Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 4.8e-268 927.2 441 100.0
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 3.0e-225 785.0 438 83.1
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 9.0e-198 693.7 432 73.4
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 1.5e-192 676.4 431 71.9
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 2.8e-191 672.2 435 71.0
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 4.8e-191 671.4 435 70.1
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 1.2e-189 666.8 433 70.2
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 3.4e-189 665.2 435 68.7
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 3.4e-189 665.2 438 70.3
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 3.4e-189 665.2 438 69.9
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 7.6e-189 664.1 432 71.5
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 9.9e-189 663.7 432 69.9
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 1.3e-188 663.3 436 70.2
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 1.3e-188 663.3 438 70.1
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 2.9e-188 662.1 432 70.1
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 4.9e-188 661.4 430 70.2
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 8.4e-188 660.6 439 70.4
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 8.4e-188 660.6 442 70.1
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 3.2e-187 658.7 432 70.1
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 7.1e-187 657.5 433 70.0
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 9.3e-187 657.1 436 69.5
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 1.2e-186 656.8 433 70.2
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 1.6e-186 656.4 432 70.1
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 2.1e-186 656.0 431 70.1
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 2.1e-186 656.0 438 69.4
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 6.0e-186 654.4 432 69.4
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 7.9e-186 654.1 431 69.6
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 3.9e-185 651.7 435 68.3
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 3.9e-185 651.7 434 68.7
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 3.3e-184 648.7 436 68.3
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 3.3e-184 648.7 432 69.0
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 3.3e-184 648.7 432 67.6
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 1.6e-183 646.4 436 69.3
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 4.8e-183 644.8 436 67.2
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 8.1e-183 644.0 432 67.1
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 1.4e-182 643.3 419 70.4
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 1.4e-182 643.3 422 71.3
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 3.1e-182 642.1 436 67.0
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 5.3e-182 641.3 422 70.9
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 1.2e-181 640.2 432 66.7
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 2.0e-181 639.4 433 69.5
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 2.6e-181 639.0 431 66.8
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 2.6e-181 639.0 433 67.2
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 3.4e-181 638.6 428 68.7
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 7.6e-181 637.5 429 69.2
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 7.6e-181 637.5 429 69.2
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 2.9e-180 635.6 432 66.4
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 3.8e-180 635.2 433 67.0
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 4.9e-180 634.8 431 68.4
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 1.4e-179 633.3 433 67.9
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 3.2e-179 632.1 440 66.8
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 3.2e-179 632.1 431 68.2
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 7.1e-179 630.9 437 66.1
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 1.6e-178 629.8 430 67.9
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 2.7e-178 629.0 432 67.4
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 4.6e-178 628.2 431 67.7
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 2.3e-177 625.9 430 67.9
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 3.0e-177 625.5 434 67.3
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 8.7e-177 624.0 432 65.3
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 1.9e-176 622.9 430 67.9
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 4.3e-176 621.7 432 67.4
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 7.4e-176 620.9 430 67.7
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 7.4e-176 620.9 435 65.3
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.6e-175 619.8 430 67.7
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 2.8e-175 619.0 434 65.2
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 1.8e-174 616.3 430 66.7
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 2.4e-174 615.9 435 64.4
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 9.0e-174 614.0 438 65.3
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 1.2e-173 613.6 422 66.1
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 1.5e-173 613.2 431 65.4
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 7.6e-173 610.9 439 64.0
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 6.5e-172 607.8 432 64.1
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 2.7e-170 602.4 440 65.0
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 3.5e-170 602.1 433 64.0
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 7.9e-170 600.9 433 63.7
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.0e-169 600.5 434 66.1
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 1.3e-169 600.1 432 63.9
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 3.9e-169 598.6 432 63.2
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 5.1e-169 598.2 433 63.0
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 6.7e-169 597.8 434 63.8
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 1.1e-168 597.0 419 66.8
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 1.5e-168 596.7 409 67.2
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 7.4e-168 594.3 433 64.0
