Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0317 Ceratophyllum demersum HOM05D002087 ORTHO05D002101 2.2e-45 185.3 94 100.0
CDE02G3647 Ceratophyllum demersum HOM05D002087 ORTHO05D002101 9.9e-38 159.8 98 84.7
BcaB01g02442 Brassica carinata HOM05D002087 ORTHO05D002101 6.7e-10 67.4 95 42.1
BcaC01g06764 Brassica carinata HOM05D002087 ORTHO05D002101 6.7e-10 67.4 95 42.1
Oeu011462.1 Olea europaea HOM05D002087 ORTHO05D002101 6.7e-10 67.4 93 41.9
Actinidia14332 Actinidia chinensis HOM05D002087 ORTHO05D002101 8.8e-10 67.0 91 42.9
Sp1g01800 Schrenkiella parvula HOM05D002087 ORTHO05D002101 1.1e-09 66.6 99 45.5
A02p24640 Brassica napus HOM05D002087 ORTHO05D002101 1.5e-09 66.2 101 42.6
Oeu046672.1 Olea europaea HOM05D002087 ORTHO05D002101 2.0e-09 65.9 93 40.9
Atru.chr6.1998 Acer truncatum HOM05D002087 ORTHO05D002101 2.5e-09 65.5 93 46.2
MBI19_g43555_MAGBIO Magnolia biondii HOM05D002087 ORTHO05D002101 2.5e-09 65.5 98 37.8
MBI19_g46347_MAGBIO Magnolia biondii HOM05D002087 ORTHO05D002101 2.5e-09 65.5 98 37.8
CSS0043962 Camellia sinensis var. sinensis HOM05D002087 ORTHO05D002101 4.3e-09 64.7 92 40.2
AL1G12210 Arabidopsis lyrata HOM05D002087 ORTHO05D002101 5.7e-09 64.3 98 41.8
C02p38880 Brassica napus HOM05D002087 ORTHO05D002101 5.7e-09 64.3 101 41.6
SalBow3G0131 Salvia bowleyana HOM05D002087 ORTHO05D002101 5.7e-09 64.3 95 38.9
BcaC03g16117 Brassica carinata HOM05D002087 ORTHO05D002101 7.4e-09 63.9 101 41.6
TAR362G1222 Trochodendron aralioides HOM05D002087 ORTHO05D002101 9.7e-09 63.5 98 41.8
Aa31LG5G2020 Aethionema arabicum HOM05D002087 ORTHO05D002101 1.3e-08 63.2 96 41.7
Ah.15g093120 Amaranthus hybridus HOM05D002087 ORTHO05D002101 1.7e-08 62.8 95 41.1
BcaB01g02443 Brassica carinata HOM05D002087 ORTHO05D002101 1.7e-08 62.8 95 40.0
Hma1.2p1_0494F.1_g165250 Hydrangea macrophylla HOM05D002087 ORTHO05D002101 1.7e-08 62.8 94 39.4
Dinv29766 Davidia involucrata HOM05D002087 ORTHO05D002101 2.2e-08 62.4 95 40.0
Rhsim13G0009300 Rhododendron simsii HOM05D002087 ORTHO05D002101 2.2e-08 62.4 94 43.6
Sp6g02260 Schrenkiella parvula HOM05D002087 ORTHO05D002101 2.8e-08 62.0 95 40.0
Aqoxy2G02929 Aquilegia oxysepala HOM05D002087 ORTHO05D002101 3.7e-08 61.6 96 39.6
Nn4g25778 Nelumbo nucifera HOM05D002087 ORTHO05D002101 3.7e-08 61.6 90 36.7
Carub.0001s0193 Capsella rubella HOM05D002087 ORTHO05D002101 4.8e-08 61.2 99 43.4
CARHR002140 Cardamine hirsuta HOM05D002087 ORTHO05D002101 6.3e-08 60.8 98 40.8
Thhalv10029091m.g Eutrema salsugineum HOM05D002087 ORTHO05D002101 6.3e-08 60.8 102 39.2
Nitab4.5_0002820g0100 Nicotiana tabacum HOM05D002087 ORTHO05D002101 6.3e-08 60.8 94 41.5
TAR636G0371 Trochodendron aralioides HOM05D002087 ORTHO05D002101 6.3e-08 60.8 95 45.3
AT1G02820 Arabidopsis thaliana HOM05D002087 ORTHO05D002101 8.2e-08 60.5 96 43.8
Cfa005900 Carpinus fangiana HOM05D002087 ORTHO05D002101 8.2e-08 60.5 98 40.8
