Gene: AT3G57980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G57980
  • Transcript Identifier AT3G57980.1
  • Gene Type Coding gene
  • Location Chr3 : 21466919-21469202 : negative

Gene Family Information

  • ID HOM05D002430
  • #Genes/#Species 279/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G57980.1
  • uniprot F4J4L9

Descriptions

  • Description DNA-binding bromodomain-containing protein
  • Computational description DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G42150.1); Has 5050 Blast hits to 3932 proteins in 403 species: Archae - 12; Bacteria - 304; Metazoa - 2409; Fungi - 569; Plants - 345; Viruses - 12; Other Eukaryotes - 1399 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
IPR001487 Bromodomain
IPR001005 SANT/Myb domain
IPR036427 Bromodomain-like superfamily
Mapman id Description
35.1 not assigned.annotated