Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.3e-172 609.8 331 100.0
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.1e-143 512.7 331 86.4
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 1.6e-98 363.6 334 66.5
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 2.3e-97 359.8 339 66.1
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 2.5e-96 356.3 338 65.7
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 2.5e-96 356.3 326 67.5
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 4.3e-96 355.5 336 66.1
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 4.8e-95 352.1 332 63.9
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 4.1e-94 349.0 334 65.6
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 3.8e-92 342.4 335 64.8
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 4.2e-91 339.0 340 63.2
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 7.2e-91 338.2 344 63.1
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 2.1e-90 336.7 333 64.0
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 1.4e-89 334.0 336 62.5
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 5.1e-89 332.0 333 63.4
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 3.7e-87 325.9 293 67.2
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 4.8e-87 325.5 334 63.2
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 4.8e-87 325.5 289 68.5
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 1.4e-86 323.9 331 63.7
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 1.4e-86 323.9 351 59.5
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 4.1e-86 322.4 337 61.4
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 5.3e-86 322.0 349 61.3
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 1.5e-85 320.5 336 62.5
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 1.0e-84 317.8 362 59.1
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 1.0e-84 317.8 298 66.4
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 2.9e-84 316.2 337 61.7
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.1e-83 314.3 298 65.8
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 1.4e-83 313.9 335 59.7
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 7.2e-83 311.6 370 57.0
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 1.6e-82 310.5 300 64.0
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 2.1e-82 310.1 339 61.7
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 4.7e-82 308.9 292 65.4
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 6.1e-82 308.5 325 60.9
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 7.9e-82 308.1 344 58.7
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 3.0e-81 306.2 297 64.6
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 6.7e-81 305.1 347 58.8
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 2.0e-80 303.5 339 59.0
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 2.0e-80 303.5 334 59.3
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 4.4e-80 302.4 295 63.7
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 7.4e-80 301.6 335 59.4
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 2.2e-79 300.1 322 60.9
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 3.7e-79 299.3 291 64.6
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 3.7e-79 299.3 346 56.9
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 3.7e-79 299.3 351 57.8
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 6.3e-79 298.5 287 65.2
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 4.1e-78 295.8 347 59.1
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 1.6e-77 293.9 298 62.4
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 2.0e-77 293.5 323 59.8
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 4.5e-77 292.4 331 59.8
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.3e-76 290.8 325 59.1
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 1.3e-76 290.8 331 57.4
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 3.2e-75 286.2 256 65.6
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 5.5e-75 285.4 343 57.7
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 7.2e-75 285.0 303 62.0
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 2.1e-74 283.5 294 59.9
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 3.6e-74 282.7 335 59.7
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 8.0e-74 281.6 371 53.6
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 2.3e-73 280.0 368 51.6
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 2.3e-73 280.0 290 59.7
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 3.0e-73 279.6 294 58.8
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 8.8e-73 278.1 336 54.8
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 1.5e-72 277.3 328 57.9
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 1.5e-72 277.3 283 61.8
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 3.3e-72 276.2 328 56.1
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 3.3e-72 276.2 342 53.8
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 9.7e-72 274.6 368 50.8
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 2.2e-71 273.5 294 61.6
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 6.3e-71 271.9 335 56.4
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 5.3e-70 268.9 294 59.5
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 2.0e-69 266.9 293 60.1
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 4.5e-69 265.8 337 52.8
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.0e-68 264.6 326 54.9
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.3e-68 264.2 288 56.9
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 1.3e-68 264.2 300 59.3
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 1.7e-68 263.8 261 63.6
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 5.0e-68 262.3 321 56.1
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 6.5e-68 261.9 338 51.5
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.5e-67 260.0 349 54.4
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 1.2e-66 257.7 290 56.2
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 1.0e-65 254.6 356 50.8
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 1.4e-65 254.2 308 54.5
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 6.8e-65 251.9 304 56.2
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 2.0e-64 250.4 326 53.7
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 4.4e-64 249.2 241 64.7
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 1.4e-62 244.2 297 55.6
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 3.1e-62 243.0 331 49.2
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 2.7e-61 240.0 273 56.8
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 5.0e-60 235.7 329 51.7
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.5e-59 233.4 271 55.7
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.2e-59 233.0 271 55.4
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 4.2e-59 232.6 336 50.9
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 7.2e-59 231.9 336 50.6
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 6.1e-58 228.8 275 55.3
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 1.8e-57 227.3 368 46.2
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.0e-57 226.5 271 55.0
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 1.2e-56 224.6 338 49.1
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 4.4e-56 222.6 329 48.0
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 4.4e-56 222.6 329 48.0
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 9.8e-56 221.5 359 46.2
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 1.3e-55 221.1 326 50.0
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 1.7e-55 220.7 362 46.7
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 3.7e-55 219.5 212 60.8
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 6.3e-55 218.8 243 55.6
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 6.3e-55 218.8 284 52.5
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 8.3e-55 218.4 217 61.8
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 9.2e-54 214.9 313 50.8
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 9.2e-54 214.9 231 57.6
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 9.2e-54 214.9 251 53.4
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 2.0e-53 213.8 346 47.4
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.5e-51 206.8 305 49.2
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 5.6e-51 205.7 198 59.1
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 4.7e-50 202.6 189 62.4
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 6.1e-50 202.2 335 46.3
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 3.0e-49 199.9 196 59.2
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 8.9e-49 198.4 200 57.0
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 8.9e-49 198.4 200 57.0
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 1.3e-47 194.5 348 44.5
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 1.4e-46 191.0 379 43.0
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 5.4e-46 189.1 333 44.4
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 2.7e-45 186.8 239 55.2
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.3e-44 183.7 315 45.4
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 5.0e-44 182.6 343 39.7
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 7.3e-43 178.7 186 63.4
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 2.1e-42 177.2 327 43.7
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 2.3e-41 173.7 323 45.2
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 7.0e-38 162.2 204 56.4
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.6e-37 161.0 161 58.4
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 4.6e-37 159.5 318 39.3
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 6.0e-37 159.1 272 44.9
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 1.3e-36 157.9 319 39.2
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 1.2e-34 151.4 476 34.0
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 3.1e-33 146.7 145 59.3
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 9.8e-32 141.7 292 44.2
BcaC06g34635 Brassica carinata HOM05D004913 ORTHO05D006150 3.1e-25 120.2 204 46.6
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 6.0e-21 105.9 136 44.9
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.3e-20 104.0 171 39.8
Ah.13g071550 Amaranthus hybridus HOM05D004913 ORTHO05D006150 1.3e-15 88.2 95 56.8
Zm00001eb034960 Zea mays HOM05D004913 ORTHO05D006150 1.7e-12 77.8 86 54.7
Atru.chr4.2281 Acer truncatum HOM05D000979 ORTHO05D003182 4.0e-09 66.6 95 53.7
GSVIVG01034858001 Vitis vinifera HOM05D004913 ORTHO05D006150 4.5e-08 63.2 50 64.0
FAN16G0422 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.9e-07 60.5 56 67.9
Zm00001eb060940 Zea mays HOM05D004913 ORTHO05D006150 6.4e-07 59.3 60 65.0
MCO11G351 Micromonas commoda HOM05D004913 ORTHO05D006150 5.4e-06 56.2 167 32.3


User provided reference genes

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