ORTHO05D003291 3.9e-29 132.9 322 40.7
Actinidia15168 Actinidia chinensis HOM05D001175 ORTHO05D003291 5.1e-29 132.5 313 36.7
Gohir.A02G067800 Gossypium hirsutum HOM05D001175 ORTHO05D003291 5.1e-29 132.5 330 37.0
Lalb_Chr08g0240841 Lupinus albus HOM05D001175 ORTHO05D003291 5.1e-29 132.5 324 36.1
FAN27G0104 Fragaria x ananassa HOM05D001175 ORTHO05D003291 1.5e-28 131.0 324 39.5
Gohir.D02G073800 Gossypium hirsutum HOM05D001175 ORTHO05D003291 1.5e-28 131.0 329 36.5
Prupe.8G017000 Prunus persica HOM05D001175 ORTHO05D003291 1.5e-28 131.0 329 37.1
Manes.18G086300 Manihot esculenta HOM05D001175 ORTHO05D003291 2.5e-28 130.2 321 38.0
Actinidia03443 Actinidia chinensis HOM05D001175 ORTHO05D003291 3.3e-28 129.8 306 38.9
SalBow6G3246 Salvia bowleyana HOM05D001175 ORTHO05D003291 4.3e-28 129.4 322 36.0
SalBow6G4047 Salvia bowleyana HOM05D001175 ORTHO05D003291 4.3e-28 129.4 322 36.0
Potri.005G186900 Populus trichocarpa HOM05D001175 ORTHO05D003291 7.4e-28 128.6 324 35.8
TPR.G33334 Trifolium pratense HOM05D001175 ORTHO05D003291 9.6e-28 128.3 318 36.2
Psat6g039480 Pisum sativum HOM05D001175 ORTHO05D003291 1.3e-27 127.9 317 35.3
Gorai.005G083200 Gossypium raimondii HOM05D001175 ORTHO05D003291 1.6e-27 127.5 328 35.7
CSS0010406 Camellia sinensis var. sinensis HOM05D001175 ORTHO05D003291 2.8e-27 126.7 326 35.6
AUR62026794 Chenopodium quinoa HOM05D001175 ORTHO05D003291 4.8e-27 125.9 320 35.9
Lalb_Chr11g0066371 Lupinus albus HOM05D001175 ORTHO05D003291 4.8e-27 125.9 285 36.5
Actinidia29510 Actinidia chinensis HOM05D001175 ORTHO05D003291 6.2e-27 125.6 310 37.1
TWI32G0263 Tripterygium wilfordii HOM05D001175 ORTHO05D003291 6.2e-27 125.6 320 35.0
CANSAT25G2918 Cannabis sativa HOM05D001175 ORTHO05D003291 1.1e-26 124.8 336 33.0
Eucgr.F04275 Eucalyptus grandis HOM05D001175 ORTHO05D003291 1.1e-26 124.8 323 38.4
FvH4_2g14890 Fragaria vesca HOM05D001175 ORTHO05D003291 1.4e-26 124.4 324 39.5
FAN15G1627 Fragaria x ananassa HOM05D001175 ORTHO05D003291 1.4e-26 124.4 324 39.5
Sabra05G0142800 Salix brachista HOM05D001175 ORTHO05D003291 1.4e-26 124.4 320 35.6
Hund17389 Selenicereus undatus HOM05D001175 ORTHO05D003291 1.8e-26 124.0 319 36.7
Duzib041G0421 Durio zibethinus HOM05D001175 ORTHO05D003291 2.4e-26 123.6 327 36.1
Phvul.001G064200 Phaseolus vulgaris HOM05D001175 ORTHO05D003291 2.4e-26 123.6 328 36.3
Psat5g081560 Pisum sativum HOM05D001175 ORTHO05D003291 2.4e-26 123.6 317 37.2
EL10Ac1g01447 Beta vulgaris HOM05D001175 ORTHO05D003291 3.1e-26 123.2 337 34.4
AUR62013477 Chenopodium quinoa HOM05D001175 ORTHO05D003291 3.1e-26 123.2 296 37.2
FAN24G2465 Fragaria x ananassa HOM05D001175 ORTHO05D003291 4.0e-26 122.9 324 38.6
Cc10_g13110 Coffea canephora HOM05D001175 ORTHO05D003291 6.9e-26 122.1 320 35.0
Migut.N03246 Erythranthe guttata HOM05D001175 ORTHO05D003291 6.9e-26 122.1 305 43.0
Gohir.D03G061702 Gossypium hirsutum HOM05D001175 ORTHO05D003291 6.9e-26 122.1 330 37.6
Gorai.013G106300 Gossypium raimondii HOM05D001175 ORTHO05D003291 6.9e-26 122.1 329 38.0