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 2.8e-167 592.4 410 65.6
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 2.8e-167 592.4 439 64.9
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.8e-166 589.7 439 65.1
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 1.5e-165 586.6 401 67.3
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 1.7e-164 583.2 432 63.0
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 5.0e-164 581.6 395 69.6
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.1e-163 580.5 439 63.3
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.1e-163 580.5 439 64.5
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 1.4e-163 580.1 437 64.5
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 4.2e-163 578.6 419 64.7
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 1.8e-153 546.6 346 72.3
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 5.5e-147 525.0 355 66.2
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 1.1e-144 517.3 438 55.5
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 2.7e-138 496.1 423 55.3
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 2.7e-138 496.1 433 54.0
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 8.6e-124 448.0 433 51.7
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 1.6e-122 443.7 480 46.2
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 3.6e-122 442.6 420 51.7
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 1.5e-115 420.6 319 60.5
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 2.4e-102 376.7 387 50.6
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 7.3e-99 365.2 452 42.5
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 1.3e-95 354.4 265 61.5
Eucgr.L02754 Eucalyptus grandis HOM05D006367 ORTHO05D007942 2.1e-93 347.1 223 70.9
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 4.7e-90 335.9 422 42.2
PGSC0003DMG400031203 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.4e-88 329.3 199 72.4
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 3.5e-85 319.7 428 40.0
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 9.9e-80 301.6 328 45.7
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 2.4e-78 297.0 235 59.1
Glyma.08G142950 Glycine max HOM05D006367 ORTHO05D007942 1.3e-74 284.6 183 68.9
Aqoxy4G01385 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.2e-64 251.5 151 74.8
Aqoxy4G01201 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 2.2e-63 247.3 151 73.5
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 6.7e-60 235.7 180 62.2
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 7.9e-53 212.2 189 54.0
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 8.2e-50 202.2 192 51.0
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.7e-37 160.6 418 28.5
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 2.2e-23 114.4 90 56.7
Haze_08452 Corylus avellana HOM05D014029 ORTHO05D044818 3.1e-17 94.0 69 62.3
CARHR293120 Cardamine hirsuta HOM05D006367 ORTHO05D007942 5.5e-14 83.2 87 52.9
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 4.7e-13 80.1 296 23.3
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 4.7e-13 80.1 296 23.3
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 6.1e-13 79.7 295 23.7
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 8.0e-13 79.3 295 23.7
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 8.0e-13 79.3 296 23.0
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 8.0e-13 79.3 340 23.5
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 1.0e-12 79.0 295 24.1
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 1.0e-12 79.0 340 23.5
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 1.4e-12 78.6 296 22.6
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.8e-12 78.2 296 22.6
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 3.0e-12 77.4 292 23.6
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 4.0e-12 77.0 300 24.0
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 4.0e-12 77.0 291 23.0
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 5.2e-12 76.6 295 24.1
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 6.8e-12 76.3 286 23.1
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 8.8e-12 75.9 293 22.9
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 8.8e-12 75.9 295 23.1
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 1.2e-11 75.5 293 23.2
Hma1.2p1_0696F.1_g204670 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 1.5e-11 75.1 49 65.3
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 1.5e-11 75.1 295 23.7
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 2.0e-11 74.7 272 22.8
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 2.0e-11 74.7 340 22.6
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 2.6e-11 74.3 300 24.0
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 2.6e-11 74.3 300 24.7
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 2.6e-11 74.3 298 23.2
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 3.4e-11 73.9 293 22.5
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 4.4e-11 73.6 270 23.0
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 5.7e-11 73.2 295 23.4
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 1.3e-10 72.0 291 23.4
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 2.2e-10 71.2 272 22.1
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 3.7e-10 70.5 291 22.7
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 1.1e-09 68.9 134 24.6
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 1.4e-09 68.6 293 21.8
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 4.1e-09 67.0 181 24.3
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 4.1e-09 67.0 181 24.3
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 5.4e-09 66.6 151 25.2
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 7.0e-09 66.2 178 23.0
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 9.2e-09 65.9 138 26.1
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 1.6e-08 65.1 270 20.7
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 2.0e-08 64.7 136 24.3
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 3.5e-08 63.9 136 25.0
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 4.5e-08 63.5 128 27.3
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 4.5e-08 63.5 134 22.4
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 4.5e-08 63.5 134 22.4
Haze_24492 Corylus avellana HOM05D001078 ORTHO05D000927 8.6e-07 59.3 50 60.0


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