Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.8e-111 406.0 211 100.0
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.7e-85 319.7 203 84.2
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 1.4e-36 157.1 234 45.7
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 7.9e-35 151.4 222 45.9
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 1.4e-34 150.6 231 44.6
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 1.3e-32 144.1 212 47.2
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 2.6e-30 136.3 298 36.9
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 4.5e-30 135.6 209 45.9
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 4.5e-30 135.6 206 42.2
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 5.9e-30 135.2 206 41.7
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 2.9e-29 132.9 272 39.0
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 5.0e-29 132.1 264 39.0
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 1.9e-28 130.2 209 44.5
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 3.2e-28 129.4 199 43.2
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 5.5e-28 128.6 202 44.6
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 9.4e-28 127.9 198 47.5
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 1.2e-27 127.5 251 39.4
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.6e-27 127.1 196 46.4
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 2.1e-27 126.7 262 39.3
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 2.1e-27 126.7 246 39.8
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 2.1e-27 126.7 192 47.4
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 2.1e-27 126.7 192 47.4
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 4.7e-27 125.6 301 35.5
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 4.7e-27 125.6 220 41.4
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.4e-26 124.0 236 40.7
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 1.4e-26 124.0 293 37.5
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 1.8e-26 123.6 211 43.1
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 2.3e-26 123.2 196 43.9
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 3.0e-26 122.9 304 35.5
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 3.0e-26 122.9 285 37.2
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 3.0e-26 122.9 193 46.1
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 6.7e-26 121.7 191 46.1
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 8.8e-26 121.3 191 45.5
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 1.1e-25 120.9 194 45.9
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.5e-25 120.6 207 43.0
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 2.6e-25 119.8 223 39.9
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 2.6e-25 119.8 198 44.9
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 4.4e-25 119.0 207 42.5
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 5.7e-25 118.6 281 37.4
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 7.4e-25 118.2 207 42.5
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 9.7e-25 117.9 207 42.5
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 9.7e-25 117.9 239 37.2
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 9.7e-25 117.9 185 42.7
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 1.3e-24 117.5 195 44.6
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.3e-24 117.5 243 35.8
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.3e-24 117.5 243 35.8
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 1.7e-24 117.1 207 42.5
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 2.2e-24 116.7 278 35.3
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 2.8e-24 116.3 204 40.2
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 4.8e-24 115.5 207 42.0
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 8.2e-24 114.8 200 43.0
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 8.2e-24 114.8 201 42.3
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 8.2e-24 114.8 304 34.5
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 8.2e-24 114.8 312 33.3
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 8.2e-24 114.8 194 44.3
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 8.2e-24 114.8 245 38.4
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 1.1e-23 114.4 211 42.7
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.1e-23 114.4 287 36.6
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.8e-23 113.6 200 43.0
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 2.4e-23 113.2 202 41.1
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 2.4e-23 113.2 257 36.6
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 3.1e-23 112.8 114 54.4
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 4.1e-23 112.5 153 45.1
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 4.1e-23 112.5 193 43.0
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 7.0e-23 111.7 190 43.7
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 7.0e-23 111.7 198 40.9
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 7.0e-23 111.7 195 42.1
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 7.0e-23 111.7 190 43.2
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.2e-22 110.9 200 42.0
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.5e-22 110.5 228 37.3
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 2.6e-22 109.8 199 40.2
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 3.5e-22 109.4 181 43.6
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 4.5e-22 109.0 195 41.5
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 5.9e-22 108.6 190 41.1
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 1.3e-21 107.5 201 40.8
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 1.3e-21 107.5 198 39.4
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 2.2e-21 106.7 88 62.5
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 2.9e-21 106.3 88 65.9
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 3.8e-21 105.9 321 32.1
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 3.8e-21 105.9 193 40.4
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 6.5e-21 105.1 88 64.8
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 6.5e-21 105.1 313 31.9
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 8.5e-21 104.8 87 65.5
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 8.5e-21 104.8 132 50.0
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 1.1e-20 104.4 212 37.7
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 1.5e-20 104.0 209 36.4
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 1.9e-20 103.6 186 38.2
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 2.5e-20 103.2 256 33.6
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 2.5e-20 103.2 296 33.8
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 3.2e-20 102.8 192 43.8
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 5.5e-20 102.1 306 32.7
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 5.5e-20 102.1 207 37.2
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 9.4e-20 101.3 314 31.8
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 1.6e-19 100.5 181 42.5
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 1.6e-19 100.5 206 39.3
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 2.1e-19 100.1 330 30.9
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 3.6e-19 99.4 304 32.2
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 8.0e-19 98.2 193 39.4
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 5.2e-18 95.5 113 48.7
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 5.2e-18 95.5 192 35.9
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 1.1e-17 94.4 324 31.8
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.6e-17 93.2 157 43.3
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 2.6e-17 93.2 101 53.5
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 3.3e-17 92.8 210 36.7
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 5.7e-17 92.0 321 31.2
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 7.5e-17 91.7 99 56.6
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 1.4e-15 87.4 322 30.1
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 2.4e-15 86.7 54 75.9
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 4.1e-15 85.9 201 33.8
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 5.3e-15 85.5 141 39.0
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 5.3e-15 85.5 108 46.3
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 1.6e-14 84.0 170 41.2
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 4.5e-14 82.4 88 53.4
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 2.9e-13 79.7 156 41.7
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 3.8e-13 79.3 96 47.9
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 1.5e-12 77.4 158 36.1
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 1.2e-11 74.3 293 29.0
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 1.8e-10 70.5 168 31.0
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 5.7e-09 65.5 105 45.7
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 2.8e-08 63.2 67 47.8
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 2.8e-08 63.2 81 46.9
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 3.7e-08 62.8 113 41.6
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 3.7e-08 62.8 88 45.5
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 7.0e-07 58.5 253 28.9


User provided reference genes

Program Settings