Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0723 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 8.2e-53 210.3 120 100.0
CDE07G0856 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 6.7e-47 190.7 118 82.2
Dinv37820 Davidia involucrata HOM05D000276 ORTHO05D006204 1.0e-15 87.0 99 50.5
CSS0009948 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D006204 1.5e-14 83.2 100 49.0
CANSAT56G1386 Cannabis sativa HOM05D000276 ORTHO05D006204 1.5e-14 83.2 116 45.7
AUR62025617 Chenopodium quinoa HOM05D000276 ORTHO05D006204 3.4e-14 82.0 93 53.8
Potri.001G163000 Populus trichocarpa HOM05D000276 ORTHO05D006204 3.4e-14 82.0 117 46.2
MSTRG.22517 Avicennia marina HOM05D000276 ORTHO05D006204 4.4e-14 81.6 116 44.8
PSO724G0674 Papaver somniferum HOM05D000276 ORTHO05D006204 5.7e-14 81.3 123 42.3
RcHm_v2.0_Chr2g0147831 Rosa chinensis HOM05D000276 ORTHO05D006204 5.7e-14 81.3 101 48.5
CAN.G790.61 Capsicum annuum HOM05D000276 ORTHO05D006204 7.5e-14 80.9 100 49.0
Peaxi162Scf00038g02240 Petunia axillaris HOM05D000276 ORTHO05D006204 7.5e-14 80.9 100 49.0
CiPaw.01G211700 Carya illinoinensis HOM05D000276 ORTHO05D006204 9.8e-14 80.5 115 44.3
PGSC0003DMG400009148 Solanum tuberosum HOM05D000276 ORTHO05D006204 9.8e-14 80.5 100 49.0
Phvul.010G123300 Phaseolus vulgaris HOM05D000276 ORTHO05D006204 1.3e-13 80.1 116 44.0
Solyc03g123590.4 Solanum lycopersicum HOM05D000276 ORTHO05D006204 1.3e-13 80.1 100 48.0
vmacro22015 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 1.3e-13 80.1 101 47.5
VMungo0331G0415 Vigna mungo HOM05D000276 ORTHO05D006204 1.3e-13 80.1 116 44.0
QL05p001260 Quercus lobata HOM05D000276 ORTHO05D006204 1.7e-13 79.7 116 44.0
Sp1g40350 Schrenkiella parvula HOM05D000276 ORTHO05D006204 1.7e-13 79.7 102 46.1
PSO135G0530 Papaver somniferum HOM05D000276 ORTHO05D006204 2.2e-13 79.3 93 50.5
Thhalv10012249m.g Eutrema salsugineum HOM05D000276 ORTHO05D006204 2.8e-13 79.0 102 45.1
Thecc.06G129800 Theobroma cacao HOM05D000276 ORTHO05D006204 2.8e-13 79.0 115 43.5
Lj3g0018226 Lotus japonicus HOM05D000276 ORTHO05D006204 3.7e-13 78.6 116 43.1
Sed0020238 Sechium edule HOM05D000276 ORTHO05D006204 3.7e-13 78.6 116 40.5
TAR383G0418 Trochodendron aralioides HOM05D000276 ORTHO05D006204 3.7e-13 78.6 95 49.5
Carub.0001s4314 Capsella rubella HOM05D000276 ORTHO05D006204 4.8e-13 78.2 101 44.6
SalBow6G5970 Salvia bowleyana HOM05D000276 ORTHO05D006204 4.8e-13 78.2 121 43.8
COL.COLO4_30861 Corchorus olitorius HOM05D000276 ORTHO05D006204 6.3e-13 77.8 80 57.5
Oeu059014.1 Olea europaea HOM05D000276 ORTHO05D006204 6.3e-13 77.8 116 42.2
Prupe.3G031200 Prunus persica HOM05D000276 ORTHO05D006204 6.3e-13 77.8 99 48.5
Sopen03g041360 Solanum pennellii HOM05D000276 ORTHO05D006204 6.3e-13 77.8 100 47.0
AT1G53860 Arabidopsis thaliana HOM05D000276 ORTHO05D006204 8.3e-13 77.4 100 45.0
BcaB02g10881 Brassica carinata HOM05D000276 ORTHO05D006204 8.3e-13 77.4 100 45.0
Ciclev10025517m.g Citrus clementina HOM05D000276 ORTHO05D006204 8.3e-13 77.4 93 50.5
Glyma.16G013800 Glycine max HOM05D000276 ORTHO05D006204 8.3e-13 77.4 116 43.1
arahy.Tifrunner.gnm1.ann1.XY28YB Arachis hypogaea HOM05D000276 ORTHO05D006204 1.1e-12 77.0 93 49.5
