Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 9.1e-93 343.6 177 100.0
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 6.0e-52 208.0 169 63.3
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 4.7e-49 198.4 170 61.8
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 2.6e-47 192.6 171 58.5
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 1.7e-46 189.9 169 57.4
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 2.9e-46 189.1 166 61.4
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 3.8e-46 188.7 171 57.3
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 4.9e-46 188.3 169 57.4
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.4e-45 186.8 174 59.8
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 2.4e-45 186.0 169 57.4
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 5.4e-45 184.9 169 57.4
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 5.4e-45 184.9 163 58.3
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 9.3e-45 184.1 169 57.4
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 1.2e-44 183.7 169 58.6
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 1.2e-44 183.7 166 57.8
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 1.6e-44 183.3 169 56.8
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 2.7e-44 182.6 170 56.5
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 2.7e-44 182.6 169 55.0
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 4.6e-44 181.8 166 57.2
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 6.0e-44 181.4 161 63.4
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 6.0e-44 181.4 166 57.8
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 7.8e-44 181.0 170 55.3
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 7.8e-44 181.0 170 58.8
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 1.0e-43 180.6 169 56.2
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 1.0e-43 180.6 169 61.5
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 1.3e-43 180.3 169 55.0
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 1.3e-43 180.3 169 56.2
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.3e-43 179.5 173 57.8
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 2.3e-43 179.5 169 56.2
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 2.5e-42 176.0 168 59.5
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 5.6e-42 174.9 171 56.7
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 7.3e-42 174.5 165 60.0
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 9.6e-42 174.1 161 59.6
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.3e-41 173.7 176 56.2
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 1.6e-41 173.3 169 53.8
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 2.1e-41 172.9 163 57.7
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 2.8e-41 172.6 171 56.7
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 6.2e-41 171.4 171 54.4
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 6.2e-41 171.4 172 56.4
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 8.1e-41 171.0 171 54.4
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 8.1e-41 171.0 160 57.5
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 5.3e-40 168.3 152 59.9
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 1.2e-39 167.2 176 53.4
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 1.2e-39 167.2 163 57.1
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 1.5e-39 166.8 160 56.9
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 2.0e-39 166.4 175 53.7
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 3.4e-39 165.6 155 56.1
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 5.8e-39 164.9 170 52.9
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 5.8e-39 164.9 171 55.6
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 5.8e-39 164.9 169 55.0
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 5.8e-39 164.9 169 55.0
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 5.8e-39 164.9 169 55.0
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 5.8e-39 164.9 160 56.2
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 7.6e-39 164.5 172 52.3
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.3e-38 163.7 169 53.8
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 1.7e-38 163.3 170 55.3
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 2.2e-38 162.9 171 53.8
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 2.2e-38 162.9 172 52.9
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 2.2e-38 162.9 170 52.9
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.9e-38 162.5 171 52.0
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 4.9e-38 161.8 171 55.0
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 8.4e-38 161.0 164 52.4
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 8.4e-38 161.0 171 52.6
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 1.1e-37 160.6 171 55.0
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 2.4e-37 159.5 169 50.9
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 5.4e-37 158.3 141 60.3
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 5.4e-37 158.3 171 52.0
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 1.2e-36 157.1 171 51.5
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 2.1e-36 156.4 173 52.0
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 4.6e-36 155.2 170 54.7
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 2.3e-35 152.9 197 45.7
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.0e-35 152.5 167 54.5
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 5.1e-35 151.8 171 52.6
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 4.3e-34 148.7 173 52.6
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 7.3e-34 147.9 103 69.9
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 6.9e-32 141.4 80 82.5
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 1.7e-30 136.7 93 68.8
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 4.2e-29 132.1 91 68.1
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 3.5e-28 129.0 90 67.8
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 8.1e-25 117.9 114 52.6
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.3e-17 94.0 147 39.5
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 5.8e-15 85.1 124 41.1
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-14 82.0 68 52.9
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 6.1e-12 75.1 83 48.2
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.5e-10 70.5 79 43.0
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 3.3e-10 69.3 83 38.6
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 9.7e-10 67.8 113 41.6
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 9.0e-08 61.2 37 75.7
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 2.0e-07 60.1 37 75.7
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 2.6e-07 59.7 106 36.8


User provided reference genes

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