Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0541 Ceratophyllum demersum HOM05D004730 ORTHO05D005705 4.9e-67 257.7 133 100.0
CDE05G0988 Ceratophyllum demersum HOM05D004730 ORTHO05D005705 5.5e-34 147.9 100 74.0
CDE08G1494 Ceratophyllum demersum HOM05D004730 ORTHO05D005705 6.8e-32 141.0 137 62.8
Dinv32581 Davidia involucrata HOM05D004730 ORTHO05D005705 2.2e-22 109.4 96 59.4
GSVIVG01027092001 Vitis vinifera HOM05D004730 ORTHO05D005705 8.3e-22 107.5 96 58.3
MBI06_g08459_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 1.8e-21 106.3 87 69.0
Nn1g01877 Nelumbo nucifera HOM05D004730 ORTHO05D005705 2.4e-21 105.9 87 65.5
TAR374G0734 Trochodendron aralioides HOM05D004730 ORTHO05D005705 5.4e-21 104.8 83 65.1
Dinv35110 Davidia involucrata HOM05D004730 ORTHO05D005705 5.9e-20 101.3 96 56.2
PGSC0003DMG400017986 Solanum tuberosum HOM05D004730 ORTHO05D005705 7.7e-20 100.9 84 54.8
Migut.B01859 Erythranthe guttata HOM05D004730 ORTHO05D005705 1.7e-19 99.8 90 56.7
Solyc05g050390.4 Solanum lycopersicum HOM05D004730 ORTHO05D005705 5.0e-19 98.2 88 55.7
Sopen05g028800 Solanum pennellii HOM05D004730 ORTHO05D005705 5.0e-19 98.2 88 55.7
Actinidia10133 Actinidia chinensis HOM05D004730 ORTHO05D005705 6.6e-19 97.8 89 58.4
Actinidia20237 Actinidia chinensis HOM05D004730 ORTHO05D005705 4.2e-18 95.1 85 57.6
Nitab4.5_0000258g0150 Nicotiana tabacum HOM05D004730 ORTHO05D005705 4.2e-18 95.1 88 54.5
Nitab4.5_0004506g0070 Nicotiana tabacum HOM05D004730 ORTHO05D005705 4.2e-18 95.1 88 54.5
SGA_v2.0_scaffold5G03013 Striga asiatica HOM05D004730 ORTHO05D005705 4.2e-18 95.1 88 54.5
DCAR_005384 Daucus carota HOM05D004730 ORTHO05D005705 1.2e-17 93.6 82 58.5
Lsat_1_v5_gn_3_139961 Lactuca sativa HOM05D004730 ORTHO05D005705 1.6e-17 93.2 82 59.8
Cc02_g39260 Coffea canephora HOM05D004730 ORTHO05D005705 2.1e-17 92.8 92 54.3
SalBow3G2618 Salvia bowleyana HOM05D004730 ORTHO05D005705 3.6e-17 92.0 92 52.2
CAN.G239.1 Capsicum annuum HOM05D004730 ORTHO05D005705 8.0e-17 90.9 88 52.3
MSTRG.17337 Avicennia marina HOM05D004730 ORTHO05D005705 1.0e-16 90.5 90 51.1
Hund16708 Selenicereus undatus HOM05D004730 ORTHO05D005705 1.0e-16 90.5 82 53.7
vmacro13156 Vaccinium macrocarpon HOM05D004730 ORTHO05D005705 1.0e-16 90.5 92 57.6
Oeu015369.3 Olea europaea HOM05D004730 ORTHO05D005705 3.0e-16 89.0 92 50.0
CSS0011474 Camellia sinensis var. sinensis HOM05D004730 ORTHO05D005705 5.2e-16 88.2 83 57.8
Ciclev10019746m.g Citrus clementina HOM05D004730 ORTHO05D005705 8.9e-16 87.4 85 54.1
Rhsim07G0004700 Rhododendron simsii HOM05D004730 ORTHO05D005705 8.9e-16 87.4 92 53.3