A06p00740 Brassica napus HOM05D000276 ORTHO05D003951 1.1e-12 77.0 102 45.1
C06p09620 Brassica napus HOM05D000276 ORTHO05D003951 1.1e-12 77.0 102 45.1
BolC6t36034H Brassica oleracea HOM05D000276 ORTHO05D003951 1.1e-12 77.0 102 45.1
CARHR044190 Cardamine hirsuta HOM05D000276 ORTHO05D006204 1.1e-12 77.0 100 45.0
Cfa003463 Carpinus fangiana HOM05D000276 ORTHO05D006204 1.1e-12 77.0 116 43.1
Dinv20385 Davidia involucrata HOM05D000276 ORTHO05D003951 1.1e-12 77.0 118 43.2
Os11g0616300 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D006204 1.1e-12 77.0 78 53.8
TAR624G0068 Trochodendron aralioides HOM05D000276 ORTHO05D006204 1.1e-12 77.0 115 44.3
Atru.chr1.4141 Acer truncatum HOM05D000276 ORTHO05D006204 1.4e-12 76.6 97 47.4
AL1G62570 Arabidopsis lyrata HOM05D000276 ORTHO05D006204 1.4e-12 76.6 100 45.0
BcaC08g43563 Brassica carinata HOM05D000276 ORTHO05D003951 1.4e-12 76.6 102 44.1
MD17G1154200 Malus domestica HOM05D000276 ORTHO05D006204 1.4e-12 76.6 63 65.1
THA.LOC104810585 Tarenaya hassleriana HOM05D000276 ORTHO05D006204 1.4e-12 76.6 95 49.5
MELO3C022698.2 Cucumis melo HOM05D000276 ORTHO05D006204 1.8e-12 76.3 119 40.3
Lsat_1_v5_gn_1_39200 Lactuca sativa HOM05D000276 ORTHO05D006204 1.8e-12 76.3 119 42.9
Atru.chr1.4144 Acer truncatum HOM05D000276 ORTHO05D006204 2.4e-12 75.9 80 56.2
Aqoxy4G00012 Aquilegia oxysepala HOM05D000276 ORTHO05D006204 2.4e-12 75.9 95 48.4
Aqoxy7G04179 Aquilegia oxysepala HOM05D000276 ORTHO05D006204 2.4e-12 75.9 95 48.4
ClCG07G014300 Citrullus lanatus HOM05D000276 ORTHO05D006204 2.4e-12 75.9 118 39.8
Manes.11G012900 Manihot esculenta HOM05D000276 ORTHO05D006204 2.4e-12 75.9 101 47.5
Cc04_g00750 Coffea canephora HOM05D000276 ORTHO05D006204 3.1e-12 75.5 116 39.7
Psat4g165480 Pisum sativum HOM05D000276 ORTHO05D006204 3.1e-12 75.5 99 46.5
BraA06t23308Z Brassica rapa HOM05D000276 ORTHO05D003951 4.1e-12 75.1 99 45.5
BcaB07g33286 Brassica carinata HOM05D000276 ORTHO05D006204 5.4e-12 74.7 100 44.0
C06p15390 Brassica napus HOM05D000276 ORTHO05D003951 5.4e-12 74.7 102 44.1
A05p17850 Brassica napus HOM05D000276 ORTHO05D006204 7.0e-12 74.3 100 44.0
BraA05t20675Z Brassica rapa HOM05D000276 ORTHO05D006204 7.0e-12 74.3 100 44.0
Medtr8g023130 Medicago truncatula HOM05D000276 ORTHO05D006204 7.0e-12 74.3 99 45.5
EL10Ac7g16493 Beta vulgaris HOM05D000276 ORTHO05D006204 9.1e-12 73.9 76 52.6
PGR119G2259 Punica granatum HOM05D000276 ORTHO05D006204 9.1e-12 73.9 63 63.5
Rhsim12G0213200 Rhododendron simsii HOM05D000276 ORTHO05D003951 9.1e-12 73.9 90 47.8
Sabra01G0129700 Salix brachista HOM05D000276 ORTHO05D006204 9.1e-12 73.9 117 44.4
Hund18639 Selenicereus undatus HOM05D000276 ORTHO05D006204 9.1e-12 73.9 103 45.6
BcaC08g44139 Brassica carinata HOM05D000276 ORTHO05D003951 1.2e-11 73.6 100 43.0
Lalb_Chr17g0343241 Lupinus albus HOM05D000276 ORTHO05D006204 1.2e-11 73.6 76 52.6
SEGI_36040 Sequoiadendron giganteum HOM05D000276 ORTHO05D006204 1.2e-11 73.6 98 42.9
CiPaw.02G131200 Carya illinoinensis HOM05D000276 ORTHO05D006204 1.6e-11 73.2 80 52.5
AUR62001408 Chenopodium quinoa HOM05D000276 ORTHO05D006204 1.6e-11 73.2 93 49.5
HanXRQChr10g0312011 Helianthus annuus HOM05D000276 ORTHO05D006204 1.6e-11 73.2 65 58.5
