Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1877 Ceratophyllum demersum HOM05D001598 ORTHO05D002757 1.3e-108 396.4 197 100.0
CDE06G1865 Ceratophyllum demersum HOM05D001598 ORTHO05D002757 1.6e-85 319.7 165 96.4
Gohir.D03G140900 Gossypium hirsutum HOM05D001598 ORTHO05D002757 1.5e-40 170.2 180 52.2
TAR629G0383 Trochodendron aralioides HOM05D001598 ORTHO05D002757 2.6e-40 169.5 176 55.7
TAR629G1744 Trochodendron aralioides HOM05D001598 ORTHO05D002757 2.6e-40 169.5 176 55.7
Duzib251G0726 Durio zibethinus HOM05D001598 ORTHO05D002757 3.4e-40 169.1 175 53.1
Gorai.003G147700 Gossypium raimondii HOM05D001598 ORTHO05D002757 7.6e-40 167.9 180 51.7
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 2.2e-39 166.4 170 53.5
Gohir.A03G104500 Gossypium hirsutum HOM05D001598 ORTHO05D002757 2.2e-39 166.4 180 51.1
Gohir.D11G326400 Gossypium hirsutum HOM05D001598 ORTHO05D002757 2.2e-39 166.4 182 50.5
DCAR_021706 Daucus carota HOM05D001598 ORTHO05D002757 2.9e-39 166.0 180 52.2
Gohir.D02G129600 Gossypium hirsutum HOM05D001598 ORTHO05D002757 2.9e-39 166.0 180 51.1
Gorai.005G145600 Gossypium raimondii HOM05D001598 ORTHO05D002757 3.8e-39 165.6 180 51.1
Gohir.D03G140800 Gossypium hirsutum HOM05D001598 ORTHO05D002757 5.0e-39 165.2 180 51.1
Aqoxy3G00689 Aquilegia oxysepala HOM05D001598 ORTHO05D002757 8.4e-39 164.5 193 48.7
Gohir.D02G129700 Gossypium hirsutum HOM05D001598 ORTHO05D002757 2.5e-38 162.9 180 50.6
MBI05_g28392_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D002757 3.2e-38 162.5 172 54.7
Thecc.02G349900 Theobroma cacao HOM05D001598 ORTHO05D002757 5.5e-38 161.8 163 52.8
Nn4g23114 Nelumbo nucifera HOM05D001598 ORTHO05D002757 7.1e-38 161.4 179 52.0
vmacro01241 Vaccinium macrocarpon HOM05D001645 ORTHO05D002757 7.1e-38 161.4 179 52.0
vmacro01243 Vaccinium macrocarpon HOM05D001645 ORTHO05D002757 7.1e-38 161.4 179 52.0
Lj8A728T10 Lonicera japonica HOM05D001598 ORTHO05D002757 9.3e-38 161.0 179 52.0
Haze_12029 Corylus avellana HOM05D001598 ORTHO05D002757 1.2e-37 160.6 182 49.5
CsaV3_1G041940 Cucumis sativus L. HOM05D001598 ORTHO05D002757 2.1e-37 159.8 188 49.5
Sabra15G0003000 Salix brachista HOM05D001598 ORTHO05D002757 2.1e-37 159.8 174 53.4
Nitab4.5_0003566g0010 Nicotiana tabacum HOM05D001598 ORTHO05D002757 2.7e-37 159.5 167 51.5
COL.COLO4_22982 Corchorus olitorius HOM05D001598 ORTHO05D010176 3.5e-37 159.1 178 49.4
ATR0564G259 Amborella trichopoda HOM05D001598 ORTHO05D002757 6.1e-37 158.3 166 53.6
Nitab4.5_0000141g0270 Nicotiana tabacum HOM05D001598 ORTHO05D002757 6.1e-37 158.3 167 50.3
Potri.015G004400 Populus trichocarpa HOM05D001598 ORTHO05D002757 6.1e-37 158.3 174 52.9
Atru.chr11.1822 Acer truncatum HOM05D001598 ORTHO05D002757 7.9e-37 157.9 169 51.5
MELO3C015610.2 Cucumis melo HOM05D001598 ORTHO05D002757 7.9e-37 157.9 184 47.8
ClCG03G014280 Citrullus lanatus HOM05D001598 ORTHO05D002757 1.3e-36 157.1 191 47.6
CSS0022192 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D002757 6.7e-36 154.8 180 50.0
HPP92_016856 Vanilla planifolia HOM05D001598 ORTHO05D002757 6.7e-36 154.8 170 50.0