Carub.0003s3432 Capsella rubella HOM05D004730 ORTHO05D005705 4.4e-15 85.1 90 52.2
Carub.0005s2846 Capsella rubella HOM05D004730 ORTHO05D005705 4.4e-15 85.1 90 52.2
Duzib138G0598 Durio zibethinus HOM05D004730 ORTHO05D005705 4.4e-15 85.1 98 54.1
ECA248G0182 Erigeron canadensis HOM05D004730 ORTHO05D005705 4.4e-15 85.1 81 55.6
Cfa003807 Carpinus fangiana HOM05D004730 ORTHO05D005705 5.7e-15 84.7 96 52.1
COL.COLO4_06293 Corchorus olitorius HOM05D004730 ORTHO05D005705 9.8e-15 84.0 93 53.8
Lalb_Chr21g0314351 Lupinus albus HOM05D004730 ORTHO05D005705 9.8e-15 84.0 96 50.0
Manes.01G246700 Manihot esculenta HOM05D004730 ORTHO05D005705 1.3e-14 83.6 93 53.8
Aqoxy2G00449 Aquilegia oxysepala HOM05D004730 ORTHO05D005705 1.7e-14 83.2 105 46.7
Sc23g0002110 Simmondsia chinensis HOM05D004730 ORTHO05D005705 2.2e-14 82.8 82 50.0
Thecc.01G343400 Theobroma cacao HOM05D004730 ORTHO05D005705 2.2e-14 82.8 93 54.8
HPP92_011453 Vanilla planifolia HOM05D004730 ORTHO05D005705 2.2e-14 82.8 96 50.0
Haze_15648 Corylus avellana HOM05D004730 ORTHO05D005705 2.8e-14 82.4 96 51.0
CiPaw.01G075800 Carya illinoinensis HOM05D004730 ORTHO05D005705 3.7e-14 82.0 91 52.7
EL10Ac1g00278 Beta vulgaris HOM05D004730 ORTHO05D005705 4.9e-14 81.6 82 51.2
vmacro12679 Vaccinium macrocarpon HOM05D004730 ORTHO05D005705 4.9e-14 81.6 82 51.2
ATR0213G026 Amborella trichopoda HOM05D004730 ORTHO05D005705 8.3e-14 80.9 108 45.4
Lj7C501G3 Lonicera japonica HOM05D004730 ORTHO05D005705 1.1e-13 80.5 86 54.7
Sabra02G0142200 Salix brachista HOM05D004730 ORTHO05D005705 1.1e-13 80.5 93 50.5
AUR62023469 Chenopodium quinoa HOM05D004730 ORTHO05D005705 1.8e-13 79.7 82 50.0
ClCG06G002220 Citrullus lanatus HOM05D004730 ORTHO05D005705 1.8e-13 79.7 87 50.6
Thhalv10005894m.g Eutrema salsugineum HOM05D004730 ORTHO05D005705 1.8e-13 79.7 81 54.3
Peaxi162Scf00403g00522 Petunia axillaris HOM05D004730 ORTHO05D005705 1.8e-13 79.7 88 50.0
Potri.002G170100 Populus trichocarpa HOM05D004730 ORTHO05D005705 1.8e-13 79.7 93 49.5
Aa31LG1G27820 Aethionema arabicum HOM05D004730 ORTHO05D005705 2.4e-13 79.3 82 52.4
THA.LOC104817359 Tarenaya hassleriana HOM05D004730 ORTHO05D005705 2.4e-13 79.3 82 52.4
Atru.chr5.659 Acer truncatum HOM05D004730 ORTHO05D005705 3.2e-13 79.0 87 55.2
Sp5g01680 Schrenkiella parvula HOM05D004730 ORTHO05D005705 4.1e-13 78.6 81 51.9
ATR0213G028 Amborella trichopoda HOM05D004730 ORTHO05D005705 5.4e-13 78.2 107 44.9
PSO210G5634 Papaver somniferum HOM05D004730 ORTHO05D005705 5.4e-13 78.2 87 57.5
Lj3g0019549 Lotus japonicus HOM05D004730 ORTHO05D005705 9.2e-13 77.4 95 47.4
PSO339G2575 Papaver somniferum HOM05D004730 ORTHO05D005705 1.6e-12 76.6 90 54.4
