Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0927 Ceratophyllum demersum HOM05D006097 ORTHO05D020391 1.9e-72 275.8 144 100.0
TAR623G0702 Trochodendron aralioides HOM05D006097 ORTHO05D008538 4.9e-36 154.8 135 60.0
Nn2g14836 Nelumbo nucifera HOM05D006097 ORTHO05D008538 5.4e-35 151.4 129 58.9
PSO339G1331 Papaver somniferum HOM05D006097 ORTHO05D008538 2.1e-34 149.4 143 57.3
RcHm_v2.0_Chr1g0324291 Rosa chinensis HOM05D006097 ORTHO05D008538 7.8e-34 147.5 133 56.4
Ah.12g062830 Amaranthus hybridus HOM05D006097 ORTHO05D008538 2.3e-33 146.0 131 58.0
GSVIVG01013488001 Vitis vinifera HOM05D006097 ORTHO05D008538 3.9e-33 145.2 138 58.0
Prupe.2G036100 Prunus persica HOM05D006097 ORTHO05D008538 5.6e-32 141.4 133 57.1
AUR62032650 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.6e-31 139.8 138 57.2
Dinv22036 Davidia involucrata HOM05D006097 ORTHO05D008538 1.6e-31 139.8 133 54.1
AUR62026861 Chenopodium quinoa HOM05D006097 ORTHO05D008538 2.1e-31 139.4 132 59.1
PGR031G1965 Punica granatum HOM05D006097 ORTHO05D008538 6.2e-31 137.9 127 58.3
Actinidia21518 Actinidia chinensis HOM05D006097 ORTHO05D008538 8.1e-31 137.5 134 54.5
CSS0004732 Camellia sinensis var. sinensis HOM05D006097 ORTHO05D008538 8.1e-31 137.5 132 53.8
COL.COLO4_20657 Corchorus olitorius HOM05D006097 ORTHO05D008538 8.1e-31 137.5 136 53.7
QL04p017855 Quercus lobata HOM05D006097 ORTHO05D008538 1.1e-30 137.1 148 51.4
Gohir.D06G184900 Gossypium hirsutum HOM05D006097 ORTHO05D008538 1.8e-30 136.3 132 52.3
Gorai.010G216200 Gossypium raimondii HOM05D006097 ORTHO05D008538 1.8e-30 136.3 132 52.3
MD07G1040200 Malus domestica HOM05D006097 ORTHO05D008538 1.8e-30 136.3 132 49.2
SEGI_19069 Sequoiadendron giganteum HOM05D006097 ORTHO05D008538 1.8e-30 136.3 128 53.9
ATR0745G019 Amborella trichopoda HOM05D006097 ORTHO05D008538 2.4e-30 136.0 103 67.0
Gohir.A06G175000 Gossypium hirsutum HOM05D006097 ORTHO05D008538 4.0e-30 135.2 135 50.4
Phvul.011G206500 Phaseolus vulgaris HOM05D006097 ORTHO05D008538 5.2e-30 134.8 122 55.7
Duzib114G0946 Durio zibethinus HOM05D006097 ORTHO05D008538 6.8e-30 134.4 135 51.1
Sp5g06630 Schrenkiella parvula HOM05D006097 ORTHO05D008538 8.9e-30 134.0 137 53.3
SGA_v2.0_scaffold232G43504 Striga asiatica HOM05D006097 ORTHO05D008538 8.9e-30 134.0 142 50.0
VMungo1127G1548 Vigna mungo HOM05D006097 ORTHO05D008538 8.9e-30 134.0 109 60.6
Sabra03G0146400 Salix brachista HOM05D006097 ORTHO05D008538 1.5e-29 133.3 99 63.6
SalBow6G4726 Salvia bowleyana HOM05D006097 ORTHO05D008538 2.0e-29 132.9 102 59.8
Thecc.10G154600 Theobroma cacao HOM05D006097 ORTHO05D008538 2.0e-29 132.9 136 52.2
Atru.chr7.628 Acer truncatum HOM05D006097 ORTHO05D008538 2.6e-29 132.5 133 51.9
TPR.G17806 Trifolium pratense HOM05D006097 ORTHO05D008538 3.4e-29 132.1 132 51.5
Cc02_g30220 Coffea canephora HOM05D006097 ORTHO05D008538 4.4e-29 131.7 151 51.7
THA.LOC104826726 Tarenaya hassleriana HOM05D006097 ORTHO05D008538 4.4e-29 131.7 137 52.6
