Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 4.2e-163 578.2 337 100.0
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 1.1e-131 473.8 302 90.4
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.2e-70 269.6 336 53.6
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 7.9e-69 265.0 345 53.0
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.3e-67 259.6 332 52.1
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 6.2e-66 255.4 338 51.5
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.1e-65 254.6 344 53.5
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.1e-65 254.6 338 50.9
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 9.3e-62 241.5 323 57.3
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 6.7e-60 235.3 331 50.8
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 1.6e-58 230.7 174 69.5
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 2.8e-58 229.9 344 50.9
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 4.8e-58 229.2 178 68.5
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 1.1e-57 228.0 168 73.2
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 1.8e-57 227.3 168 73.2
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 3.1e-57 226.5 339 46.9
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 5.3e-57 225.7 180 67.2
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 9.0e-57 224.9 177 67.2
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 9.0e-57 224.9 301 51.5
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 9.0e-57 224.9 170 73.5
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 1.2e-56 224.6 365 47.7
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.5e-56 224.2 168 71.4
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 2.0e-56 223.8 176 68.2
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 2.6e-56 223.4 168 72.6
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 3.4e-56 223.0 348 48.0
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 3.4e-56 223.0 176 68.2
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.7e-55 220.7 328 54.6
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 1.7e-55 220.7 169 69.8
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 3.8e-55 219.5 168 70.2
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 3.8e-55 219.5 328 54.3
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 6.5e-55 218.8 311 50.5
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 6.5e-55 218.8 345 51.3
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 1.4e-54 217.6 172 69.2
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 1.4e-54 217.6 172 69.2
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 1.4e-54 217.6 174 69.0
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 1.4e-54 217.6 168 69.6
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 1.4e-54 217.6 158 75.3
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 5.5e-54 215.7 165 69.1
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 5.5e-54 215.7 165 69.1
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 5.5e-54 215.7 168 69.0
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 9.3e-54 214.9 167 70.1
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 1.2e-53 214.5 168 70.8
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 1.6e-53 214.2 157 73.2
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 3.5e-53 213.0 168 69.0
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 4.6e-53 212.6 167 66.5
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 6.0e-53 212.2 168 73.2
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 6.0e-53 212.2 174 68.4
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 7.9e-53 211.8 325 50.8
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 1.3e-52 211.1 165 67.9
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 1.8e-52 210.7 165 67.3
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 1.8e-52 210.7 165 67.3
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 1.8e-52 210.7 168 72.0
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 3.0e-52 209.9 169 66.9
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 3.9e-52 209.5 164 70.1
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 5.1e-52 209.1 167 66.5
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 6.7e-52 208.8 165 66.7
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 8.7e-52 208.4 168 70.8
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 8.7e-52 208.4 168 70.8
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.1e-51 208.0 167 65.9
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.1e-51 208.0 167 65.9
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.1e-51 208.0 167 65.9
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.5e-51 207.6 162 68.5
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.3e-51 206.1 168 66.1
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 5.7e-51 205.7 164 69.5
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 9.6e-51 204.9 165 66.1
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 9.6e-51 204.9 168 66.1
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 1.3e-50 204.5 168 69.6
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 1.6e-50 204.1 174 63.8
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 1.6e-50 204.1 157 70.1
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 2.8e-50 203.4 168 67.9
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 6.3e-50 202.2 158 66.5
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 8.2e-50 201.8 166 68.7
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 3.1e-49 199.9 167 66.5
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 3.1e-49 199.9 169 65.7
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 3.1e-49 199.9 325 45.5
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 4.1e-49 199.5 205 56.6
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 5.3e-49 199.1 179 63.7
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 1.2e-48 198.0 157 72.6
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.2e-48 198.0 329 47.4
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.6e-48 196.8 168 67.3
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 2.6e-48 196.8 169 66.3
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 4.5e-48 196.1 157 72.0
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 7.6e-48 195.3 157 66.9
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 7.6e-48 195.3 157 66.9
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.0e-47 194.9 157 70.1
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 2.2e-47 193.7 157 66.2
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 2.2e-47 193.7 327 43.1
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 2.9e-47 193.4 163 68.1
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 6.5e-47 192.2 165 64.2
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 1.1e-46 191.4 157 69.4
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 3.2e-46 189.9 213 53.1
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 1.2e-45 188.0 362 43.4
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 4.6e-45 186.0 162 63.6
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 3.3e-43 179.9 171 59.1
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 1.8e-41 174.1 164 61.6
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 3.1e-41 173.3 133 69.2
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.0e-39 168.3 135 70.4
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 3.8e-39 166.4 124 66.1
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.6e-37 161.0 278 48.2
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 2.7e-37 160.2 127 70.9
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 3.0e-36 156.8 134 67.2
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 3.0e-36 156.8 134 67.2
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 5.1e-36 156.0 124 66.9
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 2.5e-35 153.7 120 70.8
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 2.2e-34 150.6 128 64.8
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 3.2e-30 136.7 104 67.3
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 2.7e-29 133.7 172 44.8
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 6.1e-29 132.5 118 63.6
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 2.2e-26 124.0 92 71.7
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 1.4e-25 121.3 161 44.1
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 3.6e-21 106.7 182 42.3
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 1.3e-18 98.2 70 71.4
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 3.1e-17 93.6 115 50.4
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 1.0e-15 88.6 64 73.4
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 1.0e-12 78.6 73 58.9
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 3.7e-10 70.1 107 43.9
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.1e-09 68.6 40 82.5
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 4.1e-09 66.6 61 57.4
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 4.1e-09 66.6 39 82.1
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 9.1e-09 65.5 54 63.0
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 3.2e-06 57.0 215 30.2


User provided reference genes

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