Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.6e-123 446.0 216 100.0
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.7e-91 338.2 178 91.6
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.6e-83 312.0 201 74.1
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 4.7e-83 311.6 201 74.6
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 8.0e-83 310.8 201 73.6
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 1.4e-82 310.1 201 72.6
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 2.3e-82 309.3 201 73.6
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 8.8e-82 307.4 201 73.6
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 8.8e-82 307.4 201 73.1
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.2e-81 307.0 207 72.5
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 2.6e-81 305.8 201 73.1
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 2.8e-80 302.4 201 73.1
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 3.7e-80 302.0 201 72.1
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 8.3e-80 300.8 201 72.1
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.1e-79 300.4 201 71.1
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.1e-79 300.4 201 71.6
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 4.1e-79 298.5 201 69.7
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 5.4e-79 298.1 201 71.1
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 5.4e-79 298.1 201 70.1
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 9.2e-79 297.4 201 70.6
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 1.2e-78 297.0 200 70.5
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 1.6e-78 296.6 201 71.6
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 3.5e-78 295.4 201 70.6
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 4.5e-78 295.0 201 70.1
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 5.9e-78 294.7 201 70.1
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 1.0e-77 293.9 201 70.6
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 1.3e-77 293.5 215 66.0
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.7e-77 293.1 200 69.5
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 1.7e-77 293.1 215 66.0
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 1.7e-77 293.1 199 69.8
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.7e-77 293.1 200 69.5
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 2.9e-77 292.4 201 69.2
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 2.9e-77 292.4 201 68.7
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 3.8e-77 292.0 201 67.2
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 5.0e-77 291.6 201 69.7
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 5.0e-77 291.6 201 69.7
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 6.6e-77 291.2 191 72.3
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 6.6e-77 291.2 201 69.2
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 8.6e-77 290.8 201 69.2
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 1.5e-76 290.0 201 69.7
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 1.9e-76 289.7 202 70.3
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 1.9e-76 289.7 202 70.3
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 2.5e-76 289.3 201 68.7
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 3.3e-76 288.9 201 68.2
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 5.6e-76 288.1 201 68.2
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.6e-76 288.1 206 66.0
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 5.6e-76 288.1 198 68.7
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 5.6e-76 288.1 201 68.7
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 7.3e-76 287.7 201 69.2
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 7.3e-76 287.7 201 68.2
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 9.5e-76 287.3 201 69.2
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.2e-75 287.0 192 70.3
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 2.1e-75 286.2 200 68.0
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 2.1e-75 286.2 201 67.7
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 2.8e-75 285.8 201 68.2
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 3.6e-75 285.4 201 67.2
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 6.1e-75 284.6 201 69.2
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 8.0e-75 284.3 201 66.7
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 8.0e-75 284.3 201 67.2
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 1.0e-74 283.9 202 67.3
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 1.4e-74 283.5 201 69.2
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.4e-74 283.5 199 68.8
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 1.8e-74 283.1 201 67.2
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 2.3e-74 282.7 201 68.7
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 3.0e-74 282.3 201 67.7
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 3.0e-74 282.3 201 65.7
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 4.0e-74 282.0 201 67.7
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 4.0e-74 282.0 199 68.3
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.0e-74 282.0 199 68.3
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 6.8e-74 281.2 201 67.2
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 1.2e-73 280.4 201 67.2
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 1.5e-73 280.0 201 67.2
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 2.6e-73 279.3 201 67.2
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 2.6e-73 279.3 201 66.2
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 9.8e-73 277.3 201 65.7
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 1.3e-72 276.9 201 67.2
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 1.3e-72 276.9 205 66.3
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 2.9e-72 275.8 201 65.2
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 1.1e-71 273.9 201 67.7
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 3.2e-71 272.3 194 67.0
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 9.2e-71 270.8 174 72.4
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 2.0e-70 269.6 201 66.7
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 3.5e-70 268.9 201 65.2
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 5.9e-70 268.1 199 62.8
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 7.8e-70 267.7 201 65.2
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 1.1e-68 263.8 201 63.7
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 1.5e-68 263.5 201 65.7
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 4.3e-68 261.9 202 62.9
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 5.6e-68 261.5 201 61.2
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 6.2e-67 258.1 201 60.7
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 6.8e-66 254.6 201 63.2
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 1.2e-65 253.8 201 58.7
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 2.0e-65 253.1 205 59.5
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 2.0e-65 253.1 199 63.3
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 3.7e-64 248.8 186 65.6
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 2.0e-62 243.0 164 70.1
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 2.3e-58 229.6 205 54.1
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 3.5e-54 215.7 275 42.9
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 7.6e-49 198.0 208 45.7
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 3.5e-46 189.1 188 46.8
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 4.6e-46 188.7 130 66.9
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 1.8e-42 176.8 199 43.2
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.4e-42 176.4 217 47.0
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 5.4e-39 165.2 200 45.0
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 1.6e-35 153.7 267 35.6
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.6e-35 153.7 198 45.5
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 3.6e-35 152.5 100 67.0
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 1.1e-34 151.0 268 35.1
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 2.7e-30 136.3 183 39.9
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 3.0e-29 132.9 111 55.9
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 2.8e-27 126.3 94 62.8
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 4.0e-26 122.5 200 36.5
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 2.3e-21 106.7 202 33.2
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 5.5e-15 85.5 69 59.4
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 2.1e-14 83.6 166 30.1
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.0e-13 81.3 197 31.5
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 1.4e-10 70.9 50 60.0
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 1.1e-07 61.2 36 80.6


User provided reference genes

Program Settings