AUR62008681 Chenopodium quinoa HOM05D002087 ORTHO05D002101 8.2e-08 60.5 92 38.0
Manes.03G197100 Manihot esculenta HOM05D002087 ORTHO05D002101 1.1e-07 60.1 94 41.5
Nn3g21519 Nelumbo nucifera HOM05D002087 ORTHO05D002101 1.1e-07 60.1 41 65.9
Peaxi162Scf00001g00412 Petunia axillaris HOM05D002087 ORTHO05D002101 1.1e-07 60.1 92 39.1
EL10Ac7g17530 Beta vulgaris HOM05D002087 ORTHO05D002101 1.4e-07 59.7 92 40.2
PGSC0003DMG400031788 Solanum tuberosum HOM05D002087 ORTHO05D002101 1.4e-07 59.7 96 36.5
GSVIVG01028033001 Vitis vinifera HOM05D002087 ORTHO05D002101 1.4e-07 59.7 98 41.8
Aqoxy5G00766 Aquilegia oxysepala HOM05D002087 ORTHO05D002101 1.8e-07 59.3 89 39.3
AT4G02380 Arabidopsis thaliana HOM05D002087 ORTHO05D002101 1.8e-07 59.3 99 38.4
CARHR250570 Cardamine hirsuta HOM05D002087 ORTHO05D002101 1.8e-07 59.3 102 40.2
Sopen09g030030 Solanum pennellii HOM05D002087 ORTHO05D002101 1.8e-07 59.3 96 37.5
AL6G50740 Arabidopsis lyrata HOM05D002087 ORTHO05D002101 2.4e-07 58.9 95 36.8
AUR62025562 Chenopodium quinoa HOM05D002087 ORTHO05D002101 2.4e-07 58.9 92 38.0
Rhsim01G0286200 Rhododendron simsii HOM05D002087 ORTHO05D002101 2.4e-07 58.9 95 40.0
Thecc.01G302000 Theobroma cacao HOM05D002087 ORTHO05D002101 2.4e-07 58.9 92 40.2
BcaB05g23621 Brassica carinata HOM05D002087 ORTHO05D002101 3.1e-07 58.5 95 38.9
Carub.0006s3478 Capsella rubella HOM05D002087 ORTHO05D002101 3.1e-07 58.5 95 37.9
DCAR_005788 Daucus carota HOM05D002087 ORTHO05D002101 3.1e-07 58.5 91 39.6
Migut.D00143 Erythranthe guttata HOM05D002087 ORTHO05D002101 3.1e-07 58.5 94 39.4
vmacro15151 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 3.1e-07 58.5 95 36.8
CSS0024122 Camellia sinensis var. sinensis HOM05D002087 ORTHO05D002101 4.1e-07 58.2 90 41.1
CSS0040472 Camellia sinensis var. sinensis HOM05D002087 ORTHO05D002101 4.1e-07 58.2 90 41.1
Cc01_g20970 Coffea canephora HOM05D002087 ORTHO05D002101 4.1e-07 58.2 100 41.0
Haze_04952 Corylus avellana HOM05D002087 ORTHO05D002101 4.1e-07 58.2 98 40.8
Peaxi162Scf00140g01214 Petunia axillaris HOM05D002087 ORTHO05D002101 4.1e-07 58.2 97 41.2
TAR633G2750 Trochodendron aralioides HOM05D002087 ORTHO05D002101 4.1e-07 58.2 99 38.4
vmacro02442 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 4.1e-07 58.2 98 39.8
Actinidia25806 Actinidia chinensis HOM05D002087 ORTHO05D002101 5.3e-07 57.8 96 39.6
Ciclev10023029m.g Citrus clementina HOM05D002087 ORTHO05D002101 5.3e-07 57.8 99 39.4
Gorai.004G090700 Gossypium raimondii HOM05D002087 ORTHO05D002101 5.3e-07 57.8 97 40.2
Dinv19683 Davidia involucrata HOM05D002087 ORTHO05D002101 6.9e-07 57.4 94 38.3
Eucgr.H01103 Eucalyptus grandis HOM05D002087 ORTHO05D002101 6.9e-07 57.4 101 38.6
Hund18179 Selenicereus undatus HOM05D002087 ORTHO05D002101 6.9e-07 57.4 93 39.8
unitig_0.g671 Utricularia gibba HOM05D002087 ORTHO05D002101 6.9e-07 57.4 93 43.0
