Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.2e-101 373.2 193 100.0
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 7.1e-91 337.4 193 90.7
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 5.3e-62 241.5 196 67.3
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 1.6e-58 229.9 185 66.5
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.4e-57 226.9 194 62.9
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 9.7e-56 220.7 200 61.0
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 2.2e-55 219.5 196 60.7
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 8.2e-55 217.6 188 59.6
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 8.2e-55 217.6 188 59.6
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.1e-54 217.2 194 60.3
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 1.7e-52 209.9 197 59.9
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 2.2e-52 209.5 194 60.3
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.9e-52 209.1 194 60.3
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 5.0e-52 208.4 194 60.3
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 6.5e-52 208.0 194 58.2
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 6.5e-52 208.0 198 59.6
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 8.5e-52 207.6 196 59.2
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 8.5e-52 207.6 194 60.3
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 1.1e-51 207.2 200 59.5
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.1e-51 207.2 192 59.9
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.5e-51 206.8 194 57.7
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.9e-51 206.5 197 60.4
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 3.2e-51 205.7 195 61.5
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 4.2e-51 205.3 189 60.3
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 7.2e-51 204.5 194 58.2
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 7.2e-51 204.5 194 58.2
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 9.4e-51 204.1 187 58.8
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 9.4e-51 204.1 194 57.2
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 9.4e-51 204.1 198 60.1
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 2.1e-50 203.0 197 58.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.1e-50 203.0 196 57.7
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 3.6e-50 202.2 193 59.6
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.7e-50 201.8 195 59.0
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 8.0e-50 201.1 196 57.7
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 8.0e-50 201.1 187 58.3
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.4e-49 200.3 187 57.8
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.4e-49 200.3 191 58.6
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.8e-49 199.9 195 59.5
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 2.3e-49 199.5 196 56.6
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 3.0e-49 199.1 192 59.4
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 5.2e-49 198.4 196 56.6
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 5.2e-49 198.4 192 58.9
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 6.8e-49 198.0 194 56.2
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.5e-48 196.8 193 54.9
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.0e-48 196.4 196 57.1
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 3.4e-48 195.7 195 57.9
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 5.7e-48 194.9 192 57.8
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.7e-48 194.9 194 53.6
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 7.5e-48 194.5 194 58.2
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 2.2e-47 193.0 193 56.0
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 2.8e-47 192.6 193 58.5
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 4.8e-47 191.8 197 56.9
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.8e-46 189.9 193 54.9
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.8e-46 189.9 195 53.3
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 5.3e-46 188.3 194 55.2
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 9.1e-46 187.6 193 54.4
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 1.2e-45 187.2 192 52.1
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 1.2e-45 187.2 192 52.1
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 4.5e-45 185.3 196 53.1
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 4.5e-45 185.3 194 53.1
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 7.7e-45 184.5 194 52.6
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 7.7e-45 184.5 196 55.6
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.7e-44 183.3 185 51.4
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.7e-44 183.3 191 55.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.2e-44 183.0 186 52.2
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 3.8e-44 182.2 199 52.8
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 8.5e-44 181.0 188 55.3
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 8.5e-44 181.0 196 52.6
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 8.5e-44 181.0 194 54.1
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.5e-43 179.5 244 45.1
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 3.2e-43 179.1 193 53.4
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 4.2e-43 178.7 186 55.9
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 5.5e-43 178.3 203 52.7
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 5.5e-43 178.3 194 51.5
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 9.4e-43 177.6 194 55.2
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.6e-42 176.8 190 54.7
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 2.7e-42 176.0 187 52.4
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 6.1e-42 174.9 194 51.0
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 6.1e-42 174.9 178 54.5
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 6.1e-42 174.9 194 54.6
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 8.0e-42 174.5 181 55.2
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.3e-41 172.9 184 52.7
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 2.3e-41 172.9 194 50.0
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 3.0e-41 172.6 190 53.7
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 4.0e-41 172.2 193 51.8
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 6.8e-41 171.4 193 50.8
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 8.8e-41 171.0 217 48.4
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 2.0e-40 169.9 194 48.5
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 7.5e-40 167.9 192 52.6
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 9.8e-40 167.5 186 52.7
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 2.2e-39 166.4 188 49.5
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 3.7e-39 165.6 203 47.8
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 8.3e-39 164.5 191 49.2
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.1e-38 164.1 194 51.0
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 4.1e-38 162.2 197 50.8
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 9.1e-38 161.0 172 50.0
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 5.9e-37 158.3 183 54.1
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 7.7e-37 157.9 197 50.3
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 5.0e-36 155.2 197 47.7
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 6.6e-36 154.8 192 48.4
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.5e-35 153.7 207 44.4
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.2e-34 150.6 190 47.9
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.6e-34 150.2 192 45.3
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 4.7e-34 148.7 192 44.3
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 4.7e-34 148.7 192 44.3
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 8.9e-33 144.4 192 43.2
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 8.9e-33 144.4 150 54.7
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.5e-32 143.7 194 45.4
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 2.0e-32 143.3 204 42.2
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 4.4e-32 142.1 148 52.7
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 7.5e-32 141.4 220 42.7
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 2.2e-31 139.8 205 43.9
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.2e-29 134.0 188 43.6
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.3e-28 130.6 147 50.3
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.9e-28 129.4 121 61.2
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 5.0e-28 128.6 169 42.6
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 2.8e-26 122.9 83 75.9
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 4.7e-26 122.1 146 50.0
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 5.2e-25 118.6 83 71.1
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 8.9e-25 117.9 80 76.2
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.2e-24 117.5 83 69.9
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 3.7e-23 112.5 91 61.5
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.9e-22 110.2 141 44.7
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 3.5e-21 105.9 152 46.1
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 7.3e-19 98.2 151 42.4
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 1.2e-18 97.4 162 40.1
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 2.1e-18 96.7 73 63.0
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.4e-17 94.0 59 79.7
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 4.0e-17 92.4 77 62.3
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.8e-16 88.6 109 53.2
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 6.4e-15 85.1 114 47.4
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.4e-14 83.2 99 47.5
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 3.2e-14 82.8 74 54.1
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 6.0e-13 78.6 83 50.6
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 3.9e-12 75.9 88 46.6
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 2.5e-11 73.2 180 29.4
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 7.3e-11 71.6 64 59.4
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 4.7e-10 68.9 134 38.1
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 6.4e-07 58.5 76 48.7
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 8.4e-07 58.2 66 45.5


User provided reference genes

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