MSTRG.22386 Avicennia marina HOM05D001175 ORTHO05D003291 9.0e-26 121.7 286 36.7
COL.COLO4_33802 Corchorus olitorius HOM05D001175 ORTHO05D003291 9.0e-26 121.7 334 35.9
CSS0003475 Camellia sinensis var. sinensis HOM05D001175 ORTHO05D003291 1.2e-25 121.3 321 36.4
Duzib116G0064 Durio zibethinus HOM05D001175 ORTHO05D003291 1.2e-25 121.3 331 35.6
Glyma.13G037600 Glycine max HOM05D001175 ORTHO05D003291 1.2e-25 121.3 338 35.8
VMungo1309G1676 Vigna mungo HOM05D001175 ORTHO05D003291 3.4e-25 119.8 247 37.7
Phvul.009G134000 Phaseolus vulgaris HOM05D001175 ORTHO05D003291 7.6e-25 118.6 247 37.2
TWI34G1314 Tripterygium wilfordii HOM05D001175 ORTHO05D003291 7.6e-25 118.6 321 35.2
Potri.002G072900 Populus trichocarpa HOM05D001175 ORTHO05D003291 1.0e-24 118.2 319 34.2
Hma1.2p1_0655F.1_g196730 Hydrangea macrophylla HOM05D001175 ORTHO05D003291 1.7e-24 117.5 313 35.1
MELO3C008420.2 Cucumis melo HOM05D001175 ORTHO05D003291 2.2e-24 117.1 325 34.8
Lj4A690T48 Lonicera japonica HOM05D001175 ORTHO05D003291 3.8e-24 116.3 297 36.0
Gohir.A02G126000 Gossypium hirsutum HOM05D001175 ORTHO05D003291 6.5e-24 115.5 327 36.4
Ah.05g169310 Amaranthus hybridus HOM05D001175 ORTHO05D003291 8.4e-24 115.2 344 33.4
Actinidia16587 Actinidia chinensis HOM05D001175 ORTHO05D003291 1.1e-23 114.8 321 34.6
Lj7C362G7 Lonicera japonica HOM05D001175 ORTHO05D003291 1.1e-23 114.8 310 37.4
Oeu002393.1 Olea europaea HOM05D001175 ORTHO05D003291 1.1e-23 114.8 300 35.7
Sabra02G0057300 Salix brachista HOM05D001175 ORTHO05D003291 1.1e-23 114.8 319 34.2
TAR625G1326 Trochodendron aralioides HOM05D001175 ORTHO05D003291 1.4e-23 114.4 325 43.1
Duzib187G0054 Durio zibethinus HOM05D001175 ORTHO05D003291 1.9e-23 114.0 310 31.9
Peaxi162Scf00066g02017 Petunia axillaris HOM05D001175 ORTHO05D003291 2.5e-23 113.6 329 32.5
Glyma.14G119800 Glycine max HOM05D001175 ORTHO05D003291 3.2e-23 113.2 328 35.1
Oeu001557.1 Olea europaea HOM05D001175 ORTHO05D003291 3.2e-23 113.2 294 38.4
HPP92_002047 Vanilla planifolia HOM05D001175 ORTHO05D003291 3.2e-23 113.2 315 35.6
Lalb_Chr23g0271321 Lupinus albus HOM05D001175 ORTHO05D003291 5.5e-23 112.5 321 35.2
Peaxi162Scf00033g00415 Petunia axillaris HOM05D001175 ORTHO05D003291 5.5e-23 112.5 325 31.7
CAN.G319.4 Capsicum annuum HOM05D001175 ORTHO05D003291 7.1e-23 112.1 329 32.2
Duzib264G0298 Durio zibethinus HOM05D001175 ORTHO05D003291 1.0e-21 108.2 312 34.0
COL.COLO4_35731 Corchorus olitorius HOM05D001175 ORTHO05D003291 1.8e-21 107.5 305 39.0
SHI09276 Sapria himalayana HOM05D001175 ORTHO05D003291 1.8e-21 107.5 317 32.8
CsaV3_6G031050 Cucumis sativus L. HOM05D001175 ORTHO05D003291 2.3e-21 107.1 325 33.2
Sed0021141 Sechium edule HOM05D001175 ORTHO05D003291 2.3e-21 107.1 319 32.3
Lj1g0024089 Lotus japonicus HOM05D001175 ORTHO05D003291 5.1e-21 105.9 331 33.2
Rhsim11G0077100 Rhododendron simsii HOM05D001175 ORTHO05D003291 5.1e-21 105.9 305 34.4
ClCG08G006370 Citrullus lanatus HOM05D001175 ORTHO05D003291 1.5e-20 104.4 324 36.1
PGR042G1127 Punica granatum HOM05D001175 ORTHO05D003291 3.3e-20 103.2 320 34.4
