Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0383 Ceratophyllum demersum HOM05D002430 ORTHO05D001367 3.2e-241 838.2 479 100.0
CDE04G3369 Ceratophyllum demersum HOM05D002430 ORTHO05D001367 1.2e-160 570.5 519 69.4
Dinv14285 Davidia involucrata HOM05D002430 ORTHO05D001367 1.2e-41 175.3 568 33.1
Cfa020179 Carpinus fangiana HOM05D002430 ORTHO05D001367 1.1e-39 168.7 481 34.7
Aqoxy5G04013 Aquilegia oxysepala HOM05D002430 ORTHO05D001367 8.1e-35 152.5 403 36.7
TAR633G0652 Trochodendron aralioides HOM05D002430 ORTHO05D001367 8.1e-35 152.5 545 33.6
Hma1.2p1_0005F.1_g004170 Hydrangea macrophylla HOM05D002430 ORTHO05D001367 4.0e-34 150.2 572 32.3
Nn7g36021 Nelumbo nucifera HOM05D002430 ORTHO05D001367 1.7e-32 144.8 580 31.6
MSTRG.26087 Avicennia marina HOM05D002430 ORTHO05D001367 4.1e-31 140.2 536 31.7
Haze_19975 Corylus avellana HOM05D002430 ORTHO05D001367 7.8e-30 136.0 468 31.6
Nitab4.5_0000324g0240 Nicotiana tabacum HOM05D002430 ORTHO05D001367 3.0e-29 134.0 445 32.1
TAR623G0010 Trochodendron aralioides HOM05D002430 ORTHO05D001367 1.5e-28 131.7 593 34.1
Actinidia40435 Actinidia chinensis HOM05D002430 ORTHO05D001367 2.1e-27 127.9 552 32.4
Dinv43929 Davidia involucrata HOM05D002430 ORTHO05D001367 1.1e-26 125.6 538 32.0
Atru.chr8.1085 Acer truncatum HOM05D002430 ORTHO05D001367 2.0e-25 121.3 571 29.8
Gohir.D09G123800 Gossypium hirsutum HOM05D002430 ORTHO05D001367 4.4e-25 120.2 452 33.6
Gorai.006G142400 Gossypium raimondii HOM05D002430 ORTHO05D001367 7.6e-25 119.4 458 33.8
Nn2g15652 Nelumbo nucifera HOM05D002430 ORTHO05D001367 2.9e-24 117.5 568 29.6
Gohir.A09G127700 Gossypium hirsutum HOM05D002430 ORTHO05D001367 4.9e-24 116.7 528 32.8
Gohir.D09G123700 Gossypium hirsutum HOM05D002430 ORTHO05D001367 1.4e-23 115.2 458 33.4
MSTRG.10839 Avicennia marina HOM05D002430 ORTHO05D001367 3.2e-23 114.0 527 31.1
PSO384G4020 Papaver somniferum HOM05D002430 ORTHO05D001367 4.2e-23 113.6 546 30.4
Lju124A28T35 Lonicera japonica HOM05D002430 ORTHO05D001367 7.1e-23 112.8 527 30.9
Peaxi162Scf00258g00314 Petunia axillaris HOM05D002430 ORTHO05D001367 2.1e-22 111.3 548 32.1
Duzib093G0996 Durio zibethinus HOM05D002430 ORTHO05D001367 7.8e-22 109.4 571 31.7
Thecc.05G170300 Theobroma cacao HOM05D002430 ORTHO05D001367 1.3e-21 108.6 514 32.7
CSS0029138 Camellia sinensis var. sinensis HOM05D002430 ORTHO05D001367 1.7e-21 108.2 432 33.3
Gohir.A09G127600 Gossypium hirsutum HOM05D002430 ORTHO05D001367 1.7e-21 108.2 451 32.4
Potri.009G023100 Populus trichocarpa HOM05D002430 ORTHO05D001367 5.6e-20 103.2 528 29.2
Gorai.006G142300 Gossypium raimondii HOM05D002430 ORTHO05D001367 7.3e-20 102.8 566 31.6