SalBow2G2991 Salvia bowleyana HOM05D001598 ORTHO05D002757 8.7e-36 154.5 162 56.2
CAN.G38.31 Capsicum annuum HOM05D001598 ORTHO05D002757 1.1e-35 154.1 166 51.8
Lalb_Chr10g0098161 Lupinus albus HOM05D001598 ORTHO05D002757 1.1e-35 154.1 162 53.7
Prupe.3G107100 Prunus persica HOM05D001598 ORTHO05D002757 1.1e-35 154.1 159 53.5
Carub.0005s0177 Capsella rubella HOM05D001598 ORTHO05D002757 1.5e-35 153.7 149 54.4
Ciclev10032165m.g Citrus clementina HOM05D001598 ORTHO05D002757 1.5e-35 153.7 178 50.6
Lj2g0010789 Lotus japonicus HOM05D001598 ORTHO05D002757 1.9e-35 153.3 149 54.4
Sed0011075 Sechium edule HOM05D001598 ORTHO05D002757 1.9e-35 153.3 169 49.1
SalBow2G3361 Salvia bowleyana HOM05D001598 ORTHO05D002757 2.5e-35 152.9 162 55.6
MD13G1073900 Malus domestica HOM05D001598 ORTHO05D002757 3.3e-35 152.5 173 50.9
Manes.06G018600 Manihot esculenta HOM05D001598 ORTHO05D002757 3.3e-35 152.5 169 51.5
Prupe.1G272100 Prunus persica HOM05D001598 ORTHO05D002757 3.3e-35 152.5 166 52.4
Medtr5g039440 Medicago truncatula HOM05D001598 ORTHO05D002757 4.3e-35 152.1 144 56.2
QL03p064604 Quercus lobata HOM05D001598 ORTHO05D002757 4.3e-35 152.1 136 58.8
Cc11_g13210 Coffea canephora HOM05D001598 ORTHO05D002757 7.4e-35 151.4 176 48.9
HanXRQChr12g0371061 Helianthus annuus HOM05D001598 ORTHO05D002757 7.4e-35 151.4 154 51.9
Glyma.01G045300 Glycine max HOM05D001598 ORTHO05D002757 9.7e-35 151.0 146 54.8
ECA234G4840 Erigeron canadensis HOM05D001598 ORTHO05D002757 1.3e-34 150.6 157 52.9
AL5G12440 Arabidopsis lyrata HOM05D001598 ORTHO05D002757 1.6e-34 150.2 157 54.1
TWI18G0113 Tripterygium wilfordii HOM05D001598 ORTHO05D002757 2.2e-34 149.8 173 49.7
TPR.G37035 Trifolium pratense HOM05D001598 ORTHO05D002757 3.7e-34 149.1 152 53.9
arahy.Tifrunner.gnm1.ann1.5WK4WG Arachis hypogaea HOM05D001598 ORTHO05D002757 6.3e-34 148.3 172 47.7
arahy.Tifrunner.gnm1.ann1.Z4M8GV Arachis hypogaea HOM05D001598 ORTHO05D002757 6.3e-34 148.3 172 47.7
EL10Ac6g13181 Beta vulgaris HOM05D001598 ORTHO05D002757 8.2e-34 147.9 161 52.8
PSO017G4006 Papaver somniferum HOM05D001598 ORTHO05D002757 1.1e-33 147.5 183 47.0
Psat2g121440 Pisum sativum HOM05D001598 ORTHO05D002757 1.1e-33 147.5 154 51.3
Sp2g13960 Schrenkiella parvula HOM05D001598 ORTHO05D002757 1.1e-33 147.5 157 52.2
Aa31LG2G7420 Aethionema arabicum HOM05D001598 ORTHO05D002757 1.4e-33 147.1 156 51.3
PSO478G0282 Papaver somniferum HOM05D001598 ORTHO05D002757 2.4e-33 146.4 183 46.4
Sopen01g006220 Solanum pennellii HOM05D001598 ORTHO05D002757 2.4e-33 146.4 178 48.9
arahy.Tifrunner.gnm1.ann1.BUM29L Arachis hypogaea HOM05D001598 ORTHO05D002757 3.1e-33 146.0 173 47.4
Ca_04769_v3 Cicer arietinum L. HOM05D001598 ORTHO05D002757 3.1e-33 146.0 159 52.8
Ca_30734_v3 Cicer arietinum L. HOM05D001598 ORTHO05D002757 3.1e-33 146.0 159 52.8
Solyc01g010570.4 Solanum lycopersicum HOM05D001598 ORTHO05D002757 3.1e-33 146.0 178 48.9
AT2G02880 Arabidopsis thaliana HOM05D001598 ORTHO05D002757 4.1e-33 145.6 158 51.9
Thhalv10004617m.g Eutrema salsugineum HOM05D001598 ORTHO05D002757 4.1e-33 145.6 152 53.3
