Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.2e-246 855.9 403 100.0
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.9e-234 815.5 403 95.3
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 2.0e-175 619.4 374 75.1
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 4.4e-175 618.2 369 74.5
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 2.2e-174 615.9 378 73.3
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 1.8e-173 612.8 371 72.2
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 2.4e-173 612.5 369 73.4
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 5.3e-173 611.3 371 73.3
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 9.1e-173 610.5 369 74.0
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 1.2e-172 610.1 371 74.9
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 1.2e-172 610.1 372 74.5
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 1.6e-172 609.8 369 72.6
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 2.0e-172 609.4 371 73.3
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 2.7e-172 609.0 373 73.5
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 2.7e-172 609.0 370 74.9
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 3.5e-172 608.6 373 75.6
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 7.7e-172 607.4 371 74.1
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 1.0e-171 607.1 378 73.0
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 1.3e-171 606.7 370 72.7
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 1.7e-171 606.3 376 72.9
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 3.8e-171 605.1 370 73.0
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.1e-170 603.6 370 71.9
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 1.1e-170 603.6 369 74.5
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 1.9e-170 602.8 380 71.3
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.2e-170 602.1 370 71.9
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 4.2e-170 601.7 373 74.5
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 5.5e-170 601.3 371 72.2
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 5.5e-170 601.3 373 74.5
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 7.2e-170 600.9 378 72.5
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 7.2e-170 600.9 369 71.3
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 7.2e-170 600.9 368 75.5
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 1.6e-169 599.7 370 72.4
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.6e-169 599.7 371 73.0
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 2.1e-169 599.4 372 72.8
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 2.1e-169 599.4 370 74.1
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 2.7e-169 599.0 374 72.5
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 3.6e-169 598.6 367 72.5
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 3.6e-169 598.6 369 73.2
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 3.6e-169 598.6 370 72.2
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 4.7e-169 598.2 371 72.8
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 4.7e-169 598.2 371 74.4
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 6.1e-169 597.8 370 72.4
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 6.1e-169 597.8 369 73.7
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 6.1e-169 597.8 376 72.1
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 8.0e-169 597.4 369 72.4
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 1.8e-168 596.3 371 72.5
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 1.8e-168 596.3 368 71.7
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 4.0e-168 595.1 403 68.7
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 4.0e-168 595.1 371 73.3
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 6.8e-168 594.3 371 73.6
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 8.8e-168 594.0 367 71.1
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 8.8e-168 594.0 371 72.2
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.0e-167 592.8 367 70.8
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 4.4e-167 591.7 380 71.6
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 4.4e-167 591.7 371 71.7
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 5.7e-167 591.3 370 71.4
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 7.5e-167 590.9 369 71.5
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 6.3e-166 587.8 375 68.8
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 6.3e-166 587.8 368 70.7
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 8.3e-166 587.4 372 70.2
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 5.4e-165 584.7 368 70.9
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 9.1e-165 583.9 371 70.9
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 9.1e-165 583.9 368 71.2
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 1.2e-164 583.6 369 72.1
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.6e-164 583.2 368 71.5
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 2.0e-164 582.8 370 70.5
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 4.5e-164 581.6 372 69.6
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 1.0e-163 580.5 369 71.0
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 1.7e-163 579.7 368 70.1
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 6.5e-163 577.8 370 67.8
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 1.1e-162 577.0 369 71.5
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 1.1e-162 577.0 372 70.2
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.5e-162 576.6 368 70.7
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 1.9e-162 576.2 376 69.1
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 4.2e-162 575.1 368 70.1
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 7.2e-162 574.3 369 70.5
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 2.1e-161 572.8 369 69.9
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 4.7e-161 571.6 373 68.4
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 4.7e-161 571.6 371 69.0
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 6.1e-161 571.2 369 69.1
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 8.0e-161 570.9 379 68.6
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 1.0e-160 570.5 371 68.5
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 8.8e-160 567.4 374 67.4
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 1.2e-159 567.0 376 69.1
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 1.2e-159 567.0 369 67.8
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 4.4e-159 565.1 375 66.9
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 1.3e-158 563.5 373 68.4
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 2.2e-158 562.8 370 68.1
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 2.2e-158 562.8 426 63.1
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 2.2e-158 562.8 370 69.5
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 2.8e-158 562.4 375 66.9
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 1.8e-157 559.7 376 66.2
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 1.8e-157 559.7 375 66.4
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 2.0e-156 556.2 368 69.0
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 2.0e-156 556.2 370 67.3
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.7e-156 555.8 345 74.8
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 1.0e-155 553.9 408 64.5
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 6.6e-155 551.2 405 62.5
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 6.6e-155 551.2 352 69.0
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 8.6e-155 550.8 381 66.7
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 1.0e-152 543.9 463 57.0
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 1.5e-151 540.0 368 67.4
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 1.5e-151 540.0 358 68.4
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 4.4e-151 538.5 376 65.2
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 7.5e-151 537.7 377 65.5
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 1.7e-150 536.6 374 66.3
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 8.3e-150 534.3 381 63.5
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 3.2e-149 532.3 370 65.4
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 9.2e-149 530.8 369 64.5
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 9.2e-149 530.8 316 73.7
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 4.6e-148 528.5 370 64.3
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.0e-147 527.3 367 64.6
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.9e-146 523.1 405 63.0
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 2.5e-146 522.7 420 58.6
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 2.2e-142 509.6 378 62.2
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 1.7e-139 500.0 308 74.7
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 1.1e-138 497.3 370 61.1
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 2.9e-134 482.6 391 58.1
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 7.1e-133 478.0 286 73.1
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 6.9e-120 434.9 278 70.5
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 9.9e-119 431.0 368 57.9
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 4.2e-101 372.5 344 55.2
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 6.0e-100 368.6 380 49.5
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.5e-93 346.7 385 46.0
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 2.7e-92 343.2 218 70.6
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.0e-91 341.3 384 46.1
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 8.2e-89 331.6 240 62.5
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 9.0e-88 328.2 222 66.7
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 1.0e-86 324.7 403 43.9
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.2e-85 319.3 231 61.9
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 3.8e-78 296.2 370 43.0
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 5.5e-77 292.4 231 58.9
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.1e-72 276.2 165 69.7
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 2.6e-71 273.5 173 71.1
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 1.4e-59 234.6 171 66.7
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 3.3e-45 186.8 475 28.2
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 8.3e-41 172.2 91 80.2
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 1.8e-35 154.5 364 31.0
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 3.5e-31 140.2 156 50.6
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 1.9e-29 134.4 94 62.8
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 5.6e-29 132.9 94 61.7
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 1.5e-26 124.8 84 70.2
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 1.0e-22 112.1 92 60.9
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 2.7e-15 87.4 43 88.4
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 6.0e-15 86.3 163 34.4
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 3.9e-14 83.6 47 80.9
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 5.6e-13 79.7 46 73.9
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 3.6e-12 77.0 157 33.8
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 2.4e-08 64.3 39 76.9
CDE07G1693 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 6.0e-07 59.7 50 58.0
RcHm_v2.0_Chr4g0407271 Rosa chinensis HOM05D004692 ORTHO05D342244 5.1e-06 56.6 28 85.7


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