Potri.001G229300 Populus trichocarpa HOM05D002430 ORTHO05D001367 2.1e-19 101.3 507 27.8
COL.COLO4_07451 Corchorus olitorius HOM05D002430 ORTHO05D001367 2.8e-19 100.9 447 32.0
MBI01_g01346_MAGBIO Magnolia biondii HOM05D002430 ORTHO05D001367 6.2e-19 99.8 461 34.5
PSO339G4262 Papaver somniferum HOM05D002430 ORTHO05D001367 8.1e-19 99.4 561 30.7
Migut.K00040 Erythranthe guttata HOM05D002430 ORTHO05D001367 1.8e-18 98.2 579 29.5
TAR369G1008 Trochodendron aralioides HOM05D002430 ORTHO05D001367 6.9e-18 96.3 384 31.0
Sabra09G0014500 Salix brachista HOM05D002430 ORTHO05D001367 3.4e-17 94.0 534 28.5
QL07p023475 Quercus lobata HOM05D002430 ORTHO05D001367 4.5e-17 93.6 457 33.0
PSO339G2748 Papaver somniferum HOM05D002430 ORTHO05D001367 5.8e-17 93.2 410 29.3
Dinv43488 Davidia involucrata HOM05D002430 ORTHO05D001367 7.6e-17 92.8 536 29.5
HPP92_019678 Vanilla planifolia HOM05D002430 ORTHO05D001367 1.9e-15 88.2 466 30.9
Aqoxy5G03994 Aquilegia oxysepala HOM05D002430 ORTHO05D038531 2.4e-15 87.8 244 37.7
AUR62000050 Chenopodium quinoa HOM05D002430 ORTHO05D001367 2.4e-15 87.8 194 34.5
DCAR_029605 Daucus carota HOM05D002430 ORTHO05D001367 2.4e-15 87.8 510 28.6
GSVIVG01001371001 Vitis vinifera HOM05D002430 ORTHO05D001367 2.4e-15 87.8 498 28.1
PGR031G2303 Punica granatum HOM05D002430 ORTHO05D001367 3.2e-15 87.4 453 28.7
Actinidia22027 Actinidia chinensis HOM05D002430 ORTHO05D001367 7.1e-15 86.3 454 29.1
Rhsim01G0132800 Rhododendron simsii HOM05D002430 ORTHO05D001367 7.1e-15 86.3 317 33.1
Actinidia15857 Actinidia chinensis HOM05D002430 ORTHO05D001367 1.2e-14 85.5 202 34.7
Hma1.2p1_0417F.1_g148900 Hydrangea macrophylla HOM05D002430 ORTHO05D001367 1.2e-14 85.5 552 28.4
Cfa010715 Carpinus fangiana HOM05D002430 ORTHO05D001367 2.1e-14 84.7 435 28.5
Thecc.09G219000 Theobroma cacao HOM05D002430 ORTHO05D001367 2.7e-14 84.3 467 31.3
MD12G1059100 Malus domestica HOM05D002430 ORTHO05D001367 7.9e-14 82.8 425 29.6
AT3G57980 Arabidopsis thaliana HOM05D002430 ORTHO05D001367 1.3e-13 82.0 510 27.3
Sabra16G0136800 Salix brachista HOM05D002430 ORTHO05D001367 2.3e-13 81.3 514 26.7
Cc06_g16040 Coffea canephora HOM05D002430 ORTHO05D001367 5.1e-13 80.1 561 26.2
Haze_03264 Corylus avellana HOM05D002430 ORTHO05D001367 5.1e-13 80.1 471 28.9
ECA246G0751 Erigeron canadensis HOM05D002430 ORTHO05D001367 5.1e-13 80.1 540 27.4
Prupe.7G075800 Prunus persica HOM05D002430 ORTHO05D001367 6.7e-13 79.7 495 29.3
Actinidia21575 Actinidia chinensis HOM05D002430 ORTHO05D001367 8.7e-13 79.3 320 31.2
MELO3C023515.2 Cucumis melo HOM05D002430 ORTHO05D001367 8.7e-13 79.3 544 29.2
Ah.06g193300 Amaranthus hybridus HOM05D002430 ORTHO05D001367 1.1e-12 79.0 403 27.3
Ciclev10014485m.g Citrus clementina HOM05D002430 ORTHO05D001367 1.5e-12 78.6 520 27.7