Haze_03039 Corylus avellana HOM05D006097 ORTHO05D008538 5.8e-29 131.3 102 61.8
BraA04t16135Z Brassica rapa HOM05D006097 ORTHO05D008538 7.6e-29 131.0 137 51.8
Oeu048573.1 Olea europaea HOM05D006097 ORTHO05D008538 7.6e-29 131.0 104 59.6
Glyma.15G235400 Glycine max HOM05D006097 ORTHO05D008538 9.9e-29 130.6 109 58.7
Nitab4.5_0001621g0010 Nicotiana tabacum HOM05D006097 ORTHO05D008538 9.9e-29 130.6 132 56.8
Potri.003G196300 Populus trichocarpa HOM05D006097 ORTHO05D008538 9.9e-29 130.6 98 64.3
BcaB02g08396 Brassica carinata HOM05D006097 ORTHO05D008538 1.3e-28 130.2 137 51.1
C04p36530 Brassica napus HOM05D006097 ORTHO05D008538 1.3e-28 130.2 137 51.1
BolC4t25143H Brassica oleracea HOM05D006097 ORTHO05D008538 1.3e-28 130.2 137 51.1
CANSAT56G2143 Cannabis sativa HOM05D006097 ORTHO05D008538 1.7e-28 129.8 137 48.2
A04p04190 Brassica napus HOM05D006097 ORTHO05D008538 2.2e-28 129.4 137 51.8
BcaC02g09793 Brassica carinata HOM05D006097 ORTHO05D008538 3.8e-28 128.6 137 50.4
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 3.8e-28 128.6 129 49.6
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 3.8e-28 128.6 98 59.2
Hund13358 Selenicereus undatus HOM05D006097 ORTHO05D008538 3.8e-28 128.6 125 53.6
AL5G37140 Arabidopsis lyrata HOM05D006097 ORTHO05D008538 4.9e-28 128.3 135 49.6
Cfa010917 Carpinus fangiana HOM05D006097 ORTHO05D008538 6.4e-28 127.9 102 60.8
Thhalv10010237m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 6.4e-28 127.9 135 50.4
FAN01G0546 Fragaria x ananassa HOM05D006097 ORTHO05D008538 6.4e-28 127.9 129 49.6
Migut.N01845 Erythranthe guttata HOM05D006097 ORTHO05D008538 1.1e-27 127.1 147 47.6
Lj3g0013868 Lotus japonicus HOM05D006097 ORTHO05D008538 1.4e-27 126.7 108 57.4
HPP92_013975 Vanilla planifolia HOM05D006097 ORTHO05D008538 1.9e-27 126.3 143 45.5
QL04p017846 Quercus lobata HOM05D006097 ORTHO05D008538 2.4e-27 125.9 101 61.4
Sed0002543 Sechium edule HOM05D006097 ORTHO05D008538 2.4e-27 125.9 130 51.5
Carub.0005s2263 Capsella rubella HOM05D006097 ORTHO05D008538 3.2e-27 125.6 125 50.4
Ciclev10004623m.g Citrus clementina HOM05D006097 ORTHO05D008538 4.1e-27 125.2 134 50.7
HanXRQChr04g0113861 Helianthus annuus HOM05D006097 ORTHO05D008538 4.1e-27 125.2 114 52.6
Medtr3g014750 Medicago truncatula HOM05D006097 ORTHO05D008538 5.4e-27 124.8 143 46.9
EL10Ac2g02801 Beta vulgaris HOM05D006097 ORTHO05D008538 7.1e-27 124.4 155 44.5
ClCG05G026810 Citrullus lanatus HOM05D006097 ORTHO05D008538 9.2e-27 124.0 101 60.4
Thhalv10010899m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 9.2e-27 124.0 135 48.9
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 9.2e-27 124.0 106 51.9
CiPaw.14G007600 Carya illinoinensis HOM05D006097 ORTHO05D008538 1.2e-26 123.6 101 57.4
Manes.04G159300 Manihot esculenta HOM05D006097 ORTHO05D008538 1.6e-26 123.2 99 57.6
Sopen08g005450 Solanum pennellii HOM05D006097 ORTHO05D008538 1.6e-26 123.2 138 49.3
