Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1620 Ceratophyllum demersum HOM05D002787 ORTHO05D003506 7.1e-44 180.3 94 100.0
CDE07G1018 Ceratophyllum demersum HOM05D002787 ORTHO05D003506 9.0e-15 83.6 93 51.6
TAR369G0263 Trochodendron aralioides HOM05D002787 ORTHO05D003506 4.2e-12 74.7 80 48.8
LjContig00357g0017303 Lotus japonicus HOM05D002787 ORTHO05D003506 2.3e-10 68.9 93 41.9
CiPaw.01G303100 Carya illinoinensis HOM05D002787 ORTHO05D003506 3.0e-10 68.6 93 40.9
Lalb_Chr04g0250341 Lupinus albus HOM05D002787 ORTHO05D003506 3.0e-10 68.6 93 41.9
VMungo0647G0953 Vigna mungo HOM05D002787 ORTHO05D003506 3.0e-10 68.6 93 41.9
Potri.008G074800 Populus trichocarpa HOM05D002787 ORTHO05D003506 3.9e-10 68.2 93 41.9
Solyc06g050720.3 Solanum lycopersicum HOM05D002787 ORTHO05D003506 3.9e-10 68.2 94 40.4
arahy.Tifrunner.gnm1.ann1.2Y6RK6 Arachis hypogaea HOM05D002787 ORTHO05D003506 5.1e-10 67.8 93 40.9
arahy.Tifrunner.gnm1.ann1.RB5H3E Arachis hypogaea HOM05D002787 ORTHO05D003506 5.1e-10 67.8 93 40.9
Gohir.D06G165800 Gossypium hirsutum HOM05D002787 ORTHO05D003506 5.1e-10 67.8 88 43.2
Gorai.010G193300 Gossypium raimondii HOM05D002787 ORTHO05D003506 5.1e-10 67.8 88 43.2
Sabra10G0139900 Salix brachista HOM05D002787 ORTHO05D003506 5.1e-10 67.8 93 40.9
Lju41A22G19 Lonicera japonica HOM05D002787 ORTHO05D003506 6.7e-10 67.4 94 40.4
Cc02_g05810 Coffea canephora HOM05D002787 ORTHO05D003506 8.8e-10 67.0 93 41.9
Glyma.02G260600 Glycine max HOM05D002787 ORTHO05D003506 8.8e-10 67.0 93 40.9
MD01G1160800 Malus domestica HOM05D002787 ORTHO05D003506 8.8e-10 67.0 86 40.7
Sopen06g016280 Solanum pennellii HOM05D002787 ORTHO05D003506 8.8e-10 67.0 94 39.4
TAR369G0379 Trochodendron aralioides HOM05D002787 ORTHO05D003506 8.8e-10 67.0 95 38.9
MSTRG.27293 Avicennia marina HOM05D002787 ORTHO05D003506 1.1e-09 66.6 93 40.9
Cpa.g.sc19.108 Carica papaya HOM05D002787 ORTHO05D003506 1.1e-09 66.6 93 40.9
Lj8A59T33 Lonicera japonica HOM05D002787 ORTHO05D003506 1.1e-09 66.6 94 40.4
Phvul.008G219500 Phaseolus vulgaris HOM05D002787 ORTHO05D003506 1.1e-09 66.6 93 40.9
Dinv10567 Davidia involucrata HOM05D002787 ORTHO05D003506 1.5e-09 66.2 93 40.9
ATR0594G145 Amborella trichopoda HOM05D002787 ORTHO05D003506 2.0e-09 65.9 93 41.9
Manes.10G007000 Manihot esculenta HOM05D002787 ORTHO05D003506 2.0e-09 65.9 93 39.8
Rhsim03G0149000 Rhododendron simsii HOM05D002787 ORTHO05D003506 2.0e-09 65.9 94 40.4
CSS0023990 Camellia sinensis var. sinensis HOM05D002787 ORTHO05D003506 2.5e-09 65.5 94 41.5