Cpa.g.sc85.76 Carica papaya HOM05D002430 ORTHO05D001367 2.5e-12 77.8 402 28.6
RcHm_v2.0_Chr3g0479881 Rosa chinensis HOM05D002430 ORTHO05D001367 3.3e-12 77.4 388 31.7
Sc09g0000400 Simmondsia chinensis HOM05D002430 ORTHO05D001367 3.3e-12 77.4 239 32.2
AUR62019222 Chenopodium quinoa HOM05D002430 ORTHO05D001367 4.3e-12 77.0 491 26.7
CsaV3_7G031420 Cucumis sativus L. HOM05D002430 ORTHO05D001367 4.3e-12 77.0 594 26.8
MD14G1058900 Malus domestica HOM05D002430 ORTHO05D001367 5.6e-12 76.6 429 32.4
Sed0005924 Sechium edule HOM05D002430 ORTHO05D001367 5.6e-12 76.6 436 29.4
MBI01_g33888_MAGBIO Magnolia biondii HOM05D002430 ORTHO05D001367 1.3e-11 75.5 191 36.6
THA.LOC104811121 Tarenaya hassleriana HOM05D002430 ORTHO05D001367 1.3e-11 75.5 179 35.2
MELO3C014621.2 Cucumis melo HOM05D002430 ORTHO05D001367 1.6e-11 75.1 394 30.2
ECA232G2785 Erigeron canadensis HOM05D002430 ORTHO05D001367 2.8e-11 74.3 548 27.4
FAN16G3290 Fragaria x ananassa HOM05D002430 ORTHO05D001367 2.8e-11 74.3 504 25.6
Manes.10G150800 Manihot esculenta HOM05D002430 ORTHO05D001367 2.8e-11 74.3 525 27.6
unitig_736.g22299 Utricularia gibba HOM05D002430 ORTHO05D001367 3.6e-11 73.9 523 26.6
RcHm_v2.0_Chr5g0080461 Rosa chinensis HOM05D002430 ORTHO05D001367 8.1e-11 72.8 409 28.6
Rhsim05G0150900 Rhododendron simsii HOM05D002430 ORTHO05D001367 1.4e-10 72.0 383 28.5
vmacro21159 Vaccinium macrocarpon HOM05D002430 ORTHO05D001367 1.4e-10 72.0 514 27.0
CARHR168290 Cardamine hirsuta HOM05D002430 ORTHO05D001367 1.8e-10 71.6 523 27.0
CiPaw.13G169400 Carya illinoinensis HOM05D002430 ORTHO05D001367 2.4e-10 71.2 373 29.5
ClCG02G023470 Citrullus lanatus HOM05D002430 ORTHO05D001367 2.4e-10 71.2 475 26.5
Lsat_1_v5_gn_5_162941 Lactuca sativa HOM05D002430 ORTHO05D001367 2.4e-10 71.2 256 29.7
QL04p000087 Quercus lobata HOM05D002430 ORTHO05D001367 2.4e-10 71.2 552 26.4
HPP92_018954 Vanilla planifolia HOM05D002430 ORTHO05D001367 5.3e-10 70.1 453 28.9
Potri.003G212500 Populus trichocarpa HOM05D002430 ORTHO05D001367 6.9e-10 69.7 298 29.5
FvH4_6g22470 Fragaria vesca HOM05D002430 ORTHO05D001367 1.2e-09 68.9 438 30.8
Potri.T042048 Populus trichocarpa HOM05D002430 ORTHO05D001367 1.2e-09 68.9 298 30.2
TWI34G0366 Tripterygium wilfordii HOM05D002430 ORTHO05D001367 1.2e-09 68.9 259 30.5
Manes.06G169700 Manihot esculenta HOM05D002430 ORTHO05D001367 1.5e-09 68.6 446 27.6
Dinv08062 Davidia involucrata HOM05D002430 ORTHO05D001367 2.0e-09 68.2 208 34.6
THA.LOC104827578 Tarenaya hassleriana HOM05D002430 ORTHO05D001367 2.0e-09 68.2 297 28.3
Atru.chr11.2693 Acer truncatum HOM05D002430 ORTHO05D001367 2.6e-09 67.8 246 31.3