Hund25254 Selenicereus undatus HOM05D001598 ORTHO05D002757 5.3e-33 145.2 170 49.4
MD16G1075100 Malus domestica HOM05D001598 ORTHO05D002757 9.0e-33 144.4 161 54.0
PGR119G0480 Punica granatum HOM05D001598 ORTHO05D002757 9.0e-33 144.4 166 50.6
AUR62028804 Chenopodium quinoa HOM05D001598 ORTHO05D002757 1.2e-32 144.1 144 58.3
Migut.L01310 Erythranthe guttata HOM05D001598 ORTHO05D002757 1.2e-32 144.1 182 49.5
BraA02t08340Z Brassica rapa HOM05D001598 ORTHO05D002757 1.5e-32 143.7 155 51.6
unitig_22.g6913 Utricularia gibba HOM05D001598 ORTHO05D001528 1.5e-32 143.7 165 52.7
Phvul.002G086800 Phaseolus vulgaris HOM05D001598 ORTHO05D002757 2.0e-32 143.3 155 49.7
MSTRG.691 Avicennia marina HOM05D001598 ORTHO05D002757 2.6e-32 142.9 156 53.8
FvH4_4g31560 Fragaria vesca HOM05D001598 ORTHO05D002757 4.5e-32 142.1 170 49.4
A02p33170 Brassica napus HOM05D001598 ORTHO05D002757 5.9e-32 141.7 155 51.6
SGA_v2.0_scaffold53G19414 Striga asiatica HOM05D001598 ORTHO05D002757 2.2e-31 139.8 172 54.7
Lsat_1_v5_gn_8_4521 Lactuca sativa HOM05D001598 ORTHO05D002757 1.4e-30 137.1 164 48.2
Glyma.02G105700 Glycine max HOM05D001598 ORTHO05D002757 2.5e-30 136.3 152 50.0
FAN12G4270 Fragaria x ananassa HOM05D001598 ORTHO05D002757 3.2e-30 136.0 175 46.9
Cpa.g.sc1763.1 Carica papaya HOM05D001598 ORTHO05D002757 4.2e-30 135.6 150 51.3
BcaB07g30318 Brassica carinata HOM05D001598 ORTHO05D002757 5.5e-30 135.2 153 49.0
Oeu013623.1 Olea europaea HOM05D001598 ORTHO05D002757 5.5e-30 135.2 146 54.8
BcaC03g17175 Brassica carinata HOM05D001598 ORTHO05D002757 9.4e-30 134.4 152 50.0
Sc11g0001820 Simmondsia chinensis HOM05D001598 ORTHO05D002757 2.7e-29 132.9 169 46.7
C02p50980 Brassica napus HOM05D001598 ORTHO05D002757 3.6e-29 132.5 152 49.3
THA.LOC104805152 Tarenaya hassleriana HOM05D001598 ORTHO05D002757 3.6e-29 132.5 148 54.7
Lj3C1039T11 Lonicera japonica HOM05D001598 ORTHO05D002757 4.6e-29 132.1 150 50.0
Os03g0379400 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D002757 4.6e-29 132.1 184 44.6
BolC2t11190H Brassica oleracea HOM05D001598 ORTHO05D002757 6.1e-29 131.7 152 49.3
CARHR145320 Cardamine hirsuta HOM05D001598 ORTHO05D002757 6.1e-29 131.7 152 49.3
CANSAT64G1213 Cannabis sativa HOM05D001598 ORTHO05D002757 7.9e-29 131.3 160 48.8
Peaxi162Scf00026g03113 Petunia axillaris HOM05D001598 ORTHO05D002757 1.0e-28 131.0 136 51.5
VMungo1215G3305 Vigna mungo HOM05D001598 ORTHO05D002757 3.0e-28 129.4 155 47.1
Ah.02g131210 Amaranthus hybridus HOM05D001645 ORTHO05D002757 4.3e-27 125.6 154 50.6
Rhsim12G0061700 Rhododendron simsii HOM05D001645 ORTHO05D002757 5.7e-27 125.2 156 48.1
HPP92_016914 Vanilla planifolia HOM05D001598 ORTHO05D002757 5.7e-27 125.2 158 48.1
SGA_v2.0_scaffold4653G54517 Striga asiatica HOM05D001598 ORTHO05D002757 6.3e-26 121.7 167 50.3
Eucgr.G02513 Eucalyptus grandis HOM05D001598 ORTHO05D002757 1.4e-25 120.6 174 46.6
AUR62005754 Chenopodium quinoa HOM05D001598 ORTHO05D002757 1.8e-25 120.2 160 50.0
RcHm_v2.0_Chr4g0440071 Rosa chinensis HOM05D001598 ORTHO05D002757 2.2e-23 113.2 173 45.1