CSS0041964 Camellia sinensis var. sinensis HOM05D002787 ORTHO05D003506 2.5e-09 65.5 94 41.5
MBI15_g23055_MAGBIO Magnolia biondii HOM05D002787 ORTHO05D003506 2.5e-09 65.5 94 42.6
DCAR_011866 Daucus carota HOM05D002787 ORTHO05D003506 3.3e-09 65.1 94 38.3
Psat2g029160 Pisum sativum HOM05D002787 ORTHO05D003506 3.3e-09 65.1 93 40.9
Potri.010G182500 Populus trichocarpa HOM05D002787 ORTHO05D003506 3.3e-09 65.1 93 40.9
Sabra08G0055400 Salix brachista HOM05D002787 ORTHO05D003506 3.3e-09 65.1 93 39.8
Thecc.10G008400 Theobroma cacao HOM05D002787 ORTHO05D003506 3.3e-09 65.1 93 39.8
TWI09G0137 Tripterygium wilfordii HOM05D002787 ORTHO05D003506 3.3e-09 65.1 91 40.7
Actinidia29736 Actinidia chinensis HOM05D002787 ORTHO05D003506 4.3e-09 64.7 95 40.0
CAN.G2493.1 Capsicum annuum HOM05D002787 ORTHO05D003506 4.3e-09 64.7 94 38.3
CAN.G256.5 Capsicum annuum HOM05D002787 ORTHO05D003506 4.3e-09 64.7 94 38.3
COL.COLO4_25814 Corchorus olitorius HOM05D002787 ORTHO05D003506 4.3e-09 64.7 94 39.4
Nitab4.5_0002854g0060 Nicotiana tabacum HOM05D002787 ORTHO05D003506 4.3e-09 64.7 94 38.3
Oeu008080.1 Olea europaea HOM05D002787 ORTHO05D003506 4.3e-09 64.7 93 38.7
PGSC0003DMG400017899 Solanum tuberosum HOM05D002787 ORTHO05D003506 4.3e-09 64.7 94 38.3
Nitab4.5_0001291g0040 Nicotiana tabacum HOM05D002787 ORTHO05D003506 5.7e-09 64.3 94 38.3
Atru.chr12.133 Acer truncatum HOM05D002787 ORTHO05D003506 7.4e-09 63.9 91 38.5
CSS0025620 Camellia sinensis var. sinensis HOM05D002787 ORTHO05D003506 7.4e-09 63.9 94 41.5
Duzib114G0720 Durio zibethinus HOM05D002787 ORTHO05D003506 7.4e-09 63.9 94 39.4
Gohir.A06G160000 Gossypium hirsutum HOM05D002787 ORTHO05D003506 7.4e-09 63.9 88 40.9
PSO611G0002 Papaver somniferum HOM05D002787 ORTHO05D003506 7.4e-09 63.9 73 45.2
ClCG07G004750 Citrullus lanatus HOM05D002787 ORTHO05D003506 9.7e-09 63.5 95 38.9
Sc10g0002780 Simmondsia chinensis HOM05D002787 ORTHO05D003506 1.3e-08 63.2 93 38.7
EL10Ac2g04305 Beta vulgaris HOM05D002787 ORTHO05D003506 1.7e-08 62.8 93 37.6
QL08p064095 Quercus lobata HOM05D002787 ORTHO05D003506 1.7e-08 62.8 93 37.6
QL08p064114 Quercus lobata HOM05D002787 ORTHO05D003506 1.7e-08 62.8 93 37.6
QL08p064135 Quercus lobata HOM05D002787 ORTHO05D003506 1.7e-08 62.8 93 37.6
SGA_v2.0_scaffold44G16649 Striga asiatica HOM05D002787 ORTHO05D003506 1.7e-08 62.8 94 37.2
SHI28867 Sapria himalayana HOM05D002787 ORTHO05D003506 2.2e-08 62.4 84 41.7
Ca_06011_v3 Cicer arietinum L. HOM05D002787 ORTHO05D003506 2.8e-08 62.0 92 40.2
Cfa001244 Carpinus fangiana HOM05D002787 ORTHO05D003506 3.7e-08 61.6 95 35.8