QL04p003134 Quercus lobata HOM05D002430 ORTHO05D001367 2.6e-09 67.8 552 26.1
Carub.0005s2482 Capsella rubella HOM05D002430 ORTHO05D001367 3.4e-09 67.4 529 25.9
Sopen01g033520 Solanum pennellii HOM05D002430 ORTHO05D001367 3.4e-09 67.4 286 28.3
Gohir.D06G112100 Gossypium hirsutum HOM05D002430 ORTHO05D001367 5.8e-09 66.6 342 28.7
Sed0006481 Sechium edule HOM05D002430 ORTHO05D001367 5.8e-09 66.6 581 27.5
ClCG09G003810 Citrullus lanatus HOM05D002430 ORTHO05D001367 7.6e-09 66.2 581 27.7
Prupe.2G004300 Prunus persica HOM05D002430 ORTHO05D001367 7.6e-09 66.2 192 32.8
Atru.chr3.2428 Acer truncatum HOM05D002430 ORTHO05D001367 9.9e-09 65.9 400 25.8
CARHR139590 Cardamine hirsuta HOM05D002430 ORTHO05D001367 9.9e-09 65.9 504 24.4
FAN02G1644 Fragaria x ananassa HOM05D002430 ORTHO05D001367 1.3e-08 65.5 462 30.1
VMungo1080G1061 Vigna mungo HOM05D002430 ORTHO05D001367 1.3e-08 65.5 558 26.9
FAN21G2033 Fragaria x ananassa HOM05D002430 ORTHO05D001367 1.7e-08 65.1 512 25.4
CiPaw.13G001000 Carya illinoinensis HOM05D002430 ORTHO05D001367 2.2e-08 64.7 536 26.7
SalBow1G3943 Salvia bowleyana HOM05D002430 ORTHO05D001367 2.2e-08 64.7 202 32.2
Sp5g04740 Schrenkiella parvula HOM05D002430 ORTHO05D001367 2.2e-08 64.7 274 27.0
THA.LOC104802495 Tarenaya hassleriana HOM05D002430 ORTHO05D001367 2.2e-08 64.7 526 26.8
Actinidia16286 Actinidia chinensis HOM05D002430 ORTHO05D001367 2.9e-08 64.3 73 43.8
Actinidia21577 Actinidia chinensis HOM05D002430 ORTHO05D001367 3.8e-08 63.9 99 39.4
AT2G44430 Arabidopsis thaliana HOM05D002430 ORTHO05D001367 4.9e-08 63.5 349 26.9
CANSAT54G2004 Cannabis sativa HOM05D002430 ORTHO05D001367 4.9e-08 63.5 237 30.4
Duzib170G0686 Durio zibethinus HOM05D002430 ORTHO05D001367 6.4e-08 63.2 409 27.9
FAN14G5503 Fragaria x ananassa HOM05D002430 ORTHO05D001367 8.4e-08 62.8 284 29.9
Nitab4.5_0003792g0010 Nicotiana tabacum HOM05D002430 ORTHO05D001367 8.4e-08 62.8 353 27.2
Hund07555 Selenicereus undatus HOM05D002430 ORTHO05D001367 8.4e-08 62.8 263 27.8
FAN05G3754 Fragaria x ananassa HOM05D002430 ORTHO05D001367 1.4e-07 62.0 456 30.3
FAN05G4183 Fragaria x ananassa HOM05D002430 ORTHO05D001367 1.4e-07 62.0 456 30.3
MD11G1017600 Malus domestica HOM05D002430 ORTHO05D001367 1.4e-07 62.0 278 25.9
SGA_v2.0_scaffold274G46476 Striga asiatica HOM05D002430 ORTHO05D001367 1.4e-07 62.0 515 26.8
SGA_v2.0_scaffold94G28424 Striga asiatica HOM05D002430 ORTHO05D001367 1.4e-07 62.0 526 27.9
BcaNung05750 Brassica carinata HOM05D002430 ORTHO05D001367 1.9e-07 61.6 202 31.2
C08p33550 Brassica napus HOM05D002430 ORTHO05D001367 1.9e-07 61.6 202 31.2
BraA04t18659Z Brassica rapa HOM05D002430 ORTHO05D001367 1.9e-07 61.6 479 25.5
AUR62024311 Chenopodium quinoa HOM05D002430 ORTHO05D001367 1.9e-07 61.6 213 28.6