CAN.G176.2 Capsicum annuum HOM05D006097 ORTHO05D008538 2.1e-26 122.9 131 53.4
Lalb_Chr19g0132421 Lupinus albus HOM05D006097 ORTHO05D008538 2.1e-26 122.9 133 47.4
MELO3C012474.2 Cucumis melo HOM05D006097 ORTHO05D008538 3.5e-26 122.1 102 59.8
Glyma.13G197200 Glycine max HOM05D006097 ORTHO05D008538 1.7e-25 119.8 136 51.5
Peaxi162Scf00767g00518 Petunia axillaris HOM05D006097 ORTHO05D008538 2.3e-25 119.4 101 60.4
Aa31LG10G10820 Aethionema arabicum HOM05D006097 ORTHO05D008538 3.0e-25 119.0 100 58.0
Psat5g221440 Pisum sativum HOM05D006097 ORTHO05D008538 3.0e-25 119.0 140 45.7
CsaV3_5G036770 Cucumis sativus L. HOM05D006097 ORTHO05D008538 3.9e-25 118.6 102 57.8
Os01g0952700 Oryza sativa ssp. japonica HOM05D006097 ORTHO05D008538 5.1e-25 118.2 133 45.9
ECA236G3136 Erigeron canadensis HOM05D006097 ORTHO05D008538 3.3e-24 115.5 128 46.1
SMO367G1089 Selaginella moellendorffii HOM05D006097 ORTHO05D008538 1.4e-22 110.2 132 41.7
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea HOM05D006097 ORTHO05D008538 5.2e-22 108.2 170 41.2
SEGI_33421 Sequoiadendron giganteum HOM05D006097 ORTHO05D020391 6.9e-22 107.8 105 52.4
DCAR_031243 Daucus carota HOM05D006097 ORTHO05D020391 9.0e-22 107.5 101 53.5
FAN10G0529 Fragaria x ananassa HOM05D006097 ORTHO05D008538 2.0e-21 106.3 134 44.8
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea HOM05D006097 ORTHO05D008538 3.4e-21 105.5 170 40.6
CARHR165960 Cardamine hirsuta HOM05D006097 ORTHO05D008538 2.9e-20 102.4 142 42.3
Aqoxy2G00367 Aquilegia oxysepala HOM05D006097 ORTHO05D008538 7.8e-18 94.4 75 57.3
Pp3c20_1490 Physcomitrium patens HOM05D006097 ORTHO05D008538 5.1e-17 91.7 104 41.3
Mapoly0021s0162 Marchantia polymorpha HOM05D006097 ORTHO05D008538 1.9e-16 89.7 129 39.5
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 6.2e-15 84.7 108 42.6
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis HOM05D006097 ORTHO05D008538 9.0e-14 80.9 118 33.1
RcHm_v2.0_Chr6g0254811 Rosa chinensis HOM05D006097 ORTHO05D020391 4.5e-13 78.6 57 57.9
MCO06G284 Micromonas commoda HOM05D006097 ORTHO05D008538 4.2e-11 72.0 100 36.0
Eucgr.G03235 Eucalyptus grandis HOM05D006097 ORTHO05D008538 1.2e-10 70.5 140 36.4
Pp3s32_630 Physcomitrium patens HOM05D006097 ORTHO05D008538 3.9e-09 65.5 67 44.8
unitig_52.g17390 Utricularia gibba HOM05D006097 ORTHO05D008538 3.9e-09 65.5 59 52.5
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 3.3e-08 62.4 42 64.3
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 5.6e-08 61.6 108 35.2
Hma1.2p1_0269F.1_g107740 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 1.1e-06 57.4 38 63.2
Hma1.2p1_3244F.1_g334325 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 1.1e-06 57.4 38 63.2
Haze_01792 Corylus avellana HOM05D000242 ORTHO05D000700 1.4e-06 57.0 48 54.2


User provided reference genes

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