Manes.07G136500 Manihot esculenta HOM05D002787 ORTHO05D003506 3.7e-08 61.6 93 38.7
GSVIVG01032729001 Vitis vinifera HOM05D002787 ORTHO05D003506 3.7e-08 61.6 93 38.7
AUR62012324 Chenopodium quinoa HOM05D002787 ORTHO05D003506 4.8e-08 61.2 93 38.7
Prupe.2G258400 Prunus persica HOM05D002787 ORTHO05D003506 4.8e-08 61.2 76 43.4
Hund15864 Selenicereus undatus HOM05D002787 ORTHO05D003506 4.8e-08 61.2 91 39.6
Migut.F00615 Erythranthe guttata HOM05D002787 ORTHO05D003506 6.3e-08 60.8 93 36.6
PSO017G1323 Papaver somniferum HOM05D002787 ORTHO05D003506 6.3e-08 60.8 82 40.2
Ah.10g036070 Amaranthus hybridus HOM05D002787 ORTHO05D003506 8.2e-08 60.5 103 37.9
TPR.G20190 Trifolium pratense HOM05D002787 ORTHO05D003506 8.2e-08 60.5 93 38.7
Zm00001eb123360 Zea mays HOM05D002787 ORTHO05D003506 8.2e-08 60.5 97 34.0
unitig_88.g27822 Utricularia gibba HOM05D002787 ORTHO05D003506 1.1e-07 60.1 91 36.3
Oeu008079.1 Olea europaea HOM05D002787 ORTHO05D003506 1.4e-07 59.7 93 37.6
Atru.chr12.132 Acer truncatum HOM05D002787 ORTHO05D003506 1.8e-07 59.3 93 35.5
MD07G1228600 Malus domestica HOM05D002787 ORTHO05D003506 1.8e-07 59.3 93 34.4
SalBow3G2057 Salvia bowleyana HOM05D002787 ORTHO05D003506 1.8e-07 59.3 94 35.1
AUR62022966 Chenopodium quinoa HOM05D002787 ORTHO05D003506 2.4e-07 58.9 93 37.6
Ciclev10032052m.g Citrus clementina HOM05D002787 ORTHO05D003506 2.4e-07 58.9 91 37.4
Aqoxy4G02183 Aquilegia oxysepala HOM05D002787 ORTHO05D003506 3.1e-07 58.5 97 35.1
BcaC02g12156 Brassica carinata HOM05D002787 ORTHO05D003506 3.1e-07 58.5 75 41.3
Carub.0005s2295 Capsella rubella HOM05D002787 ORTHO05D003506 3.1e-07 58.5 93 34.4
Haze_17308 Corylus avellana HOM05D002787 ORTHO05D003506 3.1e-07 58.5 104 34.6
Os01g0166100 Oryza sativa ssp. japonica HOM05D002787 ORTHO05D003506 3.1e-07 58.5 95 35.8
Prupe.2G258500 Prunus persica HOM05D002787 ORTHO05D003506 3.1e-07 58.5 93 35.5
Eucgr.J00158 Eucalyptus grandis HOM05D002787 ORTHO05D017510 4.1e-07 58.2 38 65.8
FvH4_7g25420 Fragaria vesca HOM05D002787 ORTHO05D003506 4.1e-07 58.2 93 34.4
THA.LOC104811876 Tarenaya hassleriana HOM05D002787 ORTHO05D003506 4.1e-07 58.2 93 37.6
HPP92_001133 Vanilla planifolia HOM05D002787 ORTHO05D003506 4.1e-07 58.2 92 37.0
CsaV3_5G010670 Cucumis sativus L. HOM05D002787 ORTHO05D003506 5.3e-07 57.8 95 36.8
FAN01G2059 Fragaria x ananassa HOM05D002787 ORTHO05D003506 5.3e-07 57.8 93 34.4
PGR044G1828 Punica granatum HOM05D002787 ORTHO05D003506 5.3e-07 57.8 93 38.7
PGR044G1940 Punica granatum HOM05D002787 ORTHO05D003506 5.3e-07 57.8 92 39.1
Medtr5g083720 Medicago truncatula HOM05D002787 ORTHO05D003506 6.9e-07 57.4 94 37.2
