Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 4.5e-167 591.3 316 100.0
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 7.8e-95 351.3 327 57.2
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.1e-93 347.4 336 55.4
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.1e-93 347.4 336 55.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 5.2e-91 338.6 316 57.3
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.6e-86 321.6 331 54.1
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 4.8e-84 315.5 335 53.1
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.9e-81 306.2 316 51.6
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 2.4e-80 303.1 319 51.1
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 5.4e-80 302.0 316 51.3
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.2e-79 300.8 316 50.9
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.6e-79 300.4 318 50.9
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.6e-79 300.4 316 51.3
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.6e-79 300.4 315 50.8
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.6e-79 300.4 315 50.8
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 3.5e-79 299.3 319 50.5
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.0e-78 297.7 316 49.1
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.3e-78 296.6 316 50.0
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 3.9e-78 295.8 322 49.4
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 5.1e-78 295.4 316 49.1
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 6.6e-78 295.0 332 48.2
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 8.7e-78 294.7 312 50.0
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.9e-77 293.5 319 49.5
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 3.3e-77 292.7 319 50.5
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 4.3e-77 292.4 317 49.2
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 4.3e-77 292.4 316 49.1
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 4.3e-77 292.4 318 50.3
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 4.3e-77 292.4 316 49.7
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 5.6e-77 292.0 311 50.8
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 9.6e-77 291.2 337 47.2
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.3e-76 290.8 316 49.4
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.3e-76 290.8 316 49.4
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 2.1e-76 290.0 316 49.4
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 4.8e-76 288.9 318 48.7
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.4e-75 287.3 317 48.9
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.8e-75 287.0 317 48.3
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 3.1e-75 286.2 334 47.0
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 4.0e-75 285.8 316 48.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 5.3e-75 285.4 316 48.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 5.3e-75 285.4 317 47.9
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 6.9e-75 285.0 314 49.0
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 9.0e-75 284.6 316 49.4
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.2e-74 284.3 316 47.8
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.2e-74 284.3 316 49.4
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.5e-74 283.9 318 48.7
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 1.5e-74 283.9 319 48.6
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 2.6e-74 283.1 328 48.8
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.3e-73 280.8 316 48.1
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.7e-73 280.4 317 48.3
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 2.2e-73 280.0 335 46.0
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 2.9e-73 279.6 316 47.8
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.4e-73 278.5 319 48.3
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.4e-73 278.1 319 48.0
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 8.4e-73 278.1 316 47.2
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.4e-72 276.6 317 50.5
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.1e-72 275.0 319 48.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 9.3e-72 274.6 315 46.0
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 9.3e-72 274.6 319 47.6
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.2e-71 274.2 318 45.9
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.6e-71 273.9 315 45.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.1e-71 273.5 319 47.3
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.1e-71 273.5 319 47.6
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 4.6e-71 272.3 315 47.9
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 6.0e-71 271.9 332 47.0
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.9e-71 271.6 319 47.3
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.0e-70 271.2 298 50.7
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.0e-70 271.2 316 47.8
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.3e-70 270.8 313 47.6
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 3.9e-70 269.2 315 45.4
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 5.1e-70 268.9 317 47.0
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 5.1e-70 268.9 329 46.8
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 5.1e-70 268.9 316 48.1
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 6.7e-70 268.5 318 48.1
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.1e-69 267.7 330 46.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.3e-69 266.2 266 52.3
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 5.6e-69 265.4 325 46.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.8e-68 263.1 316 45.9
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 6.2e-68 261.9 319 47.0
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.1e-67 261.2 293 51.2
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.1e-67 259.6 284 50.0
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 3.1e-67 259.6 319 45.8
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 7.6e-66 255.0 332 45.5
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 2.2e-65 253.4 324 46.3
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 3.2e-64 249.6 317 42.0
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.8e-62 243.8 327 43.1
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.1e-61 241.1 316 45.3
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.5e-61 240.7 265 47.5
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.0e-58 230.3 298 44.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.9e-56 223.8 322 41.6
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.5e-55 219.5 238 49.6
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 7.9e-55 218.4 327 41.6
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 2.8e-52 209.9 324 41.4
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 6.5e-49 198.7 229 47.6
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 3.2e-48 196.4 317 37.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.9e-46 189.5 319 39.8
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 6.7e-46 188.7 179 54.7
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.6e-42 176.8 318 35.2
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 7.7e-42 175.3 297 39.4
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 8.8e-38 161.8 197 47.2
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 5.3e-35 152.5 186 44.1
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.8e-33 146.4 207 41.5
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 7.2e-32 142.1 200 42.5
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 3.7e-28 129.8 225 37.8
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 4.1e-27 126.3 162 42.0
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.5e-16 91.3 68 60.3
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.9e-16 90.9 271 26.9
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.2e-16 90.1 68 57.4
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 1.6e-15 87.8 95 50.5
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.7e-15 86.3 68 57.4


User provided reference genes

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