Eucgr.H01104 Eucalyptus grandis HOM05D002087 ORTHO05D002101 9.1e-07 57.0 100 38.0
Gohir.A08G076800 Gossypium hirsutum HOM05D002087 ORTHO05D002101 9.1e-07 57.0 97 39.2
Solyc09g075210.3 Solanum lycopersicum HOM05D002087 ORTHO05D002101 9.1e-07 57.0 94 36.2
MELO3C015995.2 Cucumis melo HOM05D002087 ORTHO05D002101 1.2e-06 56.6 109 36.7
QL12p028285 Quercus lobata HOM05D002087 ORTHO05D002101 1.2e-06 56.6 99 40.4
unitig_0.g670 Utricularia gibba HOM05D002087 ORTHO05D002101 1.2e-06 56.6 96 39.6
Cpa.g.sc9.251 Carica papaya HOM05D002087 ORTHO05D002101 1.5e-06 56.2 100 34.0
Gohir.D08G086400 Gossypium hirsutum HOM05D002087 ORTHO05D002101 1.5e-06 56.2 97 40.2
HanXRQChr15g0465581 Helianthus annuus HOM05D002087 ORTHO05D002101 1.5e-06 56.2 93 35.5
Nitab4.5_0000116g0500 Nicotiana tabacum HOM05D002087 ORTHO05D002101 1.5e-06 56.2 96 38.5
Peaxi162Scf00399g00518 Petunia axillaris HOM05D002087 ORTHO05D002101 1.5e-06 56.2 96 37.5
CAN.G472.12 Capsicum annuum HOM05D002087 ORTHO05D002101 2.0e-06 55.8 95 35.8
MELO3C017950.2 Cucumis melo HOM05D002087 ORTHO05D002101 2.0e-06 55.8 79 38.0
THA.LOC104801278 Tarenaya hassleriana HOM05D002087 ORTHO05D002101 2.0e-06 55.8 99 42.4
Actinidia26754 Actinidia chinensis HOM05D002087 ORTHO05D002101 2.6e-06 55.5 90 38.9
CiPaw.07G110400 Carya illinoinensis HOM05D002087 ORTHO05D002101 2.6e-06 55.5 101 42.6
Thhalv10009185m.g Eutrema salsugineum HOM05D002087 ORTHO05D002101 2.6e-06 55.5 98 36.7
Gohir.A08G076700 Gossypium hirsutum HOM05D002087 ORTHO05D002101 2.6e-06 55.5 97 40.2
Gohir.D08G086300 Gossypium hirsutum HOM05D002087 ORTHO05D002101 2.6e-06 55.5 97 39.2
Gorai.004G090800 Gossypium raimondii HOM05D002087 ORTHO05D002101 2.6e-06 55.5 97 39.2
Duzib138G0723 Durio zibethinus HOM05D002087 ORTHO05D002101 3.4e-06 55.1 95 37.9
Lsat_1_v5_gn_9_5460 Lactuca sativa HOM05D002087 ORTHO05D002101 3.4e-06 55.1 95 33.7
TAR365G0110 Trochodendron aralioides HOM05D002087 ORTHO05D002101 3.4e-06 55.1 101 39.6
A10p01480 Brassica napus HOM05D002087 ORTHO05D002101 4.5e-06 54.7 99 41.4
TAR365G0362 Trochodendron aralioides HOM05D002087 ORTHO05D002101 4.5e-06 54.7 100 39.0
Ah.08g213310 Amaranthus hybridus HOM05D002087 ORTHO05D002101 5.9e-06 54.3 94 37.2
Ciclev10006308m.g Citrus clementina HOM05D002087 ORTHO05D002101 5.9e-06 54.3 97 38.1
COL.COLO4_23330 Corchorus olitorius HOM05D002087 ORTHO05D002101 5.9e-06 54.3 95 37.9
Hund05435 Selenicereus undatus HOM05D002087 ORTHO05D002101 5.9e-06 54.3 90 37.8
Gohir.D08G138900 Gossypium hirsutum HOM05D002087 ORTHO05D002101 7.7e-06 53.9 96 37.5
Gorai.004G142600 Gossypium raimondii HOM05D002087 ORTHO05D002101 7.7e-06 53.9 96 37.5
Solyc06g009140.3 Solanum lycopersicum HOM05D002087 ORTHO05D002101 7.7e-06 53.9 93 38.7
Thecc.04G287100 Theobroma cacao HOM05D002087 ORTHO05D002101 7.7e-06 53.9 101 41.6


User provided reference genes

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