Cpa.g.sc25.189 Carica papaya HOM05D000276 ORTHO05D006204 2.0e-11 72.8 63 63.5
Duzib235G0075 Durio zibethinus HOM05D000276 ORTHO05D006204 2.0e-11 72.8 75 58.7
Lj9C538T3 Lonicera japonica HOM05D000276 ORTHO05D006204 2.0e-11 72.8 80 51.2
Lalb_Chr18g0044871 Lupinus albus HOM05D000276 ORTHO05D006204 2.0e-11 72.8 67 56.7
MD09G1173100 Malus domestica HOM05D000276 ORTHO05D006204 2.0e-11 72.8 63 61.9
Manes.04G150700 Manihot esculenta HOM05D000276 ORTHO05D006204 2.0e-11 72.8 93 47.3
TPR.G8719 Trifolium pratense HOM05D000276 ORTHO05D006204 2.0e-11 72.8 65 60.0
VMungo1309G2546 Vigna mungo HOM05D000276 ORTHO05D006204 2.0e-11 72.8 95 47.4
FAN05G4018 Fragaria x ananassa HOM05D000276 ORTHO05D006204 2.7e-11 72.4 117 41.9
Lj5A30G67 Lonicera japonica HOM05D000276 ORTHO05D006204 2.7e-11 72.4 116 39.7
Phvul.009G261800 Phaseolus vulgaris HOM05D000276 ORTHO05D006204 4.5e-11 71.6 78 53.8
SGA_v2.0_scaffold71G23920 Striga asiatica HOM05D000276 ORTHO05D006204 7.7e-11 70.9 60 63.3
Actinidia24430 Actinidia chinensis HOM05D000276 ORTHO05D003951 1.0e-10 70.5 80 48.8
ECA234G3069 Erigeron canadensis HOM05D000276 ORTHO05D006204 1.0e-10 70.5 66 56.1
Lsat_1_v5_gn_4_92260 Lactuca sativa HOM05D000276 ORTHO05D006204 1.0e-10 70.5 63 57.1
Sed0017728 Sechium edule HOM05D000276 ORTHO05D006204 1.0e-10 70.5 80 50.0
unitig_749.g14034 Utricularia gibba HOM05D000276 ORTHO05D006204 1.7e-10 69.7 74 51.4
Lsat_1_v5_gn_5_137881 Lactuca sativa HOM05D000276 ORTHO05D006204 2.9e-10 68.9 63 57.1
SHI25222 Sapria himalayana HOM05D000276 ORTHO05D006204 2.9e-10 68.9 101 41.6
HPP92_026318 Vanilla planifolia HOM05D000276 ORTHO05D006204 2.9e-10 68.9 102 40.2
Gohir.A10G047611 Gossypium hirsutum HOM05D000276 ORTHO05D006204 6.6e-10 67.8 95 48.4
MBI19_g32870_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D006204 6.6e-10 67.8 91 46.2
Haze_16133 Corylus avellana HOM05D000276 ORTHO05D006204 1.5e-09 66.6 134 37.3
MSTRG.10914 Avicennia marina HOM05D000276 ORTHO05D006204 1.9e-09 66.2 79 50.6
Gorai.011G055400 Gossypium raimondii HOM05D000276 ORTHO05D006204 3.3e-09 65.5 123 39.0
Nitab4.5_0010687g0030 Nicotiana tabacum HOM05D000276 ORTHO05D006204 4.2e-09 65.1 101 42.6
Gohir.D10G051900 Gossypium hirsutum HOM05D000276 ORTHO05D006204 7.2e-09 64.3 95 43.2
CDE06G0894 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 2.1e-08 62.8 63 52.4
FvH4_6g35790 Fragaria vesca HOM05D000276 ORTHO05D006204 2.1e-08 62.8 100 41.0
FAN09G0859 Fragaria x ananassa HOM05D000276 ORTHO05D006204 2.1e-08 62.8 100 41.0
FAN14G2098 Fragaria x ananassa HOM05D000276 ORTHO05D006204 2.1e-08 62.8 100 41.0
FAN14G4808 Fragaria x ananassa HOM05D000276 ORTHO05D006204 2.1e-08 62.8 100 41.0
CDE03G0116 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 6.1e-08 61.2 63 50.8
TWI23G0693 Tripterygium wilfordii HOM05D000276 ORTHO05D006204 1.8e-07 59.7 63 69.8
TAR626G1847 Trochodendron aralioides HOM05D000276 ORTHO05D006204 5.2e-07 58.2 52 63.5
Nn6g35726 Nelumbo nucifera HOM05D000276 ORTHO05D006204 2.0e-06 56.2 100 43.0
Rhsim08G0244500 Rhododendron simsii HOM05D000276 ORTHO05D006204 7.5e-06 54.3 76 40.8


User provided reference genes

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