Sopen06g019820 Solanum pennellii HOM05D001175 ORTHO05D003291 3.3e-20 103.2 285 33.3
DCAR_001115 Daucus carota HOM05D001175 ORTHO05D003291 4.3e-20 102.8 314 32.5
Medtr1g029400 Medicago truncatula HOM05D001175 ORTHO05D003291 4.3e-20 102.8 250 36.0
Ca_12657_v3 Cicer arietinum L. HOM05D005364 ORTHO05D003291 5.7e-20 102.4 306 32.7
Sopen06g019830 Solanum pennellii HOM05D001175 ORTHO05D003291 7.4e-20 102.1 334 30.2
ClCG08G002750 Citrullus lanatus HOM05D001175 ORTHO05D003291 1.3e-19 101.3 319 31.3
CAN.G657.1 Capsicum annuum HOM05D001175 ORTHO05D003291 1.6e-19 100.9 292 32.9
Duzib093G0267 Durio zibethinus HOM05D001175 ORTHO05D003291 1.6e-19 100.9 326 33.7
Haze_25225 Corylus avellana HOM05D001175 ORTHO05D003291 2.8e-19 100.1 310 32.6
QL06p028692 Quercus lobata HOM05D001175 ORTHO05D003291 3.7e-19 99.8 317 32.8
Dinv07378 Davidia involucrata HOM05D001175 ORTHO05D003291 4.8e-19 99.4 334 32.3
TWI31G0665 Tripterygium wilfordii HOM05D001175 ORTHO05D003291 8.2e-19 98.6 276 33.7
ATR1136G212 Amborella trichopoda HOM05D001175 ORTHO05D003291 1.1e-18 98.2 304 43.1
MSTRG.24183 Avicennia marina HOM05D001175 ORTHO05D003291 1.8e-18 97.4 250 32.8
Sed0026488 Sechium edule HOM05D001175 ORTHO05D003291 4.1e-18 96.3 321 32.1
MSTRG.25337 Avicennia marina HOM05D001175 ORTHO05D003291 5.3e-18 95.9 319 33.2
Solyc06g059760.3 Solanum lycopersicum HOM05D001175 ORTHO05D003291 9.0e-18 95.1 328 29.6
Medtr3g089075 Medicago truncatula HOM05D001175 ORTHO05D003291 1.5e-17 94.4 322 32.0
PSO541G4630 Papaver somniferum HOM05D001175 ORTHO05D003291 4.5e-17 92.8 344 37.2
TPR.G31346 Trifolium pratense HOM05D001175 ORTHO05D003291 4.5e-17 92.8 319 33.5
Nitab4.5_0002972g0010 Nicotiana tabacum HOM05D001175 ORTHO05D003291 7.7e-17 92.0 278 32.4
Oeu045996.1 Olea europaea HOM05D001175 ORTHO05D003291 7.7e-17 92.0 275 30.5
Atru.chr13.1668 Acer truncatum HOM05D001175 ORTHO05D003291 1.3e-16 91.3 238 37.0
ECA247G1079 Erigeron canadensis HOM05D001175 ORTHO05D003291 1.3e-16 91.3 321 31.5
Cpa.g.sc26.90 Carica papaya HOM05D001175 ORTHO05D003291 1.7e-16 90.9 238 37.4
Eucgr.F02753 Eucalyptus grandis HOM05D001175 ORTHO05D003291 2.2e-16 90.5 306 33.3
MELO3C010585.2 Cucumis melo HOM05D001175 ORTHO05D003291 2.9e-16 90.1 323 36.5
HanXRQChr04g0109511 Helianthus annuus HOM05D001175 ORTHO05D003291 3.8e-16 89.7 295 35.3
Sed0013770 Sechium edule HOM05D001175 ORTHO05D003291 5.0e-16 89.4 334 32.3
Ca_16645_v3 Cicer arietinum L. HOM05D001175 ORTHO05D003291 6.5e-16 89.0 316 37.7
CsaV3_6G035610 Cucumis sativus L. HOM05D001175 ORTHO05D003291 5.5e-15 85.9 324 31.5
PSO675G1006 Papaver somniferum HOM05D001175 ORTHO05D003291 9.4e-15 85.1 340 34.1
Thecc.01G131100 Theobroma cacao HOM05D001175 ORTHO05D003291 1.2e-14 84.7 315 28.6
PGR044G1174 Punica granatum HOM05D001175 ORTHO05D003291 2.1e-14 84.0 314 33.4
Duzib147G0828 Durio zibethinus HOM05D001175 ORTHO05D003291 3.6e-14 83.2 310 27.7
Sc02g0004490 Simmondsia chinensis HOM05D001175 ORTHO05D003291 1.0e-13 81.6 237 35.4
GSVIVG01026491001 Vitis vinifera HOM05D001175 ORTHO05D003291 1.4e-13 81.3 315 30.2
