Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 9.5e-253 876.3 429 100.0
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 2.2e-193 679.1 420 76.4
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 2.7e-191 672.2 426 74.9
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.8e-190 669.5 426 75.1
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 4.1e-187 658.3 457 69.8
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 4.5e-186 654.8 422 73.2
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 5.9e-186 654.4 422 73.2
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.6e-183 646.4 426 71.6
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 6.1e-183 644.4 426 71.4
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.0e-182 643.7 430 72.1
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 3.0e-182 642.1 420 71.9
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 8.8e-182 640.6 430 71.2
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.1e-181 640.2 426 70.9
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.0e-181 639.4 424 71.7
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 3.3e-181 638.6 430 71.6
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.7e-180 636.3 416 72.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 3.7e-180 635.2 426 71.1
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 3.7e-180 635.2 419 74.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 6.3e-180 634.4 419 71.8
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.4e-179 632.5 418 71.1
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 2.4e-179 632.5 423 71.4
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.1e-179 632.1 422 70.4
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 4.1e-179 631.7 429 69.5
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 4.1e-179 631.7 418 70.6
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 5.3e-179 631.3 422 70.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 5.3e-179 631.3 440 70.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.0e-178 629.4 421 71.0
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.0e-178 629.4 421 71.0
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.6e-178 629.0 419 71.6
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.6e-178 629.0 419 71.8
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.6e-178 629.0 419 71.1
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.4e-178 628.6 429 69.2
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 3.4e-178 628.6 429 68.8
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 7.7e-178 627.5 433 70.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.9e-177 625.5 434 69.1
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 5.0e-177 624.8 430 68.1
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 8.5e-177 624.0 419 71.4
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 3.2e-176 622.1 424 70.5
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 9.4e-176 620.5 425 68.9
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.2e-175 620.2 429 67.1
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 2.7e-175 619.0 424 70.3
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.7e-175 619.0 422 69.7
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 6.1e-175 617.8 434 68.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.0e-174 617.1 427 69.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.8e-174 616.3 419 70.9
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.3e-174 615.9 422 69.4
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 8.8e-174 614.0 423 70.4
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.0e-173 612.8 419 68.7
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.6e-173 612.5 421 69.8
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.6e-173 612.5 421 69.1
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 3.3e-173 612.1 421 69.8
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 4.4e-173 611.7 421 70.1
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 5.7e-173 611.3 421 70.1
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.3e-172 610.1 428 67.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 6.3e-172 607.8 428 66.6
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.1e-171 607.1 423 68.3
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 7.0e-171 604.4 447 65.3
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 9.1e-171 604.0 424 68.9
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 2.0e-170 602.8 427 67.4
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 4.5e-170 601.7 412 70.1
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 5.9e-170 601.3 420 68.1
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 5.0e-169 598.2 465 62.6
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.4e-168 596.7 444 65.8
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 3.2e-168 595.5 423 66.7
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 7.2e-168 594.3 424 67.7
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 7.2e-168 594.3 427 66.7
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.1e-167 592.8 426 67.1
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.1e-167 592.8 426 67.4
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 6.1e-167 591.3 420 68.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.4e-166 590.1 424 67.2
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.4e-166 590.1 414 68.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 3.9e-166 588.6 427 66.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 6.7e-166 587.8 532 57.7
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 1.5e-165 586.6 420 66.2
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 2.6e-165 585.9 418 68.4
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 2.6e-165 585.9 418 68.4
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 4.4e-165 585.1 419 63.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 5.7e-165 584.7 424 64.9
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.8e-163 579.7 430 64.2
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 7.0e-163 577.8 425 65.2
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 7.0e-163 577.8 417 67.4
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.2e-162 577.0 421 65.6
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 2.6e-162 575.9 425 65.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 2.6e-162 575.9 424 65.8
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.6e-162 575.9 425 65.4
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 3.5e-162 575.5 420 65.5
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 3.5e-162 575.5 425 65.4
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 4.5e-162 575.1 425 65.4
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 7.7e-162 574.3 420 67.4
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 3.8e-161 572.0 425 65.2
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 6.5e-161 571.2 418 67.0
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 4.2e-160 568.5 432 63.9
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.2e-160 568.5 424 64.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.5e-160 568.2 425 64.0
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 5.5e-160 568.2 425 64.2
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.5e-160 568.2 424 64.9
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.7e-159 565.8 424 64.6
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 6.1e-159 564.7 425 63.5
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 8.0e-159 564.3 419 67.3
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.0e-158 563.9 421 65.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.0e-158 563.9 419 66.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.4e-155 553.5 435 63.0
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.0e-150 537.3 420 60.5
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 4.5e-146 521.9 430 59.3
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 7.5e-141 504.6 421 58.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.7e-140 503.4 354 68.9
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.4e-139 499.6 434 55.5
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 2.8e-135 486.1 326 71.5
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.0e-129 467.6 423 58.2
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.6e-129 464.9 425 51.5
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 6.4e-124 448.4 297 72.1
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 8.6e-121 438.0 353 61.5
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.8e-118 430.3 268 76.9
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 5.2e-118 428.7 432 52.3
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 6.8e-110 401.7 249 77.9
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 3.2e-107 392.9 350 55.1
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.7e-90 336.7 420 43.8
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 8.7e-89 331.6 195 82.6
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 7.1e-83 312.0 235 61.7
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 3.3e-64 250.0 257 50.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 4.5e-61 239.6 182 63.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.6e-45 188.0 136 65.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.5e-32 142.5 92 72.8
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.0e-28 132.1 90 64.4
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.9e-28 130.6 93 61.3
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 8.9e-25 119.0 85 67.1
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.9e-11 74.7 323 23.8
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 7.3e-11 72.8 90 45.6
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.2e-07 61.2 41 61.0


User provided reference genes

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