Zm00001eb392280 Zea mays HOM05D001598 ORTHO05D002757 8.5e-23 111.3 184 40.8
CiPaw.05G137200 Carya illinoinensis HOM05D001598 ORTHO05D002757 9.1e-17 91.3 107 48.6
SEGI_27969 Sequoiadendron giganteum HOM05D001598 ORTHO05D002757 1.2e-13 80.9 158 32.9
PGSC0003DMG400009618 Solanum tuberosum HOM05D001598 ORTHO05D002757 2.7e-13 79.7 106 49.1
FAN17G2100 Fragaria x ananassa HOM05D001598 ORTHO05D010176 5.7e-11 72.0 66 56.1
Os01g0801700 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D002757 3.8e-07 59.3 179 29.1
Haze_00082 Corylus avellana HOM05D001598 ORTHO05D002757 6.5e-07 58.5 47 57.4
Cpa.g.sc48.118 Carica papaya HOM05D001598 ORTHO05D002757 1.1e-06 57.8 51 52.9
Glyma.09G051800 Glycine max HOM05D001598 ORTHO05D002757 1.1e-06 57.8 51 52.9
Glyma.15G158100 Glycine max HOM05D001598 ORTHO05D002757 1.1e-06 57.8 51 52.9
Aqoxy7G03836 Aquilegia oxysepala HOM05D001598 ORTHO05D002757 1.9e-06 57.0 51 52.9
CSS0038856 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D002757 1.9e-06 57.0 51 52.9
Actinidia36797 Actinidia chinensis HOM05D001598 ORTHO05D002757 2.5e-06 56.6 51 52.9
Cfa015220 Carpinus fangiana HOM05D001598 ORTHO05D002757 2.5e-06 56.6 193 24.4
MD03G1229800 Malus domestica HOM05D001598 ORTHO05D002757 2.5e-06 56.6 51 52.9
Nn7g37454 Nelumbo nucifera HOM05D001598 ORTHO05D002757 2.5e-06 56.6 51 51.0
CDE03G0379 Ceratophyllum demersum HOM05D001598 ORTHO05D002757 3.2e-06 56.2 51 52.9
CAN.G1156.51 Capsicum annuum HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Ciclev10020578m.g Citrus clementina HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Dinv44166 Davidia involucrata HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
MD10G1276700 Malus domestica HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
MD11G1250300 Malus domestica HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Nitab4.5_0000496g0060 Nicotiana tabacum HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Prupe.4G179500 Prunus persica HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Rhsim12G0173100 Rhododendron simsii HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Solyc05g056510.3 Solanum lycopersicum HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
Sopen05g034910 Solanum pennellii HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
GSVIVG01038094001 Vitis vinifera HOM05D001598 ORTHO05D002757 4.2e-06 55.8 51 51.0
ATR0757G133 Amborella trichopoda HOM05D001598 ORTHO05D002757 5.5e-06 55.5 51 51.0
MSTRG.21240 Avicennia marina HOM05D001598 ORTHO05D002757 5.5e-06 55.5 150 30.0
Nn1g09429 Nelumbo nucifera HOM05D001598 ORTHO05D002757 5.5e-06 55.5 51 51.0
THA.LOC104820518 Tarenaya hassleriana HOM05D001598 ORTHO05D002757 5.5e-06 55.5 51 51.0
CDE06G0993 Ceratophyllum demersum HOM05D001598 ORTHO05D002757 7.2e-06 55.1 51 51.0
Eucgr.H00336 Eucalyptus grandis HOM05D001598 ORTHO05D002757 7.2e-06 55.1 51 51.0
TPR.G31851 Trifolium pratense HOM05D001598 ORTHO05D002757 9.4e-06 54.7 51 51.0


User provided reference genes

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