Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 0.0e+00 1716.4 885 100.0
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 4.2e-255 885.2 951 51.8
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 2.2e-240 836.3 932 49.4
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 2.9e-232 809.3 945 48.4
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 6.8e-229 798.1 940 47.6
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 9.1e-226 787.7 938 47.8
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 2.7e-225 786.2 938 47.7
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 1.3e-224 783.9 950 46.3
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 3.6e-222 775.8 950 47.2
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 4.7e-222 775.4 947 47.7
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 8.0e-222 774.6 943 46.4
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 1.4e-221 773.9 951 45.4
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 8.9e-221 771.2 945 45.8
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 2.6e-220 769.6 939 46.0
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 7.5e-220 768.1 937 45.9
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 7.5e-220 768.1 948 46.0
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 9.8e-220 767.7 951 46.1
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 1.7e-219 766.9 948 47.4
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 3.7e-219 765.8 935 45.1
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 4.9e-219 765.4 940 45.7
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 1.1e-218 764.2 950 45.8
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 1.8e-218 763.5 935 45.2
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 2.4e-218 763.1 954 44.5
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 2.4e-218 763.1 946 45.2
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 3.2e-218 762.7 939 45.4
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 1.6e-217 760.4 944 45.0
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.7e-217 759.6 951 45.0
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 3.5e-217 759.2 939 46.4
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 4.5e-217 758.8 929 45.4
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 5.9e-217 758.4 965 45.1
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 5.9e-217 758.4 923 46.0
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 1.0e-216 757.7 957 45.8
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.9e-216 756.1 952 45.0
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 2.9e-216 756.1 968 45.2
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 3.9e-216 755.7 950 45.2
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 1.5e-215 753.8 952 45.0
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 1.5e-215 753.8 954 45.3
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 1.9e-215 753.4 923 45.3
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 4.3e-215 752.3 923 45.8
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 9.5e-215 751.1 935 45.3
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 1.6e-214 750.4 944 44.5
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 2.1e-214 750.0 924 45.3
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 3.6e-214 749.2 923 45.2
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 1.0e-213 747.7 956 45.2
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.4e-213 747.3 952 44.6
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 1.8e-213 746.9 942 44.3
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 5.2e-213 745.3 763 51.6
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 2.0e-212 743.4 935 45.1
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 2.6e-212 743.0 926 44.7
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 4.4e-212 742.3 948 44.4
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 2.2e-211 740.0 939 44.2
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 8.3e-211 738.0 920 45.3
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 1.1e-210 737.6 946 45.0
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 1.1e-210 737.6 946 45.0
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 1.9e-210 736.9 954 44.8
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 5.4e-210 735.3 933 44.2
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 6.0e-209 731.9 926 44.6
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 1.3e-208 730.7 936 44.8
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 3.9e-208 729.2 921 44.8
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 3.9e-208 729.2 907 46.5
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 6.6e-208 728.4 940 43.6
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 5.6e-207 725.3 931 45.2
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 5.6e-207 725.3 936 44.0
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 1.2e-206 724.2 915 44.5
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 3.6e-206 722.6 961 43.4
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 1.8e-205 720.3 933 44.3
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 1.8e-205 720.3 936 44.4
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 6.8e-205 718.4 953 43.1
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 1.5e-204 717.2 947 44.5
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 1.5e-204 717.2 933 43.8
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 1.5e-204 717.2 941 43.7
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 5.8e-204 715.3 949 43.4
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 2.2e-203 713.4 942 43.9
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 1.9e-202 710.3 931 44.8
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 2.7e-201 706.4 942 43.5
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 4.3e-199 699.1 1001 42.2
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 3.1e-197 693.0 782 47.7
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 1.3e-195 687.6 904 42.4
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 6.4e-195 685.3 935 42.4
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 2.4e-194 683.3 936 43.7
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 1.6e-193 680.6 1005 40.8
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 1.0e-192 677.9 919 41.3
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 1.5e-191 674.1 919 41.3
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 4.0e-189 666.0 935 41.6
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 4.9e-187 659.1 855 44.6
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 4.3e-183 646.0 769 46.6
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 1.6e-182 644.0 686 50.3
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 6.2e-182 642.1 918 40.6
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 9.3e-170 601.7 729 46.5
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 1.2e-169 601.3 704 46.0
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.1e-167 594.7 691 48.3
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 9.3e-162 575.1 883 38.5
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 9.0e-157 558.5 948 38.0
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 4.3e-151 539.7 884 37.3
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 2.9e-147 526.9 944 37.4
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 1.6e-145 521.2 646 46.9
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 4.1e-125 453.4 735 38.8
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.3e-115 421.8 878 33.5
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 1.5e-114 418.3 490 44.3
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 8.8e-112 409.1 904 33.2
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 4.4e-103 380.2 887 31.5
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 7.8e-84 316.2 471 42.3
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.1e-81 308.1 435 42.5
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 6.8e-80 303.1 415 39.0
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.1e-77 295.8 382 44.5
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 2.3e-75 288.1 457 40.3
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.4e-55 221.1 406 38.2
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.9e-50 205.3 259 45.2
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.8e-32 145.6 192 39.1
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 1.4e-24 119.4 113 54.0
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.1e-24 116.7 118 50.8
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 2.9e-22 111.7 123 53.7
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 7.9e-20 103.6 128 43.8
MCO15G701 Micromonas commoda HOM05D004953 ORTHO05D006193 1.0e-14 86.7 792 21.2
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.2e-14 85.5 119 39.5
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 9.4e-13 80.1 150 36.7
FvH4_7g13151 Fragaria vesca HOM05D004953 ORTHO05D006193 4.7e-12 77.8 68 55.9
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-11 76.6 339 25.1
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.0e-11 75.1 333 24.9
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 8.8e-11 73.6 187 31.6
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 7.5e-10 70.5 118 38.1
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 1.7e-09 69.3 205 30.2
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 4.8e-09 67.8 119 36.1
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 6.3e-09 67.4 57 59.6
CSS0040358 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 9.1e-08 63.5 57 57.9
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 1.6e-07 62.8 75 42.7
FvH4_4g15182 Fragaria vesca HOM05D004953 ORTHO05D006193 2.7e-07 62.0 46 58.7


User provided reference genes

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