Solyc06g059750.3 Solanum lycopersicum HOM05D001175 ORTHO05D003291 1.8e-13 80.9 311 28.3
DCAR_010237 Daucus carota HOM05D001175 ORTHO05D003291 5.1e-13 79.3 220 35.0
Oeu025717.1 Olea europaea HOM05D001175 ORTHO05D003291 1.1e-12 78.2 273 29.7
Potri.007G109400 Populus trichocarpa HOM05D001175 ORTHO05D003291 3.3e-12 76.6 320 28.4
CiPaw.16G018500 Carya illinoinensis HOM05D001175 ORTHO05D003291 4.3e-12 76.3 124 46.0
Potri.005G058501 Populus trichocarpa HOM05D001175 ORTHO05D003291 1.3e-11 74.7 316 30.7
Gohir.A11G057000 Gossypium hirsutum HOM05D001175 ORTHO05D003291 2.2e-11 73.9 314 29.0
Os11g0207000 Oryza sativa ssp. japonica HOM05D001175 ORTHO05D003291 2.2e-11 73.9 321 38.0
THA.LOC104798863 Tarenaya hassleriana HOM05D001175 ORTHO05D003291 2.8e-11 73.6 321 30.2
Gorai.007G065800 Gossypium raimondii HOM05D001175 ORTHO05D003291 3.7e-11 73.2 322 30.7
Psat3g018320 Pisum sativum HOM05D002012 ORTHO05D001992 6.3e-11 72.4 134 39.6
Aa31LG9G14130 Aethionema arabicum HOM05D001175 ORTHO05D003291 8.2e-11 72.0 279 32.6
Gohir.D11G061100 Gossypium hirsutum HOM05D001175 ORTHO05D003291 8.2e-11 72.0 314 28.7
PSO170G0978 Papaver somniferum HOM05D001175 ORTHO05D003291 1.1e-10 71.6 383 30.0
Aa31LG9G14150 Aethionema arabicum HOM05D001175 ORTHO05D003291 1.8e-10 70.9 285 33.3
Sabra07G0089500 Salix brachista HOM05D001175 ORTHO05D003291 2.4e-10 70.5 250 28.8
Sed0008940 Sechium edule HOM05D001175 ORTHO05D003291 4.1e-10 69.7 299 29.1
AL1G51990 Arabidopsis lyrata HOM05D001175 ORTHO05D003291 6.9e-10 68.9 244 31.6
GSVIVG01010013001 Vitis vinifera HOM05D001175 ORTHO05D003291 9.1e-10 68.6 304 29.9
Sp1g33070 Schrenkiella parvula HOM05D001175 ORTHO05D003291 1.2e-09 68.2 307 40.7
THA.LOC104798857 Tarenaya hassleriana HOM05D001175 ORTHO05D003291 2.0e-09 67.4 327 29.7
PSO017G4885 Papaver somniferum HOM05D001175 ORTHO05D003291 3.4e-09 66.6 384 29.7
Migut.C01103 Erythranthe guttata HOM05D001175 ORTHO05D003291 4.5e-09 66.2 324 29.3
Nitab4.5_0000174g0220 Nicotiana tabacum HOM05D001175 ORTHO05D003291 7.7e-09 65.5 292 28.4
SGA_v2.0_scaffold25G11150 Striga asiatica HOM05D001175 ORTHO05D003291 7.7e-09 65.5 320 30.3
unitig_21.g20183 Utricularia gibba HOM05D001175 ORTHO05D003291 7.7e-09 65.5 311 29.3
BcaB07g33973 Brassica carinata HOM05D001175 ORTHO05D003291 2.9e-08 63.5 301 30.2
unitig_52.g17542 Utricularia gibba HOM05D001175 ORTHO05D003291 2.9e-08 63.5 286 31.5
Zm00001eb138590 Zea mays HOM05D001175 ORTHO05D003291 2.9e-08 63.5 324 28.7
Os11g0207100 Oryza sativa ssp. japonica HOM05D001175 ORTHO05D003291 3.8e-08 63.2 335 32.5
Potri.013G089900 Populus trichocarpa HOM05D001175 ORTHO05D003291 8.5e-08 62.0 115 40.9
SGA_v2.0_scaffold19G08630 Striga asiatica HOM05D001175 ORTHO05D003291 1.2e-06 58.2 316 32.9
unitig_62.g23523 Utricularia gibba HOM05D001175 ORTHO05D003291 1.6e-06 57.8 258 29.8
Zm00001eb409170 Zea mays HOM05D001175 ORTHO05D003291 3.6e-06 56.6 321 27.4
CARHR035410 Cardamine hirsuta HOM05D001175 ORTHO05D003291 7.9e-06 55.5 313 32.3


User provided reference genes

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