Medtr3g018770 Medicago truncatula HOM05D004730 ORTHO05D005705 2.0e-12 76.3 83 50.6
PGR031G3931 Punica granatum HOM05D004730 ORTHO05D005705 2.0e-12 76.3 99 49.5
Aa31LG10G15710 Aethionema arabicum HOM05D004730 ORTHO05D005705 2.7e-12 75.9 77 54.5
MELO3C022308.2 Cucumis melo HOM05D004730 ORTHO05D005705 2.7e-12 75.9 87 48.3
Cpa.g.sc96.6 Carica papaya HOM05D004730 ORTHO05D005705 3.5e-12 75.5 86 52.3
MD01G1079900 Malus domestica HOM05D004730 ORTHO05D005705 3.5e-12 75.5 88 50.0
CsaV3_6G008300 Cucumis sativus L. HOM05D004730 ORTHO05D005705 4.5e-12 75.1 87 47.1
Eucgr.D02369 Eucalyptus grandis HOM05D004730 ORTHO05D005705 5.9e-12 74.7 86 52.3
Duzib133G1016 Durio zibethinus HOM05D004730 ORTHO05D005705 7.8e-12 74.3 93 50.5
unitig_62.g23797 Utricularia gibba HOM05D004730 ORTHO05D005705 7.8e-12 74.3 70 50.0
AL5G44220 Arabidopsis lyrata HOM05D004730 ORTHO05D005705 1.0e-11 73.9 90 48.9
AT3G61710 Arabidopsis thaliana HOM05D004730 ORTHO05D005705 1.0e-11 73.9 91 48.4
Os03g0644000 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 1.3e-11 73.6 87 51.7
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 2.9e-11 72.4 83 48.2
Gohir.D08G146500 Gossypium hirsutum HOM05D004730 ORTHO05D005705 2.9e-11 72.4 90 50.0
Gorai.004G152100 Gossypium raimondii HOM05D004730 ORTHO05D005705 2.9e-11 72.4 90 50.0
CARHR172020 Cardamine hirsuta HOM05D004730 ORTHO05D005705 3.9e-11 72.0 82 53.7
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 5.0e-11 71.6 83 48.2
SMO114G0122 Selaginella moellendorffii HOM05D004730 ORTHO05D005705 8.6e-11 70.9 78 50.0
Psat5g217520 Pisum sativum HOM05D004730 ORTHO05D005705 1.1e-10 70.5 82 48.8
Gohir.A08G125600 Gossypium hirsutum HOM05D004730 ORTHO05D005705 1.5e-10 70.1 90 47.8
Ah.05g179630 Amaranthus hybridus HOM05D004730 ORTHO05D005705 1.9e-10 69.7 82 47.6
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 2.5e-10 69.3 72 52.8
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.5e-10 69.3 72 52.8
BolC6t37951H Brassica oleracea HOM05D004730 ORTHO05D005705 2.5e-10 69.3 72 52.8
CANSAT56G1965 Cannabis sativa HOM05D004730 ORTHO05D005705 2.5e-10 69.3 87 48.3
Prupe.2G187200 Prunus persica HOM05D004730 ORTHO05D005705 2.5e-10 69.3 88 52.3
Sc01g0002740 Simmondsia chinensis HOM05D004730 ORTHO05D005705 2.5e-10 69.3 82 42.7
Phvul.005G029900 Phaseolus vulgaris HOM05D004730 ORTHO05D005705 3.3e-10 68.9 81 45.7
SEGI_06994 Sequoiadendron giganteum HOM05D004730 ORTHO05D005705 3.3e-10 68.9 114 37.7
BcaC08g45152 Brassica carinata HOM05D004730 ORTHO05D005705 4.3e-10 68.6 83 47.0
C06p27700 Brassica napus HOM05D004730 ORTHO05D005705 4.3e-10 68.6 83 47.0