Haze_17309 Corylus avellana HOM05D002787 ORTHO05D003506 9.1e-07 57.0 93 35.5
Haze_17314 Corylus avellana HOM05D002787 ORTHO05D003506 9.1e-07 57.0 93 37.6
HanXRQChr09g0252181 Helianthus annuus HOM05D002787 ORTHO05D003506 9.1e-07 57.0 94 36.2
Sed0006213 Sechium edule HOM05D002787 ORTHO05D003506 9.1e-07 57.0 95 33.7
BraA05t19570Z Brassica rapa HOM05D002787 ORTHO05D003506 1.2e-06 56.6 94 36.2
CARHR135520 Cardamine hirsuta HOM05D002787 ORTHO05D003506 1.2e-06 56.6 93 35.5
Gorai.011G292900 Gossypium raimondii HOM05D002787 ORTHO05D003506 1.2e-06 56.6 93 35.5
QL08p064105 Quercus lobata HOM05D002787 ORTHO05D003506 1.2e-06 56.6 38 57.9
QL08p064143 Quercus lobata HOM05D002787 ORTHO05D003506 1.2e-06 56.6 38 57.9
QL08p064169 Quercus lobata HOM05D002787 ORTHO05D003506 1.2e-06 56.6 38 57.9
QL08p064185 Quercus lobata HOM05D002787 ORTHO05D003506 1.2e-06 56.6 38 57.9
Hund13521 Selenicereus undatus HOM05D002787 ORTHO05D003506 1.2e-06 56.6 38 60.5
ECA238G4654 Erigeron canadensis HOM05D002787 ORTHO05D003506 1.5e-06 56.2 95 34.7
Eucgr.J00160 Eucalyptus grandis HOM05D002787 ORTHO05D003506 1.5e-06 56.2 93 35.5
vmacro06914 Vaccinium macrocarpon HOM05D002787 ORTHO05D003506 1.5e-06 56.2 38 60.5
C04p06990 Brassica napus HOM05D002787 ORTHO05D003506 2.0e-06 55.8 94 35.1
BolC4t22320H Brassica oleracea HOM05D002787 ORTHO05D003506 2.0e-06 55.8 94 35.1
CANSAT56G2981 Cannabis sativa HOM05D002787 ORTHO05D003506 2.0e-06 55.8 93 33.3
MELO3C020101.2 Cucumis melo HOM05D002787 ORTHO05D003506 2.0e-06 55.8 95 35.8
Medtr5g083730 Medicago truncatula HOM05D002787 ORTHO05D003506 2.0e-06 55.8 93 35.5
A05p06070 Brassica napus HOM05D002787 ORTHO05D003506 3.4e-06 55.1 94 35.1
Dinv21803 Davidia involucrata HOM05D002787 ORTHO05D003506 3.4e-06 55.1 93 35.5
Gohir.D10G252560 Gossypium hirsutum HOM05D002787 ORTHO05D017510 3.4e-06 55.1 38 60.5
Lsat_1_v5_gn_2_125840 Lactuca sativa HOM05D002787 ORTHO05D003506 3.4e-06 55.1 95 35.8
RcHm_v2.0_Chr1g0371391 Rosa chinensis HOM05D002787 ORTHO05D003506 3.4e-06 55.1 93 33.3
AL5G37490 Arabidopsis lyrata HOM05D002787 ORTHO05D003506 4.5e-06 54.7 93 34.4
Eucgr.J00161 Eucalyptus grandis HOM05D002787 ORTHO05D003506 4.5e-06 54.7 93 36.6
Gohir.A10G240300 Gossypium hirsutum HOM05D002787 ORTHO05D003506 5.9e-06 54.3 93 35.5
HanXRQChr07g0203541 Helianthus annuus HOM05D002787 ORTHO05D003506 5.9e-06 54.3 94 31.9
Thecc.04G020600 Theobroma cacao HOM05D002787 ORTHO05D003506 5.9e-06 54.3 38 57.9


User provided reference genes

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