BcaC07g40172 Brassica carinata HOM05D002430 ORTHO05D001367 2.4e-07 61.2 245 27.8
FAN09G0956 Fragaria x ananassa HOM05D002430 ORTHO05D001367 2.4e-07 61.2 409 29.3
FAN11G0220 Fragaria x ananassa HOM05D002430 ORTHO05D001367 2.4e-07 61.2 518 27.0
A09p50800 Brassica napus HOM05D002430 ORTHO05D001367 3.2e-07 60.8 303 26.7
CARHR137220 Cardamine hirsuta HOM05D002430 ORTHO05D001367 3.2e-07 60.8 268 29.5
QL01p009136 Quercus lobata HOM05D002430 ORTHO05D001367 3.2e-07 60.8 542 27.9
Lalb_Chr25g0283511 Lupinus albus HOM05D002430 ORTHO05D001367 4.2e-07 60.5 519 25.8
AL5G39630 Arabidopsis lyrata HOM05D002430 ORTHO05D001367 5.5e-07 60.1 535 26.0
A04p32020 Brassica napus HOM05D002430 ORTHO05D001367 5.5e-07 60.1 283 28.6
CAN.G261.18 Capsicum annuum HOM05D002430 ORTHO05D001367 5.5e-07 60.1 430 28.8
Haze_23026 Corylus avellana HOM05D002430 ORTHO05D001367 5.5e-07 60.1 402 26.9
BcaC07g40168 Brassica carinata HOM05D002430 ORTHO05D001367 9.3e-07 59.3 288 29.9
PGSC0003DMG400006314 Solanum tuberosum HOM05D002430 ORTHO05D001367 9.3e-07 59.3 351 26.5
CANSAT54G1317 Cannabis sativa HOM05D002430 ORTHO05D001367 1.6e-06 58.5 245 29.8
Thhalv10001779m.g Eutrema salsugineum HOM05D002430 ORTHO05D001367 1.6e-06 58.5 328 25.9
Solyc01g073950.4 Solanum lycopersicum HOM05D002430 ORTHO05D001367 1.6e-06 58.5 348 26.4
DCAR_017013 Daucus carota HOM05D002430 ORTHO05D001367 2.1e-06 58.2 470 25.7
Psat0s813g0040 Pisum sativum HOM05D002430 ORTHO05D001367 2.1e-06 58.2 511 26.0
Potri.001G013600 Populus trichocarpa HOM05D002430 ORTHO05D001367 2.1e-06 58.2 294 27.6
Rhsim13G0226400 Rhododendron simsii HOM05D002430 ORTHO05D001367 2.1e-06 58.2 57 45.6
TWI53G1068 Tripterygium wilfordii HOM05D002430 ORTHO05D001367 2.1e-06 58.2 520 27.7
BraA09t40527Z Brassica rapa HOM05D002430 ORTHO05D001367 2.7e-06 57.8 305 26.6
AT2G42150 Arabidopsis thaliana HOM05D002430 ORTHO05D001367 3.5e-06 57.4 283 29.7
Gohir.A06G117800 Gossypium hirsutum HOM05D002430 ORTHO05D001367 3.5e-06 57.4 447 27.1
Nitab4.5_0000892g0110 Nicotiana tabacum HOM05D002430 ORTHO05D001367 3.5e-06 57.4 515 28.0
TAR369G1019 Trochodendron aralioides HOM05D002430 ORTHO05D038531 3.5e-06 57.4 113 40.7
MD03G1017000 Malus domestica HOM05D002430 ORTHO05D001367 4.6e-06 57.0 345 25.2
BolC8t50950H Brassica oleracea HOM05D002430 ORTHO05D001367 6.0e-06 56.6 204 30.9
Sabra03G0155500 Salix brachista HOM05D002430 ORTHO05D001367 6.0e-06 56.6 404 27.5
Sabra03G0158700 Salix brachista HOM05D002430 ORTHO05D001367 6.0e-06 56.6 404 27.5
FvH4_3g44130 Fragaria vesca HOM05D002430 ORTHO05D001367 7.9e-06 56.2 517 26.1


User provided reference genes

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