C06p27860 Brassica napus HOM05D004730 ORTHO05D005705 4.3e-10 68.6 83 47.0
BolC6t37941H Brassica oleracea HOM05D004730 ORTHO05D005705 4.3e-10 68.6 83 47.0
Ca_26857_v3 Cicer arietinum L. HOM05D004730 ORTHO05D005705 4.3e-10 68.6 77 50.6
MD07G1148700 Malus domestica HOM05D004730 ORTHO05D005705 5.6e-10 68.2 87 49.4
TPR.G9866 Trifolium pratense HOM05D004730 ORTHO05D005705 5.6e-10 68.2 71 52.1
PGR031G3051 Punica granatum HOM05D004730 ORTHO05D005705 7.3e-10 67.8 99 45.5
VMungo1080G1812 Vigna mungo HOM05D004730 ORTHO05D005705 1.6e-09 66.6 81 45.7
FAN01G1335 Fragaria x ananassa HOM05D004730 ORTHO05D005705 2.8e-09 65.9 80 48.8
MBI01_g41444_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 8.0e-09 64.3 62 56.5
arahy.Tifrunner.gnm1.ann1.DU0G1C Arachis hypogaea HOM05D004730 ORTHO05D005705 1.0e-08 63.9 89 42.7
Glyma.11G153900 Glycine max HOM05D004730 ORTHO05D005705 1.0e-08 63.9 83 45.8
Os03g0258500 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 1.0e-08 63.9 67 49.3
FvH4_7g16330 Fragaria vesca HOM05D004730 ORTHO05D005705 1.4e-08 63.5 80 48.8
FAN06G3857 Fragaria x ananassa HOM05D004730 ORTHO05D005705 1.4e-08 63.5 80 48.8
FAN06G4548 Fragaria x ananassa HOM05D004730 ORTHO05D005705 1.4e-08 63.5 80 48.8
Os01g0681400 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 1.4e-08 63.5 71 47.9
arahy.Tifrunner.gnm1.ann1.EBD5YY Arachis hypogaea HOM05D004730 ORTHO05D005705 1.8e-08 63.2 89 42.7
Glyma.04G141000 Glycine max HOM05D004730 ORTHO05D005705 2.3e-08 62.8 81 43.2
TWI23G0180 Tripterygium wilfordii HOM05D004730 ORTHO05D005705 4.0e-08 62.0 97 45.4
FAN10G2003 Fragaria x ananassa HOM05D004730 ORTHO05D005705 5.2e-08 61.6 80 47.5
FAN10G3709 Fragaria x ananassa HOM05D004730 ORTHO05D005705 5.2e-08 61.6 80 47.5
TWI59G0293 Tripterygium wilfordii HOM05D004730 ORTHO05D005705 5.2e-08 61.6 100 44.0
FAN03G1043 Fragaria x ananassa HOM05D004730 ORTHO05D005705 6.8e-08 61.2 80 47.5
Pp3c1_21510 Physcomitrium patens HOM05D004730 ORTHO05D005705 8.9e-08 60.8 88 40.9
Sed0022953 Sechium edule HOM05D004730 ORTHO05D005705 1.5e-07 60.1 87 44.8
MBI01_g34153_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 5.8e-07 58.2 49 59.2
HanXRQChr11g0353001 Helianthus annuus HOM05D004730 ORTHO05D005705 9.8e-07 57.4 67 52.2
Zm00001eb142950 Zea mays HOM05D004730 ORTHO05D005705 9.8e-07 57.4 81 43.2
AUR62004484 Chenopodium quinoa HOM05D004730 ORTHO05D005705 1.3e-06 57.0 82 40.2
RcHm_v2.0_Chr1g0359341 Rosa chinensis HOM05D004730 ORTHO05D005705 6.4e-06 54.7 87 44